Examples with PeerReview org.orcid.jaxb.model.record_rc3.PeerReview used on opensource projects

Example 31 with PeerReview

use of org.orcid.jaxb.model.record_rc3.PeerReview in project ORCID-Source by ORCID.

the class MemberV2ApiServiceDelegator_GeneralTest method testOrcidProfileCreate_CANT_UpdateOnClaimedAccounts.

@Test
public void testOrcidProfileCreate_CANT_UpdateOnClaimedAccounts() {
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    Response response = serviceDelegator.viewAddress(ORCID, 9L);
    assertNotNull(response);
    Address a = (Address) response.getEntity();
    assertNotNull(a);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateAddress(ORCID, a.getPutCode(), a);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewEducation(ORCID, 20L);
    assertNotNull(response);
    Education edu = (Education) response.getEntity();
    assertNotNull(edu);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateEducation(ORCID, edu.getPutCode(), edu);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewEmployment(ORCID, 17L);
    assertNotNull(response);
    Employment emp = (Employment) response.getEntity();
    assertNotNull(emp);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateEmployment(ORCID, emp.getPutCode(), emp);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewExternalIdentifier(ORCID, 13L);
    assertNotNull(response);
    PersonExternalIdentifier extId = (PersonExternalIdentifier) response.getEntity();
    assertNotNull(extId);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateExternalIdentifier(ORCID, extId.getPutCode(), extId);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewFunding(ORCID, 10L);
    assertNotNull(response);
    Funding f = (Funding) response.getEntity();
    assertNotNull(f);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateFunding(ORCID, f.getPutCode(), f);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewKeyword(ORCID, 9L);
    assertNotNull(response);
    Keyword k = (Keyword) response.getEntity();
    assertNotNull(k);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateKeyword(ORCID, k.getPutCode(), k);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewOtherName(ORCID, 13L);
    assertNotNull(response);
    OtherName o = (OtherName) response.getEntity();
    assertNotNull(o);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateOtherName(ORCID, o.getPutCode(), o);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewPeerReview(ORCID, 9L);
    assertNotNull(response);
    PeerReview p = (PeerReview) response.getEntity();
    assertNotNull(p);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updatePeerReview(ORCID, p.getPutCode(), p);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewResearcherUrl(ORCID, 13L);
    assertNotNull(response);
    ResearcherUrl r = (ResearcherUrl) response.getEntity();
    assertNotNull(r);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateResearcherUrl(ORCID, r.getPutCode(), r);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    response = serviceDelegator.viewWork(ORCID, 11L);
    assertNotNull(response);
    Work w = (Work) response.getEntity();
    assertNotNull(w);
    try {
        SecurityContextTestUtils.setUpSecurityContextForClientOnly();
        serviceDelegator.updateWork(ORCID, w.getPutCode(), w);
        fail();
    } catch (IllegalStateException e) {
        assertEquals("Non client credential scope found in client request", e.getMessage());
    }
}

Example 32 with PeerReview

use of org.orcid.jaxb.model.record_rc3.PeerReview in project ORCID-Source by ORCID.

the class MemberV2ApiServiceDelegator_PeerReviewsTest method testAddPeerReviewWithSameExtIdValueButDifferentExtIdType.

