Examples with GroupableActivity org.orcid.jaxb.model.record_v2.GroupableActivity used on opensource projects

Example 6 with GroupableActivity

use of org.orcid.jaxb.model.record_v2.GroupableActivity in project ORCID-Source by ORCID.

the class OrcidSecurityManagerImpl method filterExternalIdentifiers.

/**
     * Filter the group external identifiers to match the external identifiers
     * that belongs to the activities it have after filtering
     * 
     * @param group
     *            The group we want to filter the external identifiers
     */
private void filterExternalIdentifiers(Group group) {
    // Iterate over every external identifier and check if it is still
    // present in the list of filtered elements
    ExternalIDs extIds = group.getIdentifiers();
    Iterator<ExternalID> extIdsIt = extIds.getExternalIdentifier().iterator();
    while (extIdsIt.hasNext()) {
        ExternalID extId = extIdsIt.next();
        boolean found = false;
        for (GroupableActivity summary : group.getActivities()) {
            if (summary.getExternalIdentifiers() != null) {
                if (summary.getExternalIdentifiers().getExternalIdentifier().contains(extId)) {
                    found = true;
                    break;
                }
            }
        }
        // If the ext id is not found, remove it from the list of ext ids
        if (!found) {
            extIdsIt.remove();
        }
    }
}

Example 7 with GroupableActivity

use of org.orcid.jaxb.model.record_v2.GroupableActivity in project ORCID-Source by ORCID.

the class ActivitiesGroup method merge.

public void merge(ActivitiesGroup group) {
    Set<GroupableActivity> otherActivities = group.getActivities();
    Set<GroupAble> otherKeys = group.getGroupKeys();
    //The incoming groups should always contain at least one key, we should not merge activities without keys
    if (otherKeys.isEmpty())
        throw new IllegalArgumentException("Unable to merge a group without external identifiers");
    //Merge group keys
    for (GroupAble otherKey : otherKeys) {
        if (!groupKeys.contains(otherKey))
            groupKeys.add(otherKey);
    }
    //Merge activities
    for (GroupableActivity activity : otherActivities) {
        //We assume the activity is not already there, anyway it is a set
        activities.add(activity);
    }
}

Example 8 with GroupableActivity

use of org.orcid.jaxb.model.record_v2.GroupableActivity in project ORCID-Source by ORCID.

the class Api2_0_LastModifiedDatesHelper method calculateLastModified.

public static void calculateLastModified(Group group) {
    Collection<? extends GroupableActivity> activities = group.getActivities();
    if (activities != null && !activities.isEmpty()) {
        Iterator<? extends GroupableActivity> activitiesIterator = activities.iterator();
        LastModifiedDate latest = null;
        while (activitiesIterator.hasNext()) {
            GroupableActivity activity = activitiesIterator.next();
            if (activity.getLastModifiedDate() != null && activity.getLastModifiedDate().after(latest)) {
                latest = activity.getLastModifiedDate();
            }
        }
        group.setLastModifiedDate(latest);
    }
}

Example 9 with GroupableActivity

use of org.orcid.jaxb.model.record_v2.GroupableActivity in project ORCID-Source by ORCID.

the class ActivitiesGroup method belongsToGroup.

@Deprecated
public /** This method is only used by tests to confirm accuracy of ActivitiesGroupGenerator and should not be used in production
     * 
     * @param activity
     * @return
     */
boolean belongsToGroup(GroupableActivity activity) {
    boolean isPeerReview = PeerReviewSummary.class.isAssignableFrom(activity.getClass());
    //If there are no grouping keys
    if (groupKeys == null || groupKeys.isEmpty()) {
        if (isPeerReview) {
            return false;
        } else {
            if (activity.getExternalIdentifiers() == null || activity.getExternalIdentifiers().getExternalIdentifier() == null || activity.getExternalIdentifiers().getExternalIdentifier().isEmpty()) {
                //If the activity doesn't have any external identifier, check if the activity is in the group
                if (activities.contains(activity))
                    return true;
                else
                    return false;
            } else {
                //If any of the activities pass the grouping validation, the activity must belong to other group
                for (GroupAble extId : activity.getExternalIdentifiers().getExternalIdentifier()) {
                    if (extId.isGroupAble())
                        return false;
                }
                //If none of the activities pass the groupings validation, so, lets check if the group actually contains the activity
                if (activities.contains(activity))
                    return true;
                else
                    return false;
            }
        }
    }
    if (isPeerReview) {
        PeerReviewSummary peerReviewSummary = (PeerReviewSummary) activity;
        PeerReviewGroupKey prgk = new PeerReviewGroupKey();
        prgk.setGroupId(peerReviewSummary.getGroupId());
        if (prgk.isGroupAble()) {
            if (groupKeys.contains(prgk)) {
                return true;
            }
        }
    } else {
        //Check existing keys
        ExternalIdentifiersContainer container = activity.getExternalIdentifiers();
        if (container != null) {
            List<? extends GroupAble> extIds = (List<? extends GroupAble>) container.getExternalIdentifier();
            for (GroupAble extId : extIds) {
                //First check keys restrictions
                if (extId.isGroupAble()) {
                    //If any of the keys already exists on this group, return true
                    if (containsKey(extId))
                        return true;
                }
            }
        }
    }
    return false;
}

Example 10 with GroupableActivity

use of org.orcid.jaxb.model.record_v2.GroupableActivity in project ORCID-Source by ORCID.

the class ActivitiesGroupGenerator method group.

public void group(GroupableActivity activity) {
    if (groups.isEmpty()) {
        //If it is the first activity, create a new group for it
        ActivitiesGroup newGroup = new ActivitiesGroup(activity);
        groups.add(newGroup);
        for (GroupAble g : newGroup.getGroupKeys()) {
            lookup.put(g, newGroup);
        }
    } else {
        //If it is not the first activity, check which groups it belongs to
        List<ActivitiesGroup> belongsTo = new ArrayList<ActivitiesGroup>();
        ActivitiesGroup thisGroup = new ActivitiesGroup(activity);
        for (GroupAble g : thisGroup.getGroupKeys()) {
            if (lookup.containsKey(g))
                belongsTo.add(lookup.get(g));
        }
        //If it doesnt belong to any group, create a new group for it
        if (belongsTo.isEmpty()) {
            ActivitiesGroup newGroup = new ActivitiesGroup(activity);
            groups.add(newGroup);
            for (GroupAble g : newGroup.getGroupKeys()) {
                lookup.put(g, newGroup);
            }
        } else {
            //Get the first group it belongs to
            ActivitiesGroup firstGroup = belongsTo.get(0);
            firstGroup.add(activity);
            //If it belongs to other groups, merge them into the first one
            if (belongsTo.size() > 1) {
                for (int i = 1; i < belongsTo.size(); i++) {
                    //Merge the group
                    if (firstGroup != belongsTo.get(i)) {
                        firstGroup.merge(belongsTo.get(i));
                        //Remove it from the list of groups
                        groups.remove(belongsTo.get(i));
                    }
                }
            }
            for (GroupAble g : thisGroup.getGroupKeys()) {
                lookup.put(g, firstGroup);
            }
        }
    }
//TODO: make sure this orders correctly
//TODO: look at v1.2 post/put work....
}