use of org.orcid.jaxb.model.record_rc4.Biography in project ORCID-Source by ORCID.
the class ValidateV2_1SamplesTest method testMarshallBiography.
@Test
public void testMarshallBiography() throws JAXBException, SAXException, URISyntaxException {
Biography object = (Biography) unmarshallFromPath("/record_2.1/samples/read_samples/biography-2.1.xml", Biography.class);
marshall(object, "/record_2.1/personal-details-2.1.xsd");
}
use of org.orcid.jaxb.model.record_rc4.Biography in project ORCID-Source by ORCID.
the class ValidateV2SamplesTest method unmarshallFromPath.
private Object unmarshallFromPath(String path, Class<?> type, String schemaPath) throws SAXException, URISyntaxException {
try (Reader reader = new InputStreamReader(getClass().getResourceAsStream(path))) {
Object obj = unmarshall(reader, type, schemaPath);
Object result = null;
if (ResearcherUrls.class.equals(type)) {
result = (ResearcherUrls) obj;
} else if (ResearcherUrl.class.equals(type)) {
result = (ResearcherUrl) obj;
} else if (PersonalDetails.class.equals(type)) {
result = (PersonalDetails) obj;
} else if (PersonExternalIdentifier.class.equals(type)) {
result = (PersonExternalIdentifier) obj;
} else if (PersonExternalIdentifiers.class.equals(type)) {
result = (PersonExternalIdentifiers) obj;
} else if (Biography.class.equals(type)) {
result = (Biography) obj;
} else if (Name.class.equals(type)) {
result = (Name) obj;
} else if (CreditName.class.equals(type)) {
result = (CreditName) obj;
} else if (OtherName.class.equals(type)) {
result = (OtherName) obj;
} else if (OtherNames.class.equals(type)) {
result = (OtherNames) obj;
} else if (Keywords.class.equals(type)) {
result = (Keywords) obj;
} else if (Keyword.class.equals(type)) {
result = (Keyword) obj;
} else if (Addresses.class.equals(type)) {
result = (Addresses) obj;
} else if (Address.class.equals(type)) {
result = (Address) obj;
} else if (Emails.class.equals(type)) {
result = (Emails) obj;
} else if (Email.class.equals(type)) {
result = (Email) obj;
} else if (Person.class.equals(type)) {
result = (Person) obj;
} else if (Deprecated.class.equals(type)) {
result = (Deprecated) obj;
} else if (Preferences.class.equals(type)) {
result = (Preferences) obj;
} else if (History.class.equals(type)) {
result = (History) obj;
} else if (Record.class.equals(type)) {
result = (Record) obj;
} else if (ActivitiesSummary.class.equals(type)) {
result = (ActivitiesSummary) obj;
} else if (Works.class.equals(type)) {
result = (Works) obj;
}
return result;
} catch (IOException e) {
throw new RuntimeException("Error reading notification from classpath", e);
}
}
use of org.orcid.jaxb.model.record_rc4.Biography in project ORCID-Source by ORCID.
the class ValidateV2SamplesTest method testUnmarshallBiography.
@Test
public void testUnmarshallBiography() throws SAXException, URISyntaxException {
Biography bio = (Biography) unmarshallFromPath("/record_2.0/samples/read_samples/biography-2.0.xml", Biography.class, "/record_2.0/personal-details-2.0.xsd");
assertNotNull(bio);
assertEquals("biography V2.0", bio.getContent());
assertEquals(Visibility.PUBLIC.value(), bio.getVisibility().value());
}
use of org.orcid.jaxb.model.record_rc4.Biography in project ORCID-Source by ORCID.
the class ProfileEntityManagerImpl method deprecateProfile.
