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Example 6 with BulkElement

use of org.orcid.jaxb.model.record_rc4.BulkElement in project ORCID-Source by ORCID.

the class OrcidSecurityManagerImpl method checkAndFilter.

@Override
public void checkAndFilter(String orcid, WorkBulk workBulk, ScopePathType scopePathType) {
    isMyToken(orcid);
    List<BulkElement> bulkElements = workBulk.getBulk();
    List<BulkElement> filteredElements = new ArrayList<>();
    for (int i = 0; i < bulkElements.size(); i++) {
        BulkElement element = bulkElements.get(i);
        if (element instanceof OrcidError) {
            filteredElements.add(element);
            continue;
        }
        try {
            checkAndFilter(orcid, (Work) element, scopePathType, true);
            filteredElements.add(element);
        } catch (Exception e) {
            if (e instanceof OrcidUnauthorizedException) {
                throw e;
            }
            OrcidError error = orcidCoreExceptionMapper.getOrcidError(e);
            filteredElements.add(error);
        }
    }
    workBulk.setBulk(filteredElements);
}
Also used : OrcidError(org.orcid.jaxb.model.error_v2.OrcidError) BulkElement(org.orcid.jaxb.model.record_v2.BulkElement) OrcidUnauthorizedException(org.orcid.core.exception.OrcidUnauthorizedException) ArrayList(java.util.ArrayList) NoResultException(javax.persistence.NoResultException) OrcidNotClaimedException(org.orcid.core.exception.OrcidNotClaimedException) OrcidDeprecatedException(org.orcid.core.exception.OrcidDeprecatedException) WrongSourceException(org.orcid.core.exception.WrongSourceException) LockedException(org.orcid.core.security.aop.LockedException) AccessControlException(java.security.AccessControlException) OrcidAccessControlException(org.orcid.core.exception.OrcidAccessControlException) OrcidVisibilityException(org.orcid.core.exception.OrcidVisibilityException) OrcidUnauthorizedException(org.orcid.core.exception.OrcidUnauthorizedException)

Example 7 with BulkElement

use of org.orcid.jaxb.model.record_rc4.BulkElement in project ORCID-Source by ORCID.

the class WorkManagerTest method testCreateWorksWithBulkSomeOKSomeErrors.

@Test
public void testCreateWorksWithBulkSomeOKSomeErrors() {
    String orcid = "0000-0000-0000-0003";
    when(sourceManager.retrieveSourceEntity()).thenReturn(new SourceEntity(new ClientDetailsEntity(CLIENT_2_ID)));
    //Lets send a bulk of 6 works
    WorkBulk bulk = new WorkBulk();
    //Work # 1 - Fine
    Work work1 = getWork(null);
    ExternalID extId = new ExternalID();
    extId.setRelationship(Relationship.SELF);
    extId.setType("doi");
    extId.setUrl(new Url("http://doi/1"));
    extId.setValue("doi-1");
    work1.getExternalIdentifiers().getExternalIdentifier().clear();
    work1.getExternalIdentifiers().getExternalIdentifier().add(extId);
    work1.getWorkTitle().getTitle().setContent("Work # 1");
    bulk.getBulk().add(work1);
    //Work # 2 - Fine
    Work work2 = getWork(null);
    work2.getWorkTitle().getTitle().setContent("Work # 2");
    bulk.getBulk().add(work2);
    //Work # 3 - Duplicated of Work # 1
    Work work3 = getWork(null);
    work3.getExternalIdentifiers().getExternalIdentifier().clear();
    work3.getExternalIdentifiers().getExternalIdentifier().add(extId);
    work3.getWorkTitle().getTitle().setContent("Work # 3");
    bulk.getBulk().add(work3);
    //Work # 4 - Fine
    Work work4 = getWork("new-ext-id-" + System.currentTimeMillis());
    work4.getWorkTitle().getTitle().setContent("Work # 4");
    bulk.getBulk().add(work4);
    //Work # 5 - Duplicated of existing work
    Work work5 = getWork(null);
    ExternalID dupExtId = new ExternalID();
    dupExtId.setRelationship(Relationship.SELF);
    dupExtId.setType("doi");
    dupExtId.setValue("1");
    work5.getExternalIdentifiers().getExternalIdentifier().clear();
    work5.getExternalIdentifiers().getExternalIdentifier().add(dupExtId);
    work5.getWorkTitle().getTitle().setContent("Work # 5");
    bulk.getBulk().add(work5);
    //Work # 6 - No title specified
    Work work6 = getWork(null);
    work6.getWorkTitle().getTitle().setContent(null);
    bulk.getBulk().add(work6);
    bulk = workManager.createWorks(orcid, bulk);
    assertNotNull(bulk);
    assertEquals(6, bulk.getBulk().size());
    List<Long> worksToDelete = new ArrayList<Long>();
    for (int i = 0; i < bulk.getBulk().size(); i++) {
        BulkElement element = bulk.getBulk().get(i);
        switch(i) {
            case 0:
            case 1:
            case 3:
                assertTrue(Work.class.isAssignableFrom(element.getClass()));
                Work work = (Work) element;
                assertNotNull(work);
                assertNotNull(work.getPutCode());
                if (i == 0) {
                    assertEquals("Work # 1", work.getWorkTitle().getTitle().getContent());
                } else if (i == 1) {
                    assertEquals("Work # 2", work.getWorkTitle().getTitle().getContent());
                } else {
                    assertEquals("Work # 4", work.getWorkTitle().getTitle().getContent());
                }
                worksToDelete.add(work.getPutCode());
                break;
            case 2:
            case 4:
            case 5:
                assertTrue("Error on id: " + i, OrcidError.class.isAssignableFrom(element.getClass()));
                OrcidError error = (OrcidError) element;
                if (i == 2) {
                    assertEquals(Integer.valueOf(9021), error.getErrorCode());
                } else if (i == 4) {
                    assertEquals(Integer.valueOf(9021), error.getErrorCode());
                } else {
                    assertEquals(Integer.valueOf(9022), error.getErrorCode());
                }
                break;
        }
    }
    //Delete new works
    for (Long putCode : worksToDelete) {
        assertTrue(workManager.checkSourceAndRemoveWork(orcid, putCode));
    }
}
Also used : ClientDetailsEntity(org.orcid.persistence.jpa.entities.ClientDetailsEntity) OrcidError(org.orcid.jaxb.model.error_v2.OrcidError) SourceEntity(org.orcid.persistence.jpa.entities.SourceEntity) WorkBulk(org.orcid.jaxb.model.record_v2.WorkBulk) ExternalID(org.orcid.jaxb.model.record_v2.ExternalID) ArrayList(java.util.ArrayList) Url(org.orcid.jaxb.model.common_v2.Url) BulkElement(org.orcid.jaxb.model.record_v2.BulkElement) Work(org.orcid.jaxb.model.record_v2.Work) Test(org.junit.Test) BaseTest(org.orcid.core.BaseTest)