@Test
public void testAddPeerReviewWithSameExtIdValueButDifferentExtIdType() {
    SecurityContextTestUtils.setUpSecurityContext("4444-4444-4444-4444", ScopePathType.READ_LIMITED, ScopePathType.ACTIVITIES_UPDATE);
    PeerReview peerReview1 = new PeerReview();
    ExternalIDs weis1 = new ExternalIDs();
    ExternalID wei1 = new ExternalID();
    wei1.setRelationship(null);
    wei1.setValue("same_but_different_type");
    wei1.setType(WorkExternalIdentifierType.DOI.value());
    weis1.getExternalIdentifier().add(wei1);
    peerReview1.setExternalIdentifiers(weis1);
    peerReview1.setGroupId("issn:0000003");
    peerReview1.setOrganization(Utils.getOrganization());
    peerReview1.setRole(Role.CHAIR);
    peerReview1.setSubjectContainerName(new Title("subject-container-name"));
    peerReview1.setSubjectExternalIdentifier(wei1);
    WorkTitle workTitle1 = new WorkTitle();
    workTitle1.setTitle(new Title("work-title"));
    peerReview1.setSubjectName(workTitle1);
    peerReview1.setSubjectType(WorkType.DATA_SET);
    peerReview1.setType(PeerReviewType.EVALUATION);
    Response response1 = serviceDelegator.createPeerReview("4444-4444-4444-4444", peerReview1);
    assertNotNull(response1);
    assertEquals(Response.Status.CREATED.getStatusCode(), response1.getStatus());
    Map<?, ?> map = response1.getMetadata();
    assertNotNull(map);
    assertTrue(map.containsKey("Location"));
    List<?> resultWithPutCode = (List<?>) map.get("Location");
    Long putCode1 = Long.valueOf(String.valueOf(resultWithPutCode.get(0)));
    PeerReview peerReview2 = new PeerReview();
    ExternalIDs weis2 = new ExternalIDs();
    ExternalID wei2 = new ExternalID();
    wei2.setRelationship(null);
    // Same value
    wei2.setValue("same_but_different_type");
    // But different
    wei2.setType(WorkExternalIdentifierType.ARXIV.value());
    // type
    weis2.getExternalIdentifier().add(wei2);
    peerReview2.setExternalIdentifiers(weis2);
    peerReview2.setGroupId("issn:0000003");
    peerReview2.setOrganization(Utils.getOrganization());
    peerReview2.setRole(Role.CHAIR);
    peerReview2.setSubjectContainerName(new Title("subject-container-name"));
    peerReview2.setSubjectExternalIdentifier(wei2);
    WorkTitle workTitle2 = new WorkTitle();
    workTitle2.setTitle(new Title("work-title"));
    peerReview2.setSubjectName(workTitle2);
    peerReview2.setSubjectType(WorkType.DATA_SET);
    peerReview2.setType(PeerReviewType.EVALUATION);
    Response response2 = serviceDelegator.createPeerReview("4444-4444-4444-4444", peerReview2);
    assertNotNull(response2);
    assertEquals(Response.Status.CREATED.getStatusCode(), response2.getStatus());
    map = response2.getMetadata();
    assertNotNull(map);
    assertTrue(map.containsKey("Location"));
    resultWithPutCode = (List<?>) map.get("Location");
    Long putCode2 = Long.valueOf(String.valueOf(resultWithPutCode.get(0)));
    // Delete new peer reviews so they don't affect other tests
    serviceDelegator.deletePeerReview("4444-4444-4444-4444", putCode1);
    serviceDelegator.deletePeerReview("4444-4444-4444-4444", putCode2);
}

Example 33 with PeerReview

use of org.orcid.jaxb.model.record_rc3.PeerReview in project ORCID-Source by ORCID.

the class ActivityCacheManagerImpl method pubPeerReviewsMap.

@Cacheable(value = "pub-peer-reviews-maps", key = "#orcid.concat('-').concat(#lastModified)")
public LinkedHashMap<Long, PeerReview> pubPeerReviewsMap(String orcid, long lastModified) {
    List<PeerReview> peerReviews = peerReviewManager.findPeerReviews(orcid, lastModified);
    LinkedHashMap<Long, PeerReview> peerReviewMap = new LinkedHashMap<>();
    if (peerReviews != null) {
        if (!peerReviews.isEmpty()) {
            for (PeerReview peerReview : peerReviews) {
                if (peerReview.getVisibility().equals(Visibility.PUBLIC)) {
                    peerReviewMap.put(peerReview.getPutCode(), peerReview);
                }
            }
        }
    }
    return peerReviewMap;
}

Example 34 with PeerReview

use of org.orcid.jaxb.model.record_rc3.PeerReview in project ORCID-Source by ORCID.

the class PeerReviewManagerImpl method createPeerReview.

