Examples with PeerReviewSummary org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary used on opensource projects

Example 21 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class MapperFacadeFactory method getPeerReviewMapperFacade.

public MapperFacade getPeerReviewMapperFacade() {
    MapperFactory mapperFactory = new DefaultMapperFactory.Builder().build();
    ConverterFactory converterFactory = mapperFactory.getConverterFactory();
    converterFactory.registerConverter("workExternalIdentifiersConverterId", new WorkExternalIDsConverter());
    converterFactory.registerConverter("workExternalIdentifierConverterId", new PeerReviewWorkExternalIDConverter());
    //do same as work
    ClassMapBuilder<PeerReview, PeerReviewEntity> classMap = mapperFactory.classMap(PeerReview.class, PeerReviewEntity.class);
    addV2CommonFields(classMap);
    registerSourceConverters(mapperFactory, classMap);
    classMap.field("url.value", "url");
    classMap.field("organization.name", "org.name");
    classMap.field("organization.address.city", "org.city");
    classMap.field("organization.address.region", "org.region");
    classMap.field("organization.address.country", "org.country");
    classMap.field("organization.disambiguatedOrganization.disambiguatedOrganizationIdentifier", "org.orgDisambiguated.sourceId");
    classMap.field("organization.disambiguatedOrganization.disambiguationSource", "org.orgDisambiguated.sourceType");
    classMap.field("groupId", "groupId");
    classMap.field("subjectType", "subjectType");
    classMap.field("subjectUrl.value", "subjectUrl");
    classMap.field("subjectName.title.content", "subjectName");
    classMap.field("subjectName.translatedTitle.content", "subjectTranslatedName");
    classMap.field("subjectName.translatedTitle.languageCode", "subjectTranslatedNameLanguageCode");
    classMap.field("subjectContainerName.content", "subjectContainerName");
    classMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    classMap.fieldMap("subjectExternalIdentifier", "subjectExternalIdentifiersJson").converter("workExternalIdentifierConverterId").add();
    classMap.register();
    ClassMapBuilder<PeerReviewSummary, PeerReviewEntity> peerReviewSummaryClassMap = mapperFactory.classMap(PeerReviewSummary.class, PeerReviewEntity.class);
    addV2CommonFields(peerReviewSummaryClassMap);
    registerSourceConverters(mapperFactory, peerReviewSummaryClassMap);
    peerReviewSummaryClassMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    peerReviewSummaryClassMap.field("organization.name", "org.name");
    peerReviewSummaryClassMap.field("organization.address.city", "org.city");
    peerReviewSummaryClassMap.field("organization.address.region", "org.region");
    peerReviewSummaryClassMap.field("organization.address.country", "org.country");
    peerReviewSummaryClassMap.field("organization.disambiguatedOrganization.disambiguatedOrganizationIdentifier", "org.orgDisambiguated.sourceId");
    peerReviewSummaryClassMap.field("organization.disambiguatedOrganization.disambiguationSource", "org.orgDisambiguated.sourceType");
    peerReviewSummaryClassMap.register();
    mapperFactory.classMap(FuzzyDate.class, CompletionDateEntity.class).field("year.value", "year").field("month.value", "month").field("day.value", "day").register();
    return mapperFactory.getMapperFacade();
}

Example 22 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class ActivitiesSummaryManagerReadOnlyImpl method getActivitiesSummary.

public ActivitiesSummary getActivitiesSummary(String orcid, boolean justPublic) {
    long lastModifiedTime = getLastModified(orcid);
    ActivitiesSummary activities = new ActivitiesSummary();
    // Set educations
    List<EducationSummary> educationsList = affiliationsManager.getEducationSummaryList(orcid, lastModifiedTime);
    Educations educations = new Educations();
    for (EducationSummary summary : educationsList) {
        if (justPublic) {
            if (Visibility.PUBLIC.equals(summary.getVisibility())) {
                educations.getSummaries().add(summary);
            }
        } else {
            educations.getSummaries().add(summary);
        }
    }
    activities.setEducations(educations);
    // Set employments
    List<EmploymentSummary> employmentList = affiliationsManager.getEmploymentSummaryList(orcid, lastModifiedTime);
    Employments employments = new Employments();
    for (EmploymentSummary summary : employmentList) {
        if (justPublic) {
            if (Visibility.PUBLIC.equals(summary.getVisibility())) {
                employments.getSummaries().add(summary);
            }
        } else {
            employments.getSummaries().add(summary);
        }
    }
    activities.setEmployments(employments);
    // Set fundings
    List<FundingSummary> fundingSummaries = fundingManager.getFundingSummaryList(orcid, lastModifiedTime);
    Fundings fundings = fundingManager.groupFundings(fundingSummaries, justPublic);
    activities.setFundings(fundings);
    // Set peer reviews
    List<PeerReviewSummary> peerReviewSummaries = peerReviewManager.getPeerReviewSummaryList(orcid, lastModifiedTime);
    PeerReviews peerReviews = peerReviewManager.groupPeerReviews(peerReviewSummaries, justPublic);
    activities.setPeerReviews(peerReviews);
    // Set works
    List<WorkSummary> workSummaries = workManager.getWorksSummaryList(orcid, lastModifiedTime);
    Works works = workManager.groupWorks(workSummaries, justPublic);
    activities.setWorks(works);
    return activities;
}

