Examples with PeerReviewSummary org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary used on opensource projects

Example 66 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class OrcidSecurityManager_ActivitiesSummaryTest method testActivitiesSummary_When_SomeLimited_ReadPublicToken.

@Test
public void testActivitiesSummary_When_SomeLimited_ReadPublicToken() {
    SecurityContextTestUtils.setUpSecurityContext(ORCID_1, CLIENT_1, ScopePathType.READ_PUBLIC);
    EducationSummary e1 = createEducationSummary(Visibility.LIMITED, CLIENT_2);
    EducationSummary e2 = createEducationSummary(Visibility.PUBLIC, CLIENT_2);
    EducationSummary e3 = createEducationSummary(Visibility.LIMITED, CLIENT_2);
    EmploymentSummary em1 = createEmploymentSummary(Visibility.LIMITED, CLIENT_2);
    EmploymentSummary em2 = createEmploymentSummary(Visibility.PUBLIC, CLIENT_2);
    EmploymentSummary em3 = createEmploymentSummary(Visibility.LIMITED, CLIENT_2);
    FundingSummary f1 = createFundingSummary(Visibility.LIMITED, CLIENT_2, EXTID_1);
    FundingSummary f2 = createFundingSummary(Visibility.PUBLIC, CLIENT_2, EXTID_2);
    FundingSummary f3 = createFundingSummary(Visibility.LIMITED, CLIENT_2, EXTID_3);
    PeerReviewSummary p1 = createPeerReviewSummary(Visibility.LIMITED, CLIENT_2, EXTID_1);
    PeerReviewSummary p2 = createPeerReviewSummary(Visibility.PUBLIC, CLIENT_2, EXTID_2);
    PeerReviewSummary p3 = createPeerReviewSummary(Visibility.LIMITED, CLIENT_2, EXTID_3);
    WorkSummary w1 = createWorkSummary(Visibility.LIMITED, CLIENT_2, EXTID_1);
    WorkSummary w2 = createWorkSummary(Visibility.PUBLIC, CLIENT_2, EXTID_2);
    WorkSummary w3 = createWorkSummary(Visibility.LIMITED, CLIENT_2, EXTID_3);
    ActivitiesSummary as = new ActivitiesSummary();
    as.setEducations(createEducations(e1, e2, e3));
    as.setEmployments(createEmployments(em1, em2, em3));
    as.setFundings(createFundings(f1, f2, f3));
    as.setPeerReviews(createPeerReviews(p1, p2, p3));
    as.setWorks(createWorks(w1, w2, w3));
    orcidSecurityManager.checkAndFilter(ORCID_1, as);
    assertNotNull(as);
    // Check educations
    assertEquals(1, as.getEducations().getSummaries().size());
    assertFalse(as.getEducations().getSummaries().contains(e1));
    assertTrue(as.getEducations().getSummaries().contains(e2));
    assertFalse(as.getEducations().getSummaries().contains(e3));
    // Check employments
    assertEquals(1, as.getEmployments().getSummaries().size());
    assertFalse(as.getEmployments().getSummaries().contains(em1));
    assertTrue(as.getEmployments().getSummaries().contains(em2));
    assertFalse(as.getEmployments().getSummaries().contains(em3));
    // Check fundings
    assertEquals(1, as.getFundings().getFundingGroup().size());
    assertEquals(1, as.getFundings().getFundingGroup().get(0).getActivities().size());
    assertFalse(as.getFundings().getFundingGroup().get(0).getActivities().contains(f1));
    assertTrue(as.getFundings().getFundingGroup().get(0).getActivities().contains(f2));
    assertFalse(as.getFundings().getFundingGroup().get(0).getActivities().contains(f3));
    assertEquals(2, as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertFalse(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_1)));
    assertTrue(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_2)));
    assertFalse(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_3)));
    assertTrue(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_SHARED)));
    // Check peer reviews
    assertEquals(1, as.getPeerReviews().getPeerReviewGroup().size());
    assertEquals(1, as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().size());
    assertFalse(as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().contains(p1));
    assertTrue(as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().contains(p2));
    assertFalse(as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().contains(p3));
    assertEquals(1, as.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertTrue(as.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_SHARED, "peer-review")));
    // Check works
    assertEquals(1, as.getWorks().getWorkGroup().size());
    assertEquals(1, as.getWorks().getWorkGroup().get(0).getActivities().size());
    assertFalse(as.getWorks().getWorkGroup().get(0).getActivities().contains(w1));
    assertTrue(as.getWorks().getWorkGroup().get(0).getActivities().contains(w2));
    assertFalse(as.getWorks().getWorkGroup().get(0).getActivities().contains(w3));
    assertEquals(2, as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertFalse(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_1)));
    assertTrue(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_2)));
    assertFalse(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_3)));
    assertTrue(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_SHARED)));
}

Example 67 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class PublicV2ApiServiceDelegatorImpl method viewPeerReviewSummary.

