Examples with Identifier org.orcid.jaxb.model.record.summary_rc1.Identifier used on opensource projects

Example 46 with Identifier

use of org.orcid.jaxb.model.record.summary_rc1.Identifier in project cxf by apache.

the class RMTxStore method getDestinationSequences.

public Collection<DestinationSequence> getDestinationSequences(String endpointIdentifier) {
    if (LOG.isLoggable(Level.FINE)) {
        LOG.info("Getting destination sequences for endpoint: " + endpointIdentifier);
    }
    Connection con = verifyConnection();
    PreparedStatement stmt = null;
    SQLException conex = null;
    Collection<DestinationSequence> seqs = new ArrayList<>();
    ResultSet res = null;
    try {
        stmt = getStatement(con, SELECT_DEST_SEQUENCES_STMT_STR);
        stmt.setString(1, endpointIdentifier);
        res = stmt.executeQuery();
        while (res.next()) {
            Identifier sid = new Identifier();
            sid.setValue(res.getString(1));
            EndpointReferenceType acksTo = RMUtils.createReference(res.getString(2));
            long lm = res.getLong(3);
            ProtocolVariation pv = decodeProtocolVersion(res.getString(4));
            boolean t = res.getBoolean(5);
            InputStream is = res.getBinaryStream(6);
            SequenceAcknowledgement ack = null;
            if (null != is) {
                ack = PersistenceUtils.getInstance().deserialiseAcknowledgment(is);
            }
            DestinationSequence seq = new DestinationSequence(sid, acksTo, lm, t, ack, pv);
            seqs.add(seq);
        }
    } catch (SQLException ex) {
        conex = ex;
        LOG.log(Level.WARNING, new Message("SELECT_DEST_SEQ_FAILED_MSG", LOG).toString(), ex);
    } finally {
        releaseResources(stmt, res);
        updateConnectionState(con, conex);
    }
    return seqs;
}

Example 47 with Identifier

use of org.orcid.jaxb.model.record.summary_rc1.Identifier in project cxf by apache.

the class RMTxStore method getSourceSequences.

public Collection<SourceSequence> getSourceSequences(String endpointIdentifier) {
    if (LOG.isLoggable(Level.FINE)) {
        LOG.info("Getting source sequences for endpoint: " + endpointIdentifier);
    }
    Connection con = verifyConnection();
    PreparedStatement stmt = null;
    SQLException conex = null;
    Collection<SourceSequence> seqs = new ArrayList<>();
    ResultSet res = null;
    try {
        stmt = getStatement(con, SELECT_SRC_SEQUENCES_STMT_STR);
        stmt.setString(1, endpointIdentifier);
        res = stmt.executeQuery();
        while (res.next()) {
            Identifier sid = new Identifier();
            sid.setValue(res.getString(1));
            long cmn = res.getLong(2);
            boolean lm = res.getBoolean(3);
            long lval = res.getLong(4);
            Date expiry = 0 == lval ? null : new Date(lval);
            String oidValue = res.getString(5);
            Identifier oi = null;
            if (null != oidValue) {
                oi = new Identifier();
                oi.setValue(oidValue);
            }
            ProtocolVariation pv = decodeProtocolVersion(res.getString(6));
            SourceSequence seq = new SourceSequence(sid, expiry, oi, cmn, lm, pv);
            seqs.add(seq);
        }
    } catch (SQLException ex) {
        conex = ex;
        // ignore
        LOG.log(Level.WARNING, new Message("SELECT_SRC_SEQ_FAILED_MSG", LOG).toString(), ex);
    } finally {
        releaseResources(stmt, res);
        updateConnectionState(con, conex);
    }
    return seqs;
}

Example 48 with Identifier

use of org.orcid.jaxb.model.record.summary_rc1.Identifier in project cxf by apache.

the class RMOutInterceptor method handle.

