Examples with SailRepository org.openrdf.repository.sail.SailRepository used on opensource projects

Example 56 with SailRepository

use of org.openrdf.repository.sail.SailRepository in project incubator-rya by apache.

the class MongoIndexerDeleteIT method deleteTest.

@Test
public void deleteTest() throws Exception {
    final Sail sail = GeoRyaSailFactory.getInstance(conf);
    final SailRepositoryConnection conn = new SailRepository(sail).getConnection();
    try {
        populateRya(conn);
        final MongoClient client = conf.getMongoClient();
        // The extra 1 is from the person type defined in freetext
        assertEquals(8, client.getDatabase(conf.getMongoDBName()).getCollection(conf.getTriplesCollectionName()).count());
        assertEquals(4, client.getDatabase(conf.getMongoDBName()).getCollection("ryatest_geo").count());
        assertEquals(1, client.getDatabase(conf.getMongoDBName()).getCollection("ryatest_temporal").count());
        assertEquals(2, client.getDatabase(conf.getMongoDBName()).getCollection("ryatest_freetext").count());
        // free text -- remove one from many
        String delete = // 
        "DELETE DATA \n" + "{\n" + "  <urn:people> <http://www.w3.org/2000/01/rdf-schema#label> \"Alice Palace Hose\" " + "}";
        Update update = conn.prepareUpdate(QueryLanguage.SPARQL, delete);
        update.execute();
        // temporal -- remove one from one
        delete = // 
        "DELETE DATA \n" + "{\n" + "  <foo:time> <Property:atTime> \"0001-02-03T04:05:06Z\" " + "}";
        update = conn.prepareUpdate(QueryLanguage.SPARQL, delete);
        update.execute();
        // geo -- remove many from many
        delete = "PREFIX geo: <http://www.opengis.net/ont/geosparql#>\n" + "PREFIX geof: <http://www.opengis.net/def/function/geosparql/>\n" + // 
        "DELETE \n" + "{\n" + "  <urn:geo> geo:asWKT ?point \n" + "}" + "WHERE { \n" + "  <urn:geo> geo:asWKT ?point .\n" + "  FILTER(geof:sfWithin(?point, \"POLYGON((0 0, 2 0, 2 1, 0 1, 0 0))\"^^geo:wktLiteral))" + "}";
        update = conn.prepareUpdate(QueryLanguage.SPARQL, delete);
        update.execute();
        assertEquals(2, client.getDatabase(conf.getMongoDBName()).getCollection("ryatest_geo").count());
        assertEquals(0, client.getDatabase(conf.getMongoDBName()).getCollection("ryatest_temporal").count());
        assertEquals(1, client.getDatabase(conf.getMongoDBName()).getCollection("ryatest_freetext").count());
        assertEquals(4, client.getDatabase(conf.getMongoDBName()).getCollection(conf.getTriplesCollectionName()).count());
    } finally {
        conn.close();
        sail.shutDown();
    }
}

Example 57 with SailRepository

use of org.openrdf.repository.sail.SailRepository in project incubator-rya by apache.

the class InferenceEngineTest method setUp.

@Override
public void setUp() throws Exception {
    super.setUp();
    dao = new AccumuloRyaDAO();
    connector = new MockInstance().getConnector("", new PasswordToken(""));
    dao.setConnector(connector);
    conf = new AccumuloRdfConfiguration();
    dao.setConf(conf);
    dao.init();
    store = new RdfCloudTripleStore();
    store.setConf(conf);
    store.setRyaDAO(dao);
    inferenceEngine = new InferenceEngine();
    inferenceEngine.setRyaDAO(dao);
    store.setInferenceEngine(inferenceEngine);
    inferenceEngine.refreshGraph();
    store.initialize();
    repository = new SailRepository(store);
    conn = repository.getConnection();
}

Example 58 with SailRepository

use of org.openrdf.repository.sail.SailRepository in project incubator-rya by apache.

the class PropertyChainTest method testGraphConfiguration.

@Test
public void testGraphConfiguration() throws Exception {
    // build a connection
    RdfCloudTripleStore store = new RdfCloudTripleStore();
    store.setConf(conf);
    store.setRyaDAO(ryaDAO);
    InferenceEngine inferenceEngine = new InferenceEngine();
    inferenceEngine.setRyaDAO(ryaDAO);
    store.setInferenceEngine(inferenceEngine);
    inferenceEngine.refreshGraph();
    store.initialize();
    SailRepository repository = new SailRepository(store);
    SailRepositoryConnection conn = repository.getConnection();
    String query = // 
    "INSERT DATA\n" + // 
    "{ GRAPH <http://updated/test> {\n" + "  <urn:greatMother> owl:propertyChainAxiom <urn:12342>  . " + " <urn:12342> <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:node1atjakcvbx15023 . " + " _:node1atjakcvbx15023 <http://www.w3.org/2002/07/owl#inverseOf> <urn:isChildOf> . " + " <urn:12342> <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:node1atjakcvbx15123 . " + " _:node1atjakcvbx15123 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> . " + " _:node1atjakcvbx15123 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <urn:MotherOf> .  }}";
    Update update = conn.prepareUpdate(QueryLanguage.SPARQL, query);
    update.execute();
    inferenceEngine.refreshGraph();
    List<URI> chain = inferenceEngine.getPropertyChain(vf.createURI("urn:greatMother"));
    Assert.assertEquals(chain.size(), 2);
    Assert.assertEquals(chain.get(0), new InverseURI(vf.createURI("urn:isChildOf")));
    Assert.assertEquals(chain.get(1), vf.createURI("urn:MotherOf"));
}

