Examples with PeerReviewSummary org.orcid.jaxb.model.record.summary_rc1.PeerReviewSummary used on opensource projects

Example 71 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviewSummary in project ORCID-Source by ORCID.

the class PublicV2ApiServiceDelegatorImpl method viewPeerReviewSummary.

@Override
public Response viewPeerReviewSummary(String orcid, Long putCode) {
    PeerReviewSummary summary = peerReviewManagerReadOnly.getPeerReviewSummary(orcid, putCode);
    publicAPISecurityManagerV2.checkIsPublic(summary);
    ActivityUtils.setPathToActivity(summary, orcid);
    sourceUtilsReadOnly.setSourceName(summary);
    return Response.ok(summary).build();
}

Example 72 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviewSummary in project ORCID-Source by ORCID.

the class PeerReviewManagerTest method testGroupPeerReviews_groupOnlyPublicPeerReviews2.

@Test
public void testGroupPeerReviews_groupOnlyPublicPeerReviews2() {
    PeerReviewSummary s1 = getPeerReviewSummary("public-peer-review-group-id-1", "ext-id-1", Visibility.PUBLIC);
    PeerReviewSummary s2 = getPeerReviewSummary("limited-peer-review-group-id-1", "ext-id-2", Visibility.LIMITED);
    PeerReviewSummary s3 = getPeerReviewSummary("private-peer-review-group-id-1", "ext-id-3", Visibility.PRIVATE);
    PeerReviewSummary s4 = getPeerReviewSummary("public-peer-review-group-id-1", "ext-id-4", Visibility.PUBLIC);
    PeerReviewSummary s5 = getPeerReviewSummary("limited-peer-review-group-id-1", "ext-id-5", Visibility.LIMITED);
    PeerReviewSummary s6 = getPeerReviewSummary("private-peer-review-group-id-1", "ext-id-6", Visibility.PRIVATE);
    PeerReviewSummary s7 = getPeerReviewSummary("public-peer-review-group-id-2", "ext-id-7", Visibility.PUBLIC);
    PeerReviewSummary s8 = getPeerReviewSummary("limited-peer-review-group-id-2", "ext-id-8", Visibility.LIMITED);
    PeerReviewSummary s9 = getPeerReviewSummary("private-peer-review-group-id-2", "ext-id-9", Visibility.PRIVATE);
    List<PeerReviewSummary> peerReviewList = Arrays.asList(s1, s2, s3, s4, s5, s6, s7, s8, s9);
    /**
         * They should be grouped as
         * 
         * Group 1: ext-id-1 + ext-id-4
         * Group 2: ext-id-7
         * */
    PeerReviews peerReviews = peerReviewManager.groupPeerReviews(peerReviewList, true);
    assertNotNull(peerReviews);
    assertEquals(2, peerReviews.getPeerReviewGroup().size());
    assertEquals(1, peerReviews.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("public-peer-review-group-id-1", peerReviews.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(2, peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertThat(peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getValue(), anyOf(is("ext-id-1"), is("ext-id-4")));
    assertThat(peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().get(1).getExternalIdentifiers().getExternalIdentifier().get(0).getValue(), anyOf(is("ext-id-1"), is("ext-id-4")));
    assertEquals(1, peerReviews.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("public-peer-review-group-id-2", peerReviews.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(1, peerReviews.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals("ext-id-7", peerReviews.getPeerReviewGroup().get(1).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getValue());
}

Example 73 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviewSummary in project ORCID-Source by ORCID.

the class PeerReviewManagerTest method testGroupPeerReviews.

@Test
public void testGroupPeerReviews() {
    /**
         * They should be grouped as
         * 
         * Group 1: ext-id-1 + ext-id-4
         * Group 2: ext-id-2 + ext-id-5
         * Group 3: ext-id-3 
         * Group 4: ext-id-6
         * */
    PeerReviewSummary s1 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-1", Visibility.PUBLIC);
    PeerReviewSummary s2 = getPeerReviewSummary("peer-review-group-id-2", "ext-id-2", Visibility.LIMITED);
    PeerReviewSummary s3 = getPeerReviewSummary("peer-review-group-id-3", "ext-id-3", Visibility.PRIVATE);
    PeerReviewSummary s4 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-4", Visibility.PRIVATE);
    PeerReviewSummary s5 = getPeerReviewSummary("peer-review-group-id-2", "ext-id-5", Visibility.PUBLIC);
    PeerReviewSummary s6 = getPeerReviewSummary("peer-review-group-id-4", "ext-id-6", Visibility.PRIVATE);
    List<PeerReviewSummary> peerReviewList1 = Arrays.asList(s1, s2, s3, s4, s5, s6);
    PeerReviews peerReviews1 = peerReviewManager.groupPeerReviews(peerReviewList1, false);
    assertNotNull(peerReviews1);
    assertEquals(4, peerReviews1.getPeerReviewGroup().size());
    //Group 1 have group1
    assertEquals(2, peerReviews1.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-1", peerReviews1.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 2 have group2
    assertEquals(2, peerReviews1.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-2", peerReviews1.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 3 have group3
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-3", peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 4 have group4
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-4", peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().get(0).getValue());
    PeerReviewSummary s7 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-7", Visibility.PRIVATE);
    /**
         * Now, they should be grouped as
         * 
         * Group 1: ext-id-1 + ext-id-4 + ext-id-7
         * Group 2: ext-id-2 + ext-id-5
         * Group 3: ext-id-3 
         * Group 4: ext-id-6
         * */
    List<PeerReviewSummary> peerReviewList2 = Arrays.asList(s1, s2, s3, s4, s5, s6, s7);
    PeerReviews peerReviews2 = peerReviewManager.groupPeerReviews(peerReviewList2, false);
    assertNotNull(peerReviews2);
    assertEquals(4, peerReviews2.getPeerReviewGroup().size());
    //Group 1 have peer-review-group-id-1, so, it will now have 1 more
    assertEquals(3, peerReviews2.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertEquals(1, peerReviews2.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-1", peerReviews2.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 2 have peer-review-group-id-2
    assertEquals(2, peerReviews2.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals(1, peerReviews2.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-2", peerReviews2.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 3 have peer-review-group-id-3
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-3", peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().get(0).getValue());
    //Group 4 have peer-review-group-id-4
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-4", peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().get(0).getValue());
}