@Override
public Response viewPeerReviewSummary(String orcid, Long putCode) {
    PeerReviewSummary summary = peerReviewManagerReadOnly.getPeerReviewSummary(orcid, putCode);
    publicAPISecurityManagerV2.checkIsPublic(summary);
    ActivityUtils.setPathToActivity(summary, orcid);
    sourceUtilsReadOnly.setSourceName(summary);
    return Response.ok(summary).build();
}

Example 68 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class ActivitiesGroup method belongsToGroup.

@Deprecated
public /**
 * This method is only used by tests to confirm accuracy of ActivitiesGroupGenerator and should not be used in production
 *
 * @param activity
 * @return
 */
boolean belongsToGroup(GroupableActivity activity) {
    boolean isPeerReview = PeerReviewSummary.class.isAssignableFrom(activity.getClass());
    // If there are no grouping keys
    if (groupKeys == null || groupKeys.isEmpty()) {
        if (isPeerReview) {
            return false;
        } else {
            if (activity.getExternalIdentifiers() == null || activity.getExternalIdentifiers().getExternalIdentifier() == null || activity.getExternalIdentifiers().getExternalIdentifier().isEmpty()) {
                // If the activity doesn't have any external identifier, check if the activity is in the group
                if (activities.contains(activity))
                    return true;
                else
                    return false;
            } else {
                // If any of the activities pass the grouping validation, the activity must belong to other group
                for (GroupAble extId : activity.getExternalIdentifiers().getExternalIdentifier()) {
                    if (extId.isGroupAble())
                        return false;
                }
                // If none of the activities pass the groupings validation, so, lets check if the group actually contains the activity
                if (activities.contains(activity))
                    return true;
                else
                    return false;
            }
        }
    }
    if (isPeerReview) {
        PeerReviewSummary peerReviewSummary = (PeerReviewSummary) activity;
        PeerReviewGroupKey prgk = new PeerReviewGroupKey();
        prgk.setGroupId(peerReviewSummary.getGroupId());
        if (prgk.isGroupAble()) {
            if (groupKeys.contains(prgk)) {
                return true;
            }
        }
    } else {
        // Check existing keys
        ExternalIdentifiersContainer container = activity.getExternalIdentifiers();
        if (container != null) {
            List<? extends GroupAble> extIds = (List<? extends GroupAble>) container.getExternalIdentifier();
            for (GroupAble extId : extIds) {
                // First check keys restrictions
                if (extId.isGroupAble()) {
                    // If any of the keys already exists on this group, return true
                    if (containsKey(extId))
                        return true;
                }
            }
        }
    }
    return false;
}

Example 69 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class PeerReviewManagerTest method testGroupPeerReviews.