Example 59 with SailRepository

use of org.openrdf.repository.sail.SailRepository in project incubator-rya by apache.

the class PcjIntegrationTestingUtil method getAccumuloNonPcjRepo.

public static SailRepository getAccumuloNonPcjRepo(final String tablePrefix, final String instance) throws AccumuloException, AccumuloSecurityException, RyaDAOException, RepositoryException, InferenceEngineException, NumberFormatException, UnknownHostException, SailException {
    final AccumuloRdfConfiguration nonPcjConf = new AccumuloRdfConfiguration();
    populateAccumuloConfig(instance, tablePrefix, nonPcjConf);
    final Sail nonPcjSail = RyaSailFactory.getInstance(nonPcjConf);
    final SailRepository nonPcjRepo = new SailRepository(nonPcjSail);
    return nonPcjRepo;
}

Example 60 with SailRepository

use of org.openrdf.repository.sail.SailRepository in project incubator-rya by apache.

the class MongoPCJIndexIT method sparqlQuery_Test_complex.

@Test
public void sparqlQuery_Test_complex() throws Exception {
    // Setup a Rya Client.
    final MongoConnectionDetails connectionDetails = getConnectionDetails();
    final RyaClient ryaClient = MongoRyaClientFactory.build(connectionDetails, getMongoClient());
    final String pcjQuery = "SELECT ?name WHERE {" + " ?name <urn:likes> <urn:icecream> ." + " ?name <urn:hasEyeColor> <urn:blue> ." + " }";
    final String testQuery = "SELECT ?name WHERE {" + " ?name <urn:hasHairColor> <urn:brown> ." + " ?name <urn:likes> <urn:icecream> ." + " ?name <urn:hasEyeColor> <urn:blue> ." + " }";
    // Install an instance of Rya and load statements.
    conf.setBoolean(ConfigUtils.USE_PCJ, true);
    conf.setBoolean(ConfigUtils.USE_OPTIMAL_PCJ, true);
    conf.setBoolean(ConfigUtils.DISPLAY_QUERY_PLAN, true);
    ryaClient.getInstall().install(conf.getRyaInstanceName(), InstallConfiguration.builder().setEnablePcjIndex(true).build());
    ryaClient.getLoadStatements().loadStatements(conf.getRyaInstanceName(), getStatements());
    final String pcjId = ryaClient.getCreatePCJ().createPCJ(conf.getRyaInstanceName(), pcjQuery);
    ryaClient.getBatchUpdatePCJ().batchUpdate(conf.getRyaInstanceName(), pcjId);
    System.out.println("Triples: " + getMongoClient().getDatabase(conf.getRyaInstanceName()).getCollection(conf.getTriplesCollectionName()).count());
    System.out.println("PCJS: " + getMongoClient().getDatabase(conf.getRyaInstanceName()).getCollection("pcjs").count());
    // run the query.  since the triples collection is gone, if the results match, they came from the PCJ index.
    final Sail sail = RyaSailFactory.getInstance(conf);
    SailRepositoryConnection conn = new SailRepository(sail).getConnection();
    conn.begin();
    final TupleQuery tupleQuery = conn.prepareTupleQuery(QueryLanguage.SPARQL, testQuery);
    tupleQuery.setBinding(RdfCloudTripleStoreConfiguration.CONF_QUERYPLAN_FLAG, RdfCloudTripleStoreConstants.VALUE_FACTORY.createLiteral(true));
    final TupleQueryResult rez = tupleQuery.evaluate();
    final Set<BindingSet> results = new HashSet<>();
    while (rez.hasNext()) {
        final BindingSet bs = rez.next();
        results.add(bs);
    }
    // Verify the correct results were loaded into the PCJ table.
    final Set<BindingSet> expectedResults = new HashSet<>();
    MapBindingSet bs = new MapBindingSet();
    bs = new MapBindingSet();
    bs.addBinding("name", VF.createURI("urn:David"));
    expectedResults.add(bs);
    bs = new MapBindingSet();
    bs.addBinding("name", VF.createURI("urn:Eve"));
    expectedResults.add(bs);
    bs = new MapBindingSet();
    bs.addBinding("name", VF.createURI("urn:Frank"));
    expectedResults.add(bs);
    assertEquals(3, results.size());
    assertEquals(expectedResults, results);
}