Example 74 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviewSummary in project ORCID-Source by ORCID.

the class SourceUtils method setSourceName.

public void setSourceName(ActivitiesSummary as) {
    if (as == null) {
        return;
    }
    if (as.getEducations() != null) {
        Educations educations = as.getEducations();
        List<EducationSummary> list = educations.getSummaries();
        if (list != null) {
            for (EducationSummary summary : list) {
                setSourceName(summary);
            }
        }
    }
    if (as.getEmployments() != null) {
        Employments employments = as.getEmployments();
        List<EmploymentSummary> list = employments.getSummaries();
        if (list != null) {
            for (EmploymentSummary summary : list) {
                setSourceName(summary);
            }
        }
    }
    if (as.getFundings() != null) {
        Fundings fundings = as.getFundings();
        List<FundingGroup> groups = fundings.getFundingGroup();
        if (groups != null) {
            for (FundingGroup group : groups) {
                List<FundingSummary> summaryList = group.getFundingSummary();
                if (summaryList != null) {
                    for (FundingSummary summary : summaryList) {
                        setSourceName(summary);
                    }
                }
            }
        }
    }
    if (as.getPeerReviews() != null) {
        PeerReviews peerReviews = as.getPeerReviews();
        List<PeerReviewGroup> groups = peerReviews.getPeerReviewGroup();
        if (groups != null) {
            for (PeerReviewGroup group : groups) {
                List<PeerReviewSummary> summaryList = group.getPeerReviewSummary();
                if (summaryList != null) {
                    for (PeerReviewSummary summary : summaryList) {
                        setSourceName(summary);
                    }
                }
            }
        }
    }
    if (as.getWorks() != null) {
        Works works = as.getWorks();
        List<WorkGroup> groups = works.getWorkGroup();
        if (groups != null) {
            for (WorkGroup group : groups) {
                List<WorkSummary> summaryList = group.getWorkSummary();
                if (summaryList != null) {
                    for (WorkSummary summary : summaryList) {
                        setSourceName(summary);
                    }
                }
            }
        }
    }
}

Example 75 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc1.PeerReviewSummary in project ORCID-Source by ORCID.

the class ActivitiesGroup method belongsToGroup.

@Deprecated
public /** This method is only used by tests to confirm accuracy of ActivitiesGroupGenerator and should not be used in production
     * 
     * @param activity
     * @return
     */
boolean belongsToGroup(GroupableActivity activity) {
    boolean isPeerReview = PeerReviewSummary.class.isAssignableFrom(activity.getClass());
    //If there are no grouping keys
    if (groupKeys == null || groupKeys.isEmpty()) {
        if (isPeerReview) {
            return false;
        } else {
            if (activity.getExternalIdentifiers() == null || activity.getExternalIdentifiers().getExternalIdentifier() == null || activity.getExternalIdentifiers().getExternalIdentifier().isEmpty()) {
                //If the activity doesn't have any external identifier, check if the activity is in the group
                if (activities.contains(activity))
                    return true;
                else
                    return false;
            } else {
                //If any of the activities pass the grouping validation, the activity must belong to other group
                for (GroupAble extId : activity.getExternalIdentifiers().getExternalIdentifier()) {
                    if (extId.isGroupAble())
                        return false;
                }
                //If none of the activities pass the groupings validation, so, lets check if the group actually contains the activity
                if (activities.contains(activity))
                    return true;
                else
                    return false;
            }
        }
    }
    if (isPeerReview) {
        PeerReviewSummary peerReviewSummary = (PeerReviewSummary) activity;
        PeerReviewGroupKey prgk = new PeerReviewGroupKey();
        prgk.setGroupId(peerReviewSummary.getGroupId());
        if (prgk.isGroupAble()) {
            if (groupKeys.contains(prgk)) {
                return true;
            }
        }
    } else {
        //Check existing keys
        ExternalIdentifiersContainer container = activity.getExternalIdentifiers();
        if (container != null) {
            List<? extends GroupAble> extIds = (List<? extends GroupAble>) container.getExternalIdentifier();
            for (GroupAble extId : extIds) {
                //First check keys restrictions
                if (extId.isGroupAble()) {
                    //If any of the keys already exists on this group, return true
                    if (containsKey(extId))
                        return true;
                }
            }
        }
    }
    return false;
}