@Test
public void testGroupPeerReviews() {
    /**
     * They should be grouped as
     *
     * Group 1: ext-id-1 + ext-id-4
     * Group 2: ext-id-2 + ext-id-5
     * Group 3: ext-id-3
     * Group 4: ext-id-6
     */
    PeerReviewSummary s1 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-1", Visibility.PUBLIC);
    PeerReviewSummary s2 = getPeerReviewSummary("peer-review-group-id-2", "ext-id-2", Visibility.LIMITED);
    PeerReviewSummary s3 = getPeerReviewSummary("peer-review-group-id-3", "ext-id-3", Visibility.PRIVATE);
    PeerReviewSummary s4 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-4", Visibility.PRIVATE);
    PeerReviewSummary s5 = getPeerReviewSummary("peer-review-group-id-2", "ext-id-5", Visibility.PUBLIC);
    PeerReviewSummary s6 = getPeerReviewSummary("peer-review-group-id-4", "ext-id-6", Visibility.PRIVATE);
    List<PeerReviewSummary> peerReviewList1 = Arrays.asList(s1, s2, s3, s4, s5, s6);
    PeerReviews peerReviews1 = peerReviewManager.groupPeerReviews(peerReviewList1, false);
    assertNotNull(peerReviews1);
    assertEquals(4, peerReviews1.getPeerReviewGroup().size());
    // Group 1 have group1
    assertEquals(2, peerReviews1.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-1", peerReviews1.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    // Group 2 have group2
    assertEquals(2, peerReviews1.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-2", peerReviews1.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    // Group 3 have group3
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-3", peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().get(0).getValue());
    // Group 4 have group4
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-4", peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().get(0).getValue());
    PeerReviewSummary s7 = getPeerReviewSummary("peer-review-group-id-1", "ext-id-7", Visibility.PRIVATE);
    /**
     * Now, they should be grouped as
     *
     * Group 1: ext-id-1 + ext-id-4 + ext-id-7
     * Group 2: ext-id-2 + ext-id-5
     * Group 3: ext-id-3
     * Group 4: ext-id-6
     */
    List<PeerReviewSummary> peerReviewList2 = Arrays.asList(s1, s2, s3, s4, s5, s6, s7);
    PeerReviews peerReviews2 = peerReviewManager.groupPeerReviews(peerReviewList2, false);
    assertNotNull(peerReviews2);
    assertEquals(4, peerReviews2.getPeerReviewGroup().size());
    // Group 1 have peer-review-group-id-1, so, it will now have 1 more
    assertEquals(3, peerReviews2.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertEquals(1, peerReviews2.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-1", peerReviews2.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    // Group 2 have peer-review-group-id-2
    assertEquals(2, peerReviews2.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals(1, peerReviews2.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-2", peerReviews2.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    // Group 3 have peer-review-group-id-3
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-3", peerReviews1.getPeerReviewGroup().get(2).getIdentifiers().getExternalIdentifier().get(0).getValue());
    // Group 4 have peer-review-group-id-4
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getPeerReviewSummary().size());
    assertEquals(1, peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().size());
    assertEquals("peer-review-group-id-4", peerReviews1.getPeerReviewGroup().get(3).getIdentifiers().getExternalIdentifier().get(0).getValue());
}

Example 70 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class PeerReviewManagerTest method testGroupPeerReviews_groupOnlyPublicPeerReviews2.

@Test
public void testGroupPeerReviews_groupOnlyPublicPeerReviews2() {
    PeerReviewSummary s1 = getPeerReviewSummary("public-peer-review-group-id-1", "ext-id-1", Visibility.PUBLIC);
    PeerReviewSummary s2 = getPeerReviewSummary("limited-peer-review-group-id-1", "ext-id-2", Visibility.LIMITED);
    PeerReviewSummary s3 = getPeerReviewSummary("private-peer-review-group-id-1", "ext-id-3", Visibility.PRIVATE);
    PeerReviewSummary s4 = getPeerReviewSummary("public-peer-review-group-id-1", "ext-id-4", Visibility.PUBLIC);
    PeerReviewSummary s5 = getPeerReviewSummary("limited-peer-review-group-id-1", "ext-id-5", Visibility.LIMITED);
    PeerReviewSummary s6 = getPeerReviewSummary("private-peer-review-group-id-1", "ext-id-6", Visibility.PRIVATE);
    PeerReviewSummary s7 = getPeerReviewSummary("public-peer-review-group-id-2", "ext-id-7", Visibility.PUBLIC);
    PeerReviewSummary s8 = getPeerReviewSummary("limited-peer-review-group-id-2", "ext-id-8", Visibility.LIMITED);
    PeerReviewSummary s9 = getPeerReviewSummary("private-peer-review-group-id-2", "ext-id-9", Visibility.PRIVATE);
    List<PeerReviewSummary> peerReviewList = Arrays.asList(s1, s2, s3, s4, s5, s6, s7, s8, s9);
    /**
     * They should be grouped as
     *
     * Group 1: ext-id-1 + ext-id-4
     * Group 2: ext-id-7
     */
    PeerReviews peerReviews = peerReviewManager.groupPeerReviews(peerReviewList, true);
    assertNotNull(peerReviews);
    assertEquals(2, peerReviews.getPeerReviewGroup().size());
    assertEquals(1, peerReviews.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("public-peer-review-group-id-1", peerReviews.getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(2, peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertThat(peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getValue(), anyOf(is("ext-id-1"), is("ext-id-4")));
    assertThat(peerReviews.getPeerReviewGroup().get(0).getPeerReviewSummary().get(1).getExternalIdentifiers().getExternalIdentifier().get(0).getValue(), anyOf(is("ext-id-1"), is("ext-id-4")));
    assertEquals(1, peerReviews.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().size());
    assertEquals("public-peer-review-group-id-2", peerReviews.getPeerReviewGroup().get(1).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(1, peerReviews.getPeerReviewGroup().get(1).getPeerReviewSummary().size());
    assertEquals("ext-id-7", peerReviews.getPeerReviewGroup().get(1).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getValue());
}