/**
* Deprecates a profile
*
* @param deprecatedProfile
* The profile that want to be deprecated
* @param primaryProfile
* The primary profile for the deprecated profile
* @return true if the account was successfully deprecated, false otherwise
*/
@Override
@Transactional
public boolean deprecateProfile(String deprecatedOrcid, String primaryOrcid) {
boolean wasDeprecated = profileDao.deprecateProfile(deprecatedOrcid, primaryOrcid);
// If it was successfully deprecated
if (wasDeprecated) {
LOGGER.info("Account {} was deprecated to primary account: {}", deprecatedOrcid, primaryOrcid);
ProfileEntity deprecated = profileDao.find(deprecatedOrcid);
// Remove works
workManager.removeAllWorks(deprecatedOrcid);
// Remove funding
if (deprecated.getProfileFunding() != null) {
for (ProfileFundingEntity funding : deprecated.getProfileFunding()) {
fundingManager.removeProfileFunding(funding.getProfile().getId(), funding.getId());
}
}
// Remove affiliations
if (deprecated.getOrgAffiliationRelations() != null) {
for (OrgAffiliationRelationEntity affiliation : deprecated.getOrgAffiliationRelations()) {
orgAffiliationRelationDao.removeOrgAffiliationRelation(affiliation.getProfile().getId(), affiliation.getId());
}
}
// Remove external identifiers
if (deprecated.getExternalIdentifiers() != null) {
for (ExternalIdentifierEntity externalIdentifier : deprecated.getExternalIdentifiers()) {
externalIdentifierManager.deleteExternalIdentifier(deprecated.getId(), externalIdentifier.getId(), false);
}
}
// Remove researcher urls
if (deprecated.getResearcherUrls() != null) {
for (ResearcherUrlEntity rUrl : deprecated.getResearcherUrls()) {
researcherUrlManager.deleteResearcherUrl(deprecatedOrcid, rUrl.getId(), false);
}
}
// Remove other names
if (deprecated.getOtherNames() != null) {
for (OtherNameEntity otherName : deprecated.getOtherNames()) {
otherNamesManager.deleteOtherName(deprecatedOrcid, otherName.getId(), false);
}
}
// Remove keywords
if (deprecated.getKeywords() != null) {
for (ProfileKeywordEntity keyword : deprecated.getKeywords()) {
profileKeywordManager.deleteKeyword(deprecatedOrcid, keyword.getId(), false);
}
}
//Remove biography
if (biographyManager.exists(deprecatedOrcid)) {
Biography deprecatedBio = new Biography();
deprecatedBio.setContent(null);
deprecatedBio.setVisibility(Visibility.PRIVATE);
biographyManager.updateBiography(deprecatedOrcid, deprecatedBio);
}
//Set the deactivated names
if (recordNameManager.exists(deprecatedOrcid)) {
Name name = new Name();
name.setCreditName(new CreditName());
name.setGivenNames(new GivenNames("Given Names Deactivated"));
name.setFamilyName(new FamilyName("Family Name Deactivated"));
name.setVisibility(org.orcid.jaxb.model.common_v2.Visibility.PRIVATE);
name.setPath(deprecatedOrcid);
recordNameManager.updateRecordName(deprecatedOrcid, name);
}
userConnectionDao.deleteByOrcid(deprecatedOrcid);
// Move all emails to the primary email
Set<EmailEntity> deprecatedAccountEmails = deprecated.getEmails();
if (deprecatedAccountEmails != null) {
// For each email in the deprecated profile
for (EmailEntity email : deprecatedAccountEmails) {
// Delete each email from the deprecated
// profile
LOGGER.info("About to move email {} from profile {} to profile {}", new Object[] { email.getId(), deprecatedOrcid, primaryOrcid });
emailManager.moveEmailToOtherAccount(email.getId(), deprecatedOrcid, primaryOrcid);
}
}
return true;
}
return false;
}
use of org.orcid.jaxb.model.record_rc4.Biography in project ORCID-Source by ORCID.
the class OrcidSecurityManager_generalTest method testPersonalDetails_When_SomePrivate_ReadPublicToken.
@Test
public void testPersonalDetails_When_SomePrivate_ReadPublicToken() {
SecurityContextTestUtils.setUpSecurityContext(ORCID_1, CLIENT_1, ScopePathType.READ_PUBLIC);
Name name = createName(Visibility.PUBLIC);
Biography bio = createBiography(Visibility.PRIVATE);
OtherName o1 = createOtherName(Visibility.PRIVATE, CLIENT_2);
OtherName o2 = createOtherName(Visibility.PRIVATE, CLIENT_2);
OtherName o3 = createOtherName(Visibility.PUBLIC, CLIENT_2);
OtherNames otherNames = new OtherNames();
otherNames.setOtherNames(new ArrayList<OtherName>(Arrays.asList(o1, o2, o3)));
PersonalDetails p = new PersonalDetails();
p.setBiography(bio);
p.setName(name);
p.setOtherNames(otherNames);
orcidSecurityManager.checkAndFilter(ORCID_1, p);
assertNotNull(p);
assertEquals(name, p.getName());
assertNull(p.getBiography());
assertNotNull(p.getOtherNames());
assertNotNull(p.getOtherNames().getOtherNames());
assertEquals(1, p.getOtherNames().getOtherNames().size());
assertFalse(p.getOtherNames().getOtherNames().contains(o1));
assertFalse(p.getOtherNames().getOtherNames().contains(o2));
assertTrue(p.getOtherNames().getOtherNames().contains(o3));
}
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