Example 8 with BulkElement

use of org.orcid.jaxb.model.record_rc4.BulkElement in project ORCID-Source by ORCID.

the class WorksTest method testCreateBulkWithAllErrors.

@Test
public void testCreateBulkWithAllErrors() throws InterruptedException, JSONException {
    String accessToken = getAccessToken();
    WorkBulk bulk = createBulk(10, "existing-ext-id-" + System.currentTimeMillis());
    ClientResponse postResponse = memberV2_1ApiClient.createWorksJson(this.getUser1OrcidId(), bulk, accessToken);
    assertNotNull(postResponse);
    assertEquals(Response.Status.OK.getStatusCode(), postResponse.getStatus());
    bulk = postResponse.getEntity(WorkBulk.class);
    assertNotNull(bulk);
    assertNotNull(bulk.getBulk());
    boolean first = true;
    //All elements might be ok
    for (BulkElement element : bulk.getBulk()) {
        if (first) {
            assertTrue(Work.class.isAssignableFrom(element.getClass()));
            Work work = (Work) element;
            //Remove the work
            memberV2_1ApiClient.deleteWorkXml(this.getUser1OrcidId(), work.getPutCode(), accessToken);
            first = false;
        } else {
            assertTrue(OrcidError.class.isAssignableFrom(element.getClass()));
            OrcidError error = (OrcidError) element;
            assertEquals(Integer.valueOf(9021), error.getErrorCode());
        }
    }
}
Also used : ClientResponse(com.sun.jersey.api.client.ClientResponse) OrcidError(org.orcid.jaxb.model.error_v2.OrcidError) BulkElement(org.orcid.jaxb.model.record_v2.BulkElement) WorkBulk(org.orcid.jaxb.model.record_v2.WorkBulk) Work(org.orcid.jaxb.model.record_v2.Work) Test(org.junit.Test)

Example 9 with BulkElement

use of org.orcid.jaxb.model.record_rc4.BulkElement in project ORCID-Source by ORCID.

the class WorkManagerTest method testCreateWorksWithBulkAllErrors.