Example 23 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class OrcidSecurityManagerTestBase method createPeerReviewSummary.

protected PeerReviewSummary createPeerReviewSummary(Visibility v, String sourceId, String extIdValue) {
    PeerReviewSummary p = new PeerReviewSummary();
    p.setVisibility(v);
    p.setGroupId(EXTID_SHARED);
    setSource(p, sourceId);
    ExternalID extId = new ExternalID();
    extId.setValue(extIdValue);
    ExternalIDs extIds = new ExternalIDs();
    extIds.getExternalIdentifier().add(extId);
    addSharedExtId(extIds);
    p.setExternalIdentifiers(extIds);
    return p;
}

Example 24 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class OrcidSecurityManager_ActivitiesSummaryTest method testActivitiesSummary_When_AllReadLimited_And_NotSource.

@Test
public void testActivitiesSummary_When_AllReadLimited_And_NotSource() {
    SecurityContextTestUtils.setUpSecurityContext(ORCID_1, CLIENT_1, ScopePathType.AFFILIATIONS_READ_LIMITED, ScopePathType.FUNDING_READ_LIMITED, ScopePathType.PEER_REVIEW_READ_LIMITED, ScopePathType.ORCID_WORKS_READ_LIMITED);
    EducationSummary e1 = createEducationSummary(Visibility.PUBLIC, CLIENT_2);
    EducationSummary e2 = createEducationSummary(Visibility.LIMITED, CLIENT_2);
    EducationSummary e3 = createEducationSummary(Visibility.PRIVATE, CLIENT_2);
    EmploymentSummary em1 = createEmploymentSummary(Visibility.PUBLIC, CLIENT_2);
    EmploymentSummary em2 = createEmploymentSummary(Visibility.LIMITED, CLIENT_2);
    EmploymentSummary em3 = createEmploymentSummary(Visibility.PRIVATE, CLIENT_2);
    FundingSummary f1 = createFundingSummary(Visibility.PUBLIC, CLIENT_2, EXTID_1);
    FundingSummary f2 = createFundingSummary(Visibility.LIMITED, CLIENT_2, EXTID_2);
    FundingSummary f3 = createFundingSummary(Visibility.PRIVATE, CLIENT_2, EXTID_3);
    PeerReviewSummary p1 = createPeerReviewSummary(Visibility.PUBLIC, CLIENT_2, EXTID_1);
    PeerReviewSummary p2 = createPeerReviewSummary(Visibility.LIMITED, CLIENT_2, EXTID_2);
    PeerReviewSummary p3 = createPeerReviewSummary(Visibility.PRIVATE, CLIENT_2, EXTID_3);
    WorkSummary w1 = createWorkSummary(Visibility.PUBLIC, CLIENT_2, EXTID_1);
    WorkSummary w2 = createWorkSummary(Visibility.LIMITED, CLIENT_2, EXTID_2);
    WorkSummary w3 = createWorkSummary(Visibility.PRIVATE, CLIENT_2, EXTID_3);
    ActivitiesSummary as = new ActivitiesSummary();
    as.setEducations(createEducations(e1, e2, e3));
    as.setEmployments(createEmployments(em1, em2, em3));
    as.setFundings(createFundings(f1, f2, f3));
    as.setPeerReviews(createPeerReviews(p1, p2, p3));
    as.setWorks(createWorks(w1, w2, w3));
    orcidSecurityManager.checkAndFilter(ORCID_1, as);
    // Check it have limited Educations
    assertNotNull(as.getEducations());
    assertEquals(2, as.getEducations().getSummaries().size());
    assertTrue(as.getEducations().getSummaries().contains(e1));
    assertTrue(as.getEducations().getSummaries().contains(e2));
    assertFalse(as.getEducations().getSummaries().contains(e3));
    // Check it have limited Employments
    assertNotNull(as.getEmployments());
    assertEquals(2, as.getEmployments().getSummaries().size());
    assertTrue(as.getEmployments().getSummaries().contains(em1));
    assertTrue(as.getEmployments().getSummaries().contains(em2));
    assertFalse(as.getEmployments().getSummaries().contains(em3));
    // Check it have limited funding
    assertNotNull(as.getFundings());
    assertEquals(1, as.getFundings().getFundingGroup().size());
    assertEquals(2, as.getFundings().getFundingGroup().get(0).getActivities().size());
    assertTrue(as.getFundings().getFundingGroup().get(0).getActivities().contains(f1));
    assertTrue(as.getFundings().getFundingGroup().get(0).getActivities().contains(f2));
    assertFalse(as.getFundings().getFundingGroup().get(0).getActivities().contains(f3));
    assertEquals(3, as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertTrue(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_1)));
    assertTrue(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_2)));
    assertFalse(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_3)));
    assertTrue(as.getFundings().getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_SHARED)));
    // Check it have limited reviews
    assertNotNull(as.getPeerReviews());
    assertEquals(1, as.getPeerReviews().getPeerReviewGroup().size());
    assertEquals(2, as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().size());
    assertTrue(as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().contains(p1));
    assertTrue(as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().contains(p2));
    assertFalse(as.getPeerReviews().getPeerReviewGroup().get(0).getActivities().contains(p3));
    assertEquals(1, as.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertTrue(as.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_SHARED, "peer-review")));
    // Check it have limited works
    assertNotNull(as.getWorks());
    assertEquals(1, as.getWorks().getWorkGroup().size());
    assertEquals(2, as.getWorks().getWorkGroup().get(0).getActivities().size());
    assertTrue(as.getWorks().getWorkGroup().get(0).getActivities().contains(w1));
    assertTrue(as.getWorks().getWorkGroup().get(0).getActivities().contains(w2));
    assertFalse(as.getWorks().getWorkGroup().get(0).getActivities().contains(w3));
    assertEquals(3, as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertTrue(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_1)));
    assertTrue(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_2)));
    assertFalse(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_3)));
    assertTrue(as.getWorks().getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().contains(getExtId(EXTID_SHARED)));
}