@Override
public PeerReview createPeerReview(String orcid, PeerReview peerReview, boolean isApiRequest) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    // If request comes from the API, perform the validations
    if (isApiRequest) {
        // Validate it have at least one ext id
        activityValidator.validatePeerReview(peerReview, sourceEntity, true, isApiRequest, null);
        List<PeerReviewEntity> peerReviews = peerReviewDao.getByUser(orcid);
        // duplicates
        if (!sourceEntity.getSourceId().equals(orcid)) {
            if (peerReviews != null) {
                for (PeerReviewEntity entity : peerReviews) {
                    PeerReview existing = jpaJaxbPeerReviewAdapter.toPeerReview(entity);
                    activityValidator.checkExternalIdentifiersForDuplicates(peerReview.getExternalIdentifiers(), existing.getExternalIdentifiers(), existing.getSource(), sourceEntity);
                }
            }
        } else {
            //check vocab of external identifiers
            externalIDValidator.validateWorkOrPeerReview(peerReview.getExternalIdentifiers());
            externalIDValidator.validateWorkOrPeerReview(peerReview.getSubjectExternalIdentifier());
        }
        validateGroupId(peerReview);
    }
    PeerReviewEntity entity = jpaJaxbPeerReviewAdapter.toPeerReviewEntity(peerReview);
    // Updates the give organization with the latest organization from
    // database
    OrgEntity updatedOrganization = orgManager.getOrgEntity(peerReview);
    entity.setOrg(updatedOrganization);
    //Set the source
    if (sourceEntity.getSourceProfile() != null) {
        entity.setSourceId(sourceEntity.getSourceProfile().getId());
    }
    if (sourceEntity.getSourceClient() != null) {
        entity.setClientSourceId(sourceEntity.getSourceClient().getId());
    }
    ProfileEntity profile = profileEntityCacheManager.retrieve(orcid);
    entity.setProfile(profile);
    setIncomingPrivacy(entity, profile);
    DisplayIndexCalculatorHelper.setDisplayIndexOnNewEntity(entity, isApiRequest);
    peerReviewDao.persist(entity);
    peerReviewDao.flush();
    notificationManager.sendAmendEmail(orcid, AmendedSection.PEER_REVIEW, createItem(entity));
    return jpaJaxbPeerReviewAdapter.toPeerReview(entity);
}

Example 35 with PeerReview

use of org.orcid.jaxb.model.record_rc3.PeerReview in project ORCID-Source by ORCID.

the class PeerReviewManagerImpl method updatePeerReview.

@Override
public PeerReview updatePeerReview(String orcid, PeerReview peerReview, boolean isApiRequest) {
    PeerReviewEntity existingEntity = peerReviewDao.getPeerReview(orcid, peerReview.getPutCode());
    Visibility originalVisibility = existingEntity.getVisibility();
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    //Save the original source
    String existingSourceId = existingEntity.getSourceId();
    String existingClientSourceId = existingEntity.getClientSourceId();
    // If request comes from the API perform validations
    if (isApiRequest) {
        activityValidator.validatePeerReview(peerReview, sourceEntity, false, isApiRequest, originalVisibility);
        validateGroupId(peerReview);
        List<PeerReview> existingReviews = this.findPeerReviews(orcid, System.currentTimeMillis());
        for (PeerReview existing : existingReviews) {
            // Dont compare the updated peer review with the DB version
            if (!existing.getPutCode().equals(peerReview.getPutCode())) {
                activityValidator.checkExternalIdentifiersForDuplicates(peerReview.getExternalIdentifiers(), existing.getExternalIdentifiers(), existing.getSource(), sourceManager.retrieveSourceEntity());
            }
        }
    } else {
        //check vocab of external identifiers
        externalIDValidator.validateWorkOrPeerReview(peerReview.getExternalIdentifiers());
        externalIDValidator.validateWorkOrPeerReview(peerReview.getSubjectExternalIdentifier());
    }
    PeerReviewEntity updatedEntity = new PeerReviewEntity();
    orcidSecurityManager.checkSource(existingEntity);
    jpaJaxbPeerReviewAdapter.toPeerReviewEntity(peerReview, updatedEntity);
    updatedEntity.setProfile(new ProfileEntity(orcid));
    updatedEntity.setVisibility(originalVisibility);
    //Be sure it doesn't overwrite the source
    updatedEntity.setSourceId(existingSourceId);
    updatedEntity.setClientSourceId(existingClientSourceId);
    OrgEntity updatedOrganization = orgManager.getOrgEntity(peerReview);
    updatedEntity.setOrg(updatedOrganization);
    updatedEntity = peerReviewDao.merge(updatedEntity);
    peerReviewDao.flush();
    notificationManager.sendAmendEmail(orcid, AmendedSection.PEER_REVIEW, createItem(updatedEntity));
    return jpaJaxbPeerReviewAdapter.toPeerReview(updatedEntity);
}