Examples with ContributorOrcid org.orcid.jaxb.model.common_v2.ContributorOrcid used on opensource projects

Example 6 with ContributorOrcid

use of org.orcid.jaxb.model.common_v2.ContributorOrcid in project ORCID-Source by ORCID.

the class ActivityValidatorTest method getFunding.

public Funding getFunding() {
    Funding funding = new Funding();
    Amount amount = new Amount();
    amount.setContent("1000");
    amount.setCurrencyCode("$");
    funding.setAmount(amount);
    FundingContributor contributor = new FundingContributor();
    FundingContributorAttributes attributes = new FundingContributorAttributes();
    attributes.setContributorRole(FundingContributorRole.LEAD);
    ContributorOrcid contributorOrcid = new ContributorOrcid();
    contributorOrcid.setHost("http://test.orcid.org");
    contributorOrcid.setPath("0000-0000-0000-0000");
    contributorOrcid.setUri("http://test.orcid.org/0000-0000-0000-0000");
    contributor.setContributorAttributes(attributes);
    contributor.setContributorOrcid(contributorOrcid);
    FundingContributors contributors = new FundingContributors();
    contributors.getContributor().add(contributor);
    funding.setContributors(contributors);
    funding.setDescription("description");
    funding.setEndDate(getFuzzyDate());
    funding.setExternalIdentifiers(getExternalIDs());
    funding.setOrganization(getOrganization());
    funding.setOrganizationDefinedType(new OrganizationDefinedFundingSubType("subtype"));
    funding.setStartDate(getFuzzyDate());
    FundingTitle title = new FundingTitle();
    title.setTitle(new Title("title"));
    title.setTranslatedTitle(new TranslatedTitle("translated title", "en"));
    funding.setTitle(title);
    funding.setType(FundingType.AWARD);
    funding.setUrl(new Url("http://test.orcid.org"));
    funding.setVisibility(Visibility.PUBLIC);
    return funding;
}

Example 7 with ContributorOrcid

use of org.orcid.jaxb.model.common_v2.ContributorOrcid in project ORCID-Source by ORCID.

the class ActivityValidator method validateWork.