Example 25 with PeerReviewSummary

use of org.orcid.jaxb.model.record.summary_rc3.PeerReviewSummary in project ORCID-Source by ORCID.

the class OrcidSecurityManager_ActivitiesSummaryTest method testActivitiesSummary_When_AllPrivate_NoSource_ReadPublicToken.

@Test
public void testActivitiesSummary_When_AllPrivate_NoSource_ReadPublicToken() {
    SecurityContextTestUtils.setUpSecurityContext(ORCID_1, CLIENT_1, ScopePathType.READ_PUBLIC);
    EducationSummary e1 = createEducationSummary(Visibility.PRIVATE, CLIENT_2);
    EducationSummary e2 = createEducationSummary(Visibility.PRIVATE, CLIENT_2);
    EducationSummary e3 = createEducationSummary(Visibility.PRIVATE, CLIENT_2);
    EmploymentSummary em1 = createEmploymentSummary(Visibility.PRIVATE, CLIENT_2);
    EmploymentSummary em2 = createEmploymentSummary(Visibility.PRIVATE, CLIENT_2);
    EmploymentSummary em3 = createEmploymentSummary(Visibility.PRIVATE, CLIENT_2);
    FundingSummary f1 = createFundingSummary(Visibility.PRIVATE, CLIENT_2, EXTID_1);
    FundingSummary f2 = createFundingSummary(Visibility.PRIVATE, CLIENT_2, EXTID_2);
    FundingSummary f3 = createFundingSummary(Visibility.PRIVATE, CLIENT_2, EXTID_3);
    PeerReviewSummary p1 = createPeerReviewSummary(Visibility.PRIVATE, CLIENT_2, EXTID_1);
    PeerReviewSummary p2 = createPeerReviewSummary(Visibility.PRIVATE, CLIENT_2, EXTID_2);
    PeerReviewSummary p3 = createPeerReviewSummary(Visibility.PRIVATE, CLIENT_2, EXTID_3);
    WorkSummary w1 = createWorkSummary(Visibility.PRIVATE, CLIENT_2, EXTID_1);
    WorkSummary w2 = createWorkSummary(Visibility.PRIVATE, CLIENT_2, EXTID_2);
    WorkSummary w3 = createWorkSummary(Visibility.PRIVATE, CLIENT_2, EXTID_3);
    ActivitiesSummary as = new ActivitiesSummary();
    as.setEducations(createEducations(e1, e2, e3));
    as.setEmployments(createEmployments(em1, em2, em3));
    as.setFundings(createFundings(f1, f2, f3));
    as.setPeerReviews(createPeerReviews(p1, p2, p3));
    as.setWorks(createWorks(w1, w2, w3));
    orcidSecurityManager.checkAndFilter(ORCID_1, as);
    assertNotNull(as);
    // Check educations
    assertEquals(0, as.getEducations().getSummaries().size());
    // Check employments
    assertEquals(0, as.getEmployments().getSummaries().size());
    // Check fundings
    assertEquals(0, as.getFundings().getFundingGroup().size());
    // Check peer reviews
    assertEquals(0, as.getPeerReviews().getPeerReviewGroup().size());
    // Check works
    assertEquals(0, as.getWorks().getWorkGroup().size());
}