protected void handle(Message msg) throws SequenceFault, RMException {
    AddressingProperties maps = ContextUtils.retrieveMAPs(msg, false, true, false);
    if (null == maps) {
        LogUtils.log(LOG, Level.WARNING, "MAPS_RETRIEVAL_FAILURE_MSG");
        return;
    }
    if (Boolean.TRUE.equals(msg.get(RMMessageConstants.RM_RETRANSMISSION))) {
        return;
    }
    if (isRuntimeFault(msg)) {
        return;
    }
    RMConfiguration config = getManager().getEffectiveConfiguration(msg);
    String wsaNamespace = config.getAddressingNamespace();
    String rmNamespace = config.getRMNamespace();
    ProtocolVariation protocol = ProtocolVariation.findVariant(rmNamespace, wsaNamespace);
    RMContextUtils.setProtocolVariation(msg, protocol);
    Destination destination = getManager().getDestination(msg);
    String action = null;
    if (null != maps.getAction()) {
        action = maps.getAction().getValue();
    }
    // make sure we use the appropriate namespace
    maps.exposeAs(wsaNamespace);
    if (LOG.isLoggable(Level.FINE)) {
        LOG.fine("Action: " + action);
    }
    boolean isApplicationMessage = !RMContextUtils.isRMProtocolMessage(action);
    boolean isPartialResponse = MessageUtils.isPartialResponse(msg);
    RMConstants constants = protocol.getConstants();
    RMProperties rmpsOut = RMContextUtils.retrieveRMProperties(msg, true);
    if (isApplicationMessage && !isPartialResponse) {
        addRetransmissionInterceptor(msg);
    }
    Identifier inSeqId = null;
    if (isApplicationMessage) {
        RMProperties rmpsIn = RMContextUtils.retrieveRMProperties(msg, false);
        if (null != rmpsIn && null != rmpsIn.getSequence()) {
            inSeqId = rmpsIn.getSequence().getIdentifier();
            SourceSequence seq = rmpsIn.getSourceSequence();
            SequenceType sequence = rmpsIn.getSequence();
            if (seq == null || sequence == null) {
                LOG.warning("sequence not set for outbound message, skipped acknowledgement request");
            } else {
                addAckRequest(msg, rmpsIn, seq, sequence);
            }
        }
    }
    // add Acknowledgements (to application messages or explicitly created Acknowledgement messages only)
    boolean isAck = constants.getSequenceAckAction().equals(action);
    boolean isClose = constants.getCloseSequenceAction().equals(action);
    boolean isTerminate = constants.getTerminateSequenceAction().equals(action);
    if (isApplicationMessage || isAck || isClose || isTerminate) {
        AttributedURIType to = maps.getTo();
        assert null != to;
        addAcknowledgements(destination, rmpsOut, inSeqId, to);
        if (isPartialResponse && rmpsOut.getAcks() != null && rmpsOut.getAcks().size() > 0) {
            setAction(maps, constants.getSequenceAckAction());
            msg.remove(Message.EMPTY_PARTIAL_RESPONSE_MESSAGE);
            isAck = true;
        }
    }
    if (isAck || (isTerminate && RM10Constants.NAMESPACE_URI.equals(rmNamespace))) {
        maps.setReplyTo(RMUtils.createNoneReference());
    }
    assertReliability(msg);
}

Example 49 with Identifier

use of org.orcid.jaxb.model.record.summary_rc1.Identifier in project cxf by apache.

the class RMTxStore method createSourceSequence.

public void createSourceSequence(SourceSequence seq) {
    String sequenceIdentifier = seq.getIdentifier().getValue();
    String endpointIdentifier = seq.getEndpointIdentifier();
    String protocolVersion = encodeProtocolVersion(seq.getProtocol());
    if (LOG.isLoggable(Level.FINE)) {
        LOG.fine("Creating source sequence: " + sequenceIdentifier + ", (endpoint: " + endpointIdentifier + ")");
    }
    Connection con = verifyConnection();
    PreparedStatement stmt = null;
    SQLException conex = null;
    try {
        beginTransaction();
        stmt = getStatement(con, CREATE_SRC_SEQUENCE_STMT_STR);
        stmt.setString(1, sequenceIdentifier);
        Date expiry = seq.getExpires();
        stmt.setLong(2, expiry == null ? 0 : expiry.getTime());
        Identifier osid = seq.getOfferingSequenceIdentifier();
        stmt.setString(3, osid == null ? null : osid.getValue());
        stmt.setString(4, endpointIdentifier);
        stmt.setString(5, protocolVersion);
        stmt.execute();
        commit(con);
    } catch (SQLException ex) {
        conex = ex;
        abort(con);
        throw new RMStoreException(ex);
    } finally {
        releaseResources(stmt, null);
        updateConnectionState(con, conex);
    }
}

Example 50 with Identifier

use of org.orcid.jaxb.model.record.summary_rc1.Identifier in project cxf by apache.

the class EncoderDecoder10AImpl method buildHeaderFaultObject.

@Override
protected Object buildHeaderFaultObject(SequenceFault sf) {
    org.apache.cxf.ws.rm.v200502wsa15.SequenceFaultType flt = new org.apache.cxf.ws.rm.v200502wsa15.SequenceFaultType();
    flt.setFaultCode(sf.getFaultCode());
    Object detail = sf.getDetail();
    if (detail instanceof Element) {
        flt.getAny().add(detail);
    } else if (detail instanceof Identifier) {
        flt.getAny().add(VersionTransformer.convert200502wsa15((Identifier) detail));
    } else if (detail instanceof SequenceAcknowledgement) {
        flt.getAny().add(VersionTransformer.convert200502wsa15((SequenceAcknowledgement) detail));
    }
    Element data = sf.getExtraDetail();
    if (data != null) {
        flt.getAny().add(data);
    }
    return flt;
}