public void validateWork(Work work, SourceEntity sourceEntity, boolean createFlag, boolean isApiRequest, Visibility originalVisibility) {
    WorkTitle title = work.getWorkTitle();
    if (title == null || title.getTitle() == null || StringUtils.isEmpty(title.getTitle().getContent())) {
        throw new ActivityTitleValidationException();
    }
    if (work.getCountry() != null) {
        if (work.getCountry().getValue() == null) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(Iso3166Country.values()).map(element -> element.value()).collect(Collectors.joining(", "));
            params.put("type", "country");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
    }
    //translated title language code
    if (title != null && title.getTranslatedTitle() != null) {
        String translatedTitle = title.getTranslatedTitle().getContent();
        String languageCode = title.getTranslatedTitle().getLanguageCode();
        if (PojoUtil.isEmpty(translatedTitle) && !PojoUtil.isEmpty(languageCode)) {
            throw new OrcidValidationException("Please specify a translated title or remove the language code");
        }
        //If translated title language code is null or invalid
        if (!PojoUtil.isEmpty(translatedTitle) && (PojoUtil.isEmpty(title.getTranslatedTitle().getLanguageCode()) || !Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).anyMatch(title.getTranslatedTitle().getLanguageCode()::equals))) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).collect(Collectors.joining(", "));
            params.put("type", "translated title -> language code");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
    }
    if (work.getWorkType() == null) {
        Map<String, String> params = new HashMap<String, String>();
        String values = Arrays.stream(WorkType.values()).map(element -> element.value()).collect(Collectors.joining(", "));
        params.put("type", "work type");
        params.put("values", values);
        throw new ActivityTypeValidationException(params);
    }
    if (!PojoUtil.isEmpty(work.getLanguageCode())) {
        if (!Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).anyMatch(work.getLanguageCode()::equals)) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).collect(Collectors.joining(", "));
            params.put("type", "language code");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
    }
    //publication date
    if (work.getPublicationDate() != null) {
        PublicationDate pd = work.getPublicationDate();
        Year year = pd.getYear();
        Month month = pd.getMonth();
        Day day = pd.getDay();
        if (year != null) {
            try {
                Integer.valueOf(year.getValue());
            } catch (NumberFormatException n) {
                Map<String, String> params = new HashMap<String, String>();
                params.put("type", "publication date -> year");
                params.put("values", "integers");
                throw new ActivityTypeValidationException(params);
            }
            if (year.getValue().length() != 4) {
                throw new OrcidValidationException("Invalid year " + year.getValue() + " please specify a four digits value");
            }
        }
        if (month != null) {
            try {
                Integer.valueOf(month.getValue());
            } catch (NumberFormatException n) {
                Map<String, String> params = new HashMap<String, String>();
                params.put("type", "publication date -> month");
                params.put("values", "integers");
                throw new ActivityTypeValidationException(params);
            }
            if (month.getValue().length() != 2) {
                throw new OrcidValidationException("Invalid month " + month.getValue() + " please specify a two digits value");
            }
        }
        if (day != null) {
            try {
                Integer.valueOf(day.getValue());
            } catch (NumberFormatException n) {
                Map<String, String> params = new HashMap<String, String>();
                params.put("type", "publication date -> day");
                params.put("values", "integers");
                throw new ActivityTypeValidationException(params);
            }
            if (day.getValue().length() != 2) {
                throw new OrcidValidationException("Invalid day " + day.getValue() + " please specify a two digits value");
            }
        }
        //Check the date is valid
        boolean isYearEmpty = (year == null || year.getValue() == null) ? true : false;
        boolean isMonthEmpty = (month == null || month.getValue() == null) ? true : false;
        boolean isDayEmpty = (day == null || day.getValue() == null) ? true : false;
        if (isYearEmpty && (!isMonthEmpty || !isDayEmpty)) {
            throw new OrcidValidationException("Invalid date, please specify a year element");
        } else if (!isYearEmpty && isMonthEmpty && !isDayEmpty) {
            throw new OrcidValidationException("Invalid date, please specify a month element");
        } else if (isYearEmpty && isMonthEmpty && !isDayEmpty) {
            throw new OrcidValidationException("Invalid date, please specify a year and month elements");
        }
    }
    //citation
    if (work.getWorkCitation() != null) {
        String citation = work.getWorkCitation().getCitation();
        CitationType type = work.getWorkCitation().getWorkCitationType();
        if (type == null) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(CitationType.values()).map(element -> element.value()).collect(Collectors.joining(", "));
            params.put("type", "citation type");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
        if (PojoUtil.isEmpty(citation)) {
            throw new OrcidValidationException("Please specify a citation or remove the parent tag");
        }
    }
    if (work.getWorkExternalIdentifiers() == null || work.getWorkExternalIdentifiers().getExternalIdentifier() == null || work.getExternalIdentifiers().getExternalIdentifier().isEmpty()) {
        throw new ActivityIdentifierValidationException();
    }
    if (work.getWorkContributors() != null) {
        WorkContributors contributors = work.getWorkContributors();
        if (!contributors.getContributor().isEmpty()) {
            for (Contributor contributor : contributors.getContributor()) {
                if (contributor.getContributorOrcid() != null) {
                    ContributorOrcid contributorOrcid = contributor.getContributorOrcid();
                    if (!PojoUtil.isEmpty(contributorOrcid.getUri())) {
                        if (!OrcidStringUtils.isValidOrcidUri(contributorOrcid.getUri())) {
                            throw new OrcidValidationException("Invalid contributor URI");
                        }
                    }
                    if (!PojoUtil.isEmpty(contributorOrcid.getPath())) {
                        if (!OrcidStringUtils.isValidOrcid(contributorOrcid.getPath())) {
                            throw new OrcidValidationException("Invalid contributor ORCID");
                        }
                    }
                }
                if (contributor.getCreditName() != null) {
                    if (PojoUtil.isEmpty(contributor.getCreditName().getContent())) {
                        throw new OrcidValidationException("Please specify a contributor credit name or remove the empty tag");
                    }
                }
                if (contributor.getContributorEmail() != null) {
                    if (PojoUtil.isEmpty(contributor.getContributorEmail().getValue())) {
                        throw new OrcidValidationException("Please specify a contributor email or remove the empty tag");
                    }
                }
            }
        }
    }
    if (work.getPutCode() != null && createFlag) {
        Map<String, String> params = new HashMap<String, String>();
        if (sourceEntity != null) {
            params.put("clientName", sourceEntity.getSourceName());
        }
        throw new InvalidPutCodeException(params);
    }
    // Check that we are not changing the visibility
    if (isApiRequest && !createFlag) {
        Visibility updatedVisibility = work.getVisibility();
        validateVisibilityDoesntChange(updatedVisibility, originalVisibility);
    }
    externalIDValidator.validateWorkOrPeerReview(work.getExternalIdentifiers());
}

