Examples with MCRObject org.mycore.datamodel.metadata.MCRObject used on opensource projects

Example 51 with MCRObject

use of org.mycore.datamodel.metadata.MCRObject in project mycore by MyCoRe-Org.

the class MCRDOICommands method repairIncompleteRegisteredDOI.

@MCRCommand(syntax = "repair incomplete registered doi {0} with registration service {1}", help = "Use this method if a DOI is registered, but not inserted in the Database. {0} is the DOI and " + "{1} the registration service from configuration.")
public static void repairIncompleteRegisteredDOI(String doiString, String serviceID) throws MCRPersistentIdentifierException, MCRAccessException, MCRActiveLinkException {
    MCRDOIRegistrationService registrationService = new MCRDOIRegistrationService(serviceID);
    MCRDataciteClient dataciteClient = registrationService.getDataciteClient();
    MCRDigitalObjectIdentifier doi = new MCRDOIParser().parse(doiString).orElseThrow(() -> new MCRException("Invalid DOI: " + doiString));
    URI uri = dataciteClient.resolveDOI(doi);
    if (!uri.toString().startsWith(registrationService.getRegisterURL())) {
        LOGGER.info("DOI/URL is not from this application: {}/{}", doi.asString(), uri);
        return;
    }
    MCRObjectID objectID = getObjectID(uri);
    if (!MCRMetadataManager.exists(objectID)) {
        LOGGER.info("Could not find Object : {}", objectID);
        return;
    }
    MCRObject mcrObject = MCRMetadataManager.retrieveMCRObject(objectID);
    MCRPersistentIdentifierMetadataManager<MCRDigitalObjectIdentifier> synchronizer = registrationService.getMetadataManager();
    if (!registrationService.isRegistered(objectID, doiString)) {
        LOGGER.info("{} is not found in PI-Database. Insert it..", objectID);
        registrationService.insertIdentifierToDatabase(mcrObject, "", doi);
    }
    if (!synchronizer.getIdentifier(mcrObject, "").isPresent()) {
        LOGGER.info("Object doesn't have Identifier inscribed! Insert it..");
        synchronizer.insertIdentifier(doi, mcrObject, "");
        MCRMetadataManager.update(mcrObject);
    }
}

Example 52 with MCRObject

use of org.mycore.datamodel.metadata.MCRObject in project mycore by MyCoRe-Org.

the class MCRPIRegistrationService method register.

/**
 * Validates everything, registers a new Identifier, inserts the identifier to object metadata and writes a
 * information to the Database.
 *
 * @param obj the object which has to be identified
 * @param additional additional information for the persistent identifier
 * @param updateObject if true this method calls {@link MCRMetadataManager#update(MCRBase)}
 * @return the assigned Identifier
 * @throws MCRAccessException               the current User doesn't have the rights to insert the Identifier to Metadata
 * @throws MCRActiveLinkException           the {@link MCRPersistentIdentifierMetadataManager} lets
 * {@link org.mycore.datamodel.metadata.MCRMetadataManager#update(MCRObject)} throw this
 * @throws MCRPersistentIdentifierException see {@link org.mycore.pi.exceptions}
 */
public T register(MCRBase obj, String additional, boolean updateObject) throws MCRAccessException, MCRActiveLinkException, MCRPersistentIdentifierException {
    this.validateRegistration(obj, additional);
    T identifier = this.registerIdentifier(obj, additional);
    this.getMetadataManager().insertIdentifier(identifier, obj, additional);
    MCRPI databaseEntry = insertIdentifierToDatabase(obj, additional, identifier);
    addFlagToObject(obj, databaseEntry);
    if (updateObject) {
        if (obj instanceof MCRObject) {
            MCRMetadataManager.update((MCRObject) obj);
        } else if (obj instanceof MCRDerivate) {
            MCRMetadataManager.update((MCRDerivate) obj);
        }
    }
    return identifier;
}

Example 53 with MCRObject

use of org.mycore.datamodel.metadata.MCRObject in project mycore by MyCoRe-Org.

the class MCRPICommands method updateObject.

@MCRCommand(syntax = "update all PI of object {0}", help = "Triggers the update method of every Object!")
public static void updateObject(String objectIDString) {
    MCRObjectID objectID = MCRObjectID.getInstance(objectIDString);
    MCRObject object = MCRMetadataManager.retrieveMCRObject(objectID);
    MCRPersistentIdentifierEventHandler.updateObject(object);
}

Example 54 with MCRObject

use of org.mycore.datamodel.metadata.MCRObject in project mycore by MyCoRe-Org.

the class MCRDOIRegistrationService method updateJob.

@Override
public void updateJob(Map<String, String> parameters) throws MCRPersistentIdentifierException {
    MCRDigitalObjectIdentifier doi = getDOIFromJob(parameters);
    String idString = parameters.get(CONTEXT_OBJ);
    MCRObjectID objectID = MCRObjectID.getInstance(idString);
    this.validateJobUserRights(objectID);
    MCRObject object = MCRMetadataManager.retrieveMCRObject(objectID);
    Document newDataciteMetadata = transformToDatacite(doi, object);
    MCRDataciteClient dataciteClient = getDataciteClient();
    try {
        URI uri = dataciteClient.resolveDOI(doi);
        URI registeredURI = getRegisteredURI(object);
        if (!uri.equals(registeredURI)) {
            LOGGER.info("Sending new URL({}) to Datacite!", registeredURI);
            dataciteClient.mintDOI(doi, registeredURI);
        }
    } catch (URISyntaxException e) {
        throw new MCRPersistentIdentifierException("Error while updating URL!", e);
    }
    Document oldDataciteMetadata = dataciteClient.resolveMetadata(doi);
    if (!MCRXMLHelper.deepEqual(newDataciteMetadata, oldDataciteMetadata)) {
        LOGGER.info("Sending new Metadata of {} to Datacite!", idString);
        dataciteClient.deleteMetadata(doi);
        dataciteClient.storeMetadata(newDataciteMetadata);
    }
}

Example 55 with MCRObject

use of org.mycore.datamodel.metadata.MCRObject in project mycore by MyCoRe-Org.

the class MCRRSSFeedImporter method importPublications.

public void importPublications(String projectID) throws Exception {
    LOGGER.info("Getting new publications from {} RSS feed...", sourceSystemID);
    SyndFeed feed = retrieveFeed();
    List<MCRObject> importedObjects = new ArrayList<>();
    for (SyndEntry entry : feed.getEntries()) {
        MCRObject importedObject = handleFeedEntry(entry, projectID);
        if (importedObject != null) {
            importedObjects.add(importedObject);
        }
    }
    int numPublicationsImported = importedObjects.size();
    LOGGER.info("imported {} publications.", numPublicationsImported);
    if ((numPublicationsImported > 0) && (xsl2BuildNotificationMail != null)) {
        sendNotificationMail(importedObjects);
    }
}