@Test
public void testCreateWorksWithBulkAllErrors() {
    String orcid = "0000-0000-0000-0003";
    when(sourceManager.retrieveSourceEntity()).thenReturn(new SourceEntity(new ClientDetailsEntity(CLIENT_1_ID)));
    //Set up data: 
    //Create one work with a DOI doi-1 so we can create a duplicate
    Work work = new Work();
    WorkTitle workTitle = new WorkTitle();
    workTitle.setTitle(new Title("work #1"));
    work.setWorkTitle(workTitle);
    ExternalIDs extIds = new ExternalIDs();
    ExternalID extId = new ExternalID();
    extId.setRelationship(Relationship.SELF);
    extId.setType("doi");
    extId.setUrl(new Url("http://doi/1"));
    extId.setValue("doi-1");
    extIds.getExternalIdentifier().add(extId);
    work.setWorkExternalIdentifiers(extIds);
    work.setWorkType(WorkType.BOOK);
    Work newWork = workManager.createWork(orcid, work, true);
    Long putCode = newWork.getPutCode();
    WorkBulk bulk = new WorkBulk();
    //Work # 1: No ext ids
    Work work1 = getWork("work # 1 " + System.currentTimeMillis());
    work1.getExternalIdentifiers().getExternalIdentifier().clear();
    //Work # 2: No title
    Work work2 = getWork("work # 2 " + System.currentTimeMillis());
    work2.getWorkTitle().getTitle().setContent(null);
    //Work # 3: No work type
    Work work3 = getWork("work # 3 " + System.currentTimeMillis());
    work3.setWorkType(null);
    //Work # 4: Ext id already exists
    Work work4 = getWork("work # 4 " + System.currentTimeMillis());
    work4.getExternalIdentifiers().getExternalIdentifier().add(extId);
    bulk.getBulk().add(work1);
    bulk.getBulk().add(work2);
    bulk.getBulk().add(work3);
    bulk.getBulk().add(work4);
    bulk = workManager.createWorks(orcid, bulk);
    assertNotNull(bulk);
    assertEquals(4, bulk.getBulk().size());
    for (int i = 0; i < bulk.getBulk().size(); i++) {
        BulkElement element = bulk.getBulk().get(i);
        assertTrue(OrcidError.class.isAssignableFrom(element.getClass()));
        OrcidError error = (OrcidError) element;
        switch(i) {
            case 0:
                assertEquals(Integer.valueOf(9023), error.getErrorCode());
                break;
            case 1:
                assertEquals(Integer.valueOf(9022), error.getErrorCode());
                break;
            case 2:
                assertEquals(Integer.valueOf(9037), error.getErrorCode());
                break;
            case 3:
                assertEquals(Integer.valueOf(9021), error.getErrorCode());
                break;
        }
    }
    //Delete the work
    assertTrue(workManager.checkSourceAndRemoveWork(orcid, putCode));
}
Also used : ClientDetailsEntity(org.orcid.persistence.jpa.entities.ClientDetailsEntity) OrcidError(org.orcid.jaxb.model.error_v2.OrcidError) ExternalIDs(org.orcid.jaxb.model.record_v2.ExternalIDs) SourceEntity(org.orcid.persistence.jpa.entities.SourceEntity) WorkBulk(org.orcid.jaxb.model.record_v2.WorkBulk) ExternalID(org.orcid.jaxb.model.record_v2.ExternalID) WorkTitle(org.orcid.jaxb.model.record_v2.WorkTitle) Title(org.orcid.jaxb.model.common_v2.Title) Url(org.orcid.jaxb.model.common_v2.Url) WorkTitle(org.orcid.jaxb.model.record_v2.WorkTitle) BulkElement(org.orcid.jaxb.model.record_v2.BulkElement) Work(org.orcid.jaxb.model.record_v2.Work) Test(org.junit.Test) BaseTest(org.orcid.core.BaseTest)

Example 10 with BulkElement

use of org.orcid.jaxb.model.record_rc4.BulkElement in project ORCID-Source by ORCID.

the class MemberV2ApiServiceDelegatorImpl method createWorks.

@Override
public Response createWorks(String orcid, WorkBulk works) {
    orcidSecurityManager.checkClientAccessAndScopes(orcid, ScopePathType.ORCID_WORKS_CREATE);
    if (works != null) {
        for (BulkElement b : works.getBulk()) {
            if (Work.class.isAssignableFrom(b.getClass())) {
                clearSource((Work) b);
            }
        }
    }
    works = workManager.createWorks(orcid, works);
    sourceUtils.setSourceName(works);
    return Response.ok(works).build();
}
Also used : BulkElement(org.orcid.jaxb.model.record_v2.BulkElement)

Aggregations

Test (org.junit.Test)14 BulkElement (org.orcid.jaxb.model.record_v2.BulkElement)13 ClientResponse (com.sun.jersey.api.client.ClientResponse)12 OrcidError (org.orcid.jaxb.model.error_v2.OrcidError)9 Work (org.orcid.jaxb.model.record_v2.Work)9 WorkBulk (org.orcid.jaxb.model.record_v2.WorkBulk)9 ArrayList (java.util.ArrayList)4 BulkElement (org.orcid.jaxb.model.record_rc3.BulkElement)3 Work (org.orcid.jaxb.model.record_rc3.Work)3 WorkBulk (org.orcid.jaxb.model.record_rc3.WorkBulk)3 BulkElement (org.orcid.jaxb.model.record_rc4.BulkElement)3 Work (org.orcid.jaxb.model.record_rc4.Work)3 WorkBulk (org.orcid.jaxb.model.record_rc4.WorkBulk)3 ExternalID (org.orcid.jaxb.model.record_v2.ExternalID)3 SourceEntity (org.orcid.persistence.jpa.entities.SourceEntity)3 BaseTest (org.orcid.core.BaseTest)2 Url (org.orcid.jaxb.model.common_v2.Url)2 OrcidError (org.orcid.jaxb.model.error_rc3.OrcidError)2 OrcidError (org.orcid.jaxb.model.error_rc4.OrcidError)2 ClientDetailsEntity (org.orcid.persistence.jpa.entities.ClientDetailsEntity)2