Example 8 with ContributorOrcid

use of org.orcid.jaxb.model.common_v2.ContributorOrcid in project ORCID-Source by ORCID.

the class Contributor method toFundingContributor.

public FundingContributor toFundingContributor() {
    FundingContributor c = new FundingContributor();
    if (this.getContributorRole() != null || this.getContributorSequence() != null) {
        FundingContributorAttributes ca = new FundingContributorAttributes();
        if (!PojoUtil.isEmpty(this.getContributorRole()))
            ca.setContributorRole(FundingContributorRole.fromValue(this.getContributorRole().getValue()));
        c.setContributorAttributes(ca);
    }
    if (this.getEmail() != null)
        c.setContributorEmail(new ContributorEmail(this.getEmail().getValue()));
    if (this.getOrcid() != null) {
        ContributorOrcid contributorOrcid = new ContributorOrcid(this.getOrcid().getValue());
        if (this.getUri() != null) {
            String uriString = this.getUri().getValue();
            if (StringUtils.isNotBlank(uriString)) {
                try {
                    URI uri = new URI(uriString);
                    contributorOrcid.setHost(uri.getHost());
                } catch (URISyntaxException e) {
                    throw new RuntimeException("Problem parsing contributor orcid uri", e);
                }
            }
        }
        contributorOrcid.setUri(this.getUri().getValue());
        c.setContributorOrcid(contributorOrcid);
    }
    if (this.getCreditName() != null) {
        CreditName cn = new CreditName(this.getCreditName().getValue());
        c.setCreditName(cn);
    }
    return c;
}

Example 9 with ContributorOrcid

use of org.orcid.jaxb.model.common_v2.ContributorOrcid in project ORCID-Source by ORCID.

the class ContributorUtilsTest method getFundingContributorWithOrcid.

private FundingContributors getFundingContributorWithOrcid() {
    ContributorOrcid contributorOrcid = new ContributorOrcid();
    contributorOrcid.setPath("0000-0003-4902-6327");
    contributorOrcid.setHost("orcid.org");
    contributorOrcid.setUri("http://orcid.org/0000-0003-4902-6327");
    FundingContributor contributor = new FundingContributor();
    contributor.setContributorOrcid(contributorOrcid);
    contributor.setContributorEmail(new ContributorEmail("never@show.this"));
    contributor.setCreditName(new CreditName("original credit name"));
    FundingContributors fundingContributors = new FundingContributors();
    fundingContributors.getContributor().add(contributor);
    return fundingContributors;
}

Example 10 with ContributorOrcid

use of org.orcid.jaxb.model.common_v2.ContributorOrcid in project ORCID-Source by ORCID.

the class ContributorUtils method filterContributorPrivateData.

public void filterContributorPrivateData(Work work) {
    if (work.getWorkContributors() != null && work.getWorkContributors().getContributor() != null) {
        for (Contributor contributor : work.getWorkContributors().getContributor()) {
            contributor.setContributorEmail(null);
            if (!PojoUtil.isEmpty(contributor.getContributorOrcid())) {
                String contributorOrcid = contributor.getContributorOrcid().getPath();
                if (profileEntityManager.orcidExists(contributorOrcid)) {
                    // contributor is an ORCID user - visibility of user's
                    // name in record must be taken into account
                    ProfileEntity profileEntity = profileEntityCacheManager.retrieve(contributorOrcid);
                    String publicContributorCreditName = cacheManager.getPublicCreditName(profileEntity);
                    CreditName creditName = new CreditName(publicContributorCreditName != null ? publicContributorCreditName : "");
                    contributor.setCreditName(creditName);
                }
            }
        }
    }
}