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Example 21 with Keywords

use of org.orcid.jaxb.model.record_v2.Keywords in project ORCID-Source by ORCID.

the class OrcidRecordToSolrDocument method convert.

public OrcidSolrDocument convert(Record record, List<Funding> fundings) {
    OrcidSolrDocument profileIndexDocument = new OrcidSolrDocument();
    profileIndexDocument.setOrcid(record.getOrcidIdentifier().getPath());
    if (record.getHistory() != null) {
        if (record.getHistory().getLastModifiedDate() != null) {
            profileIndexDocument.setProfileLastModifiedDate(record.getHistory().getLastModifiedDate().getValue().toGregorianCalendar().getTime());
        }
        if (record.getHistory().getSubmissionDate() != null) {
            profileIndexDocument.setProfileSubmissionDate(record.getHistory().getSubmissionDate().getValue().toGregorianCalendar().getTime());
        }
    }
    if (record.getDeprecated() != null) {
        profileIndexDocument.setPrimaryRecord(record.getDeprecated().getPrimaryRecord() != null ? record.getDeprecated().getPrimaryRecord().getOrcidIdentifier().getPath() : null);
    }
    if (record.getPerson() != null) {
        if (record.getPerson().getName() != null) {
            profileIndexDocument.setFamilyName(record.getPerson().getName().getFamilyName() != null ? record.getPerson().getName().getFamilyName().getContent() : null);
            profileIndexDocument.setGivenNames(record.getPerson().getName().getGivenNames() != null ? record.getPerson().getName().getGivenNames().getContent() : null);
            profileIndexDocument.setCreditName(record.getPerson().getName().getCreditName() != null ? record.getPerson().getName().getCreditName().getContent() : null);
        }
        if (record.getPerson().getOtherNames() != null) {
            if (record.getPerson().getOtherNames().getOtherNames() != null && !record.getPerson().getOtherNames().getOtherNames().isEmpty()) {
                List<String> names = new ArrayList<String>();
                for (org.orcid.jaxb.model.record_v2.OtherName on : record.getPerson().getOtherNames().getOtherNames()) {
                    names.add(on.getContent());
                }
                profileIndexDocument.setOtherNames(names);
            }
        }
        if (record.getPerson().getEmails() != null && record.getPerson().getEmails().getEmails() != null) {
            for (org.orcid.jaxb.model.record_v2.Email e : record.getPerson().getEmails().getEmails()) {
                profileIndexDocument.addEmailAddress(e.getEmail());
            }
        }
        //weird, the type is not indexed...!
        if (record.getPerson().getExternalIdentifiers() != null && record.getPerson().getExternalIdentifiers().getExternalIdentifiers() != null) {
            List<String> extIdOrcids = new ArrayList<String>();
            List<String> extIdRefs = new ArrayList<String>();
            List<String> extIdOrcidsAndRefs = new ArrayList<String>();
            for (PersonExternalIdentifier externalIdentifier : record.getPerson().getExternalIdentifiers().getExternalIdentifiers()) {
                String sourcePath = null;
                if (externalIdentifier.getSource() != null && externalIdentifier.getSource().retrieveSourcePath() != null) {
                    sourcePath = externalIdentifier.getSource().retrieveSourcePath();
                    extIdOrcids.add(sourcePath);
                }
                if (externalIdentifier.getValue() != null) {
                    //weird, the type is not indexed...!
                    extIdRefs.add(externalIdentifier.getValue());
                }
                if (NullUtils.noneNull(sourcePath, externalIdentifier.getValue())) {
                    extIdOrcidsAndRefs.add(sourcePath + "=" + externalIdentifier.getValue());
                }
            }
            if (!extIdOrcids.isEmpty()) {
                profileIndexDocument.setExternalIdSources(extIdOrcids);
            }
            if (!extIdRefs.isEmpty()) {
                profileIndexDocument.setExternalIdReferences(extIdRefs);
            }
            if (!extIdOrcidsAndRefs.isEmpty()) {
                profileIndexDocument.setExternalIdSourcesAndReferences(extIdOrcidsAndRefs);
            }
        }
        //weird, we only index keywords if activities exist...!
        if (record.getActivitiesSummary() != null) {
            if (record.getPerson().getKeywords() != null && record.getPerson().getKeywords().getKeywords() != null) {
                List<String> keywordValues = new ArrayList<String>();
                for (org.orcid.jaxb.model.record_v2.Keyword keyword : record.getPerson().getKeywords().getKeywords()) {
                    keywordValues.add(keyword.getContent());
                }
                profileIndexDocument.setKeywords(keywordValues);
            }
        }
        if (record.getActivitiesSummary() != null && record.getActivitiesSummary().getWorks() != null && record.getActivitiesSummary().getWorks().getWorkGroup() != null) {
            //work ids
            Map<String, List<String>> allExternalIdentifiers = new HashMap<String, List<String>>();
            Map<String, List<String>> partOf = new HashMap<String, List<String>>();
            Map<String, List<String>> self = new HashMap<String, List<String>>();
            Set<String> workTitles = new HashSet<String>();
            for (WorkGroup wg : record.getActivitiesSummary().getWorks().getWorkGroup()) {
                if (wg.getWorkSummary() != null) {
                    for (WorkSummary w : wg.getWorkSummary()) {
                        // have to use summaries here as group does not include part-of
                        if (w.getExternalIdentifiers() != null && w.getExternalIdentifiers().getExternalIdentifier() != null) {
                            for (ExternalID id : w.getExternalIdentifiers().getExternalIdentifier()) {
                                //old way
                                if (!allExternalIdentifiers.containsKey(id.getType())) {
                                    allExternalIdentifiers.put(id.getType(), new ArrayList<String>());
                                }
                                if (!allExternalIdentifiers.get(id.getType()).contains(id.getValue())) {
                                    allExternalIdentifiers.get(id.getType()).add(id.getValue());
                                }
                                //new way
                                if (Relationship.SELF.equals(id.getRelationship())) {
                                    if (!self.containsKey(id.getType() + SolrConstants.DYNAMIC_SELF)) {
                                        self.put(id.getType() + SolrConstants.DYNAMIC_SELF, new ArrayList<String>());
                                    }
                                    if (!self.get(id.getType() + SolrConstants.DYNAMIC_SELF).contains(id.getValue())) {
                                        self.get(id.getType() + SolrConstants.DYNAMIC_SELF).add(id.getValue());
                                    }
                                }
                                if (Relationship.PART_OF.equals(id.getRelationship())) {
                                    if (!partOf.containsKey(id.getType() + SolrConstants.DYNAMIC_PART_OF)) {
                                        partOf.put(id.getType() + SolrConstants.DYNAMIC_PART_OF, new ArrayList<String>());
                                    }
                                    if (!partOf.get(id.getType() + SolrConstants.DYNAMIC_PART_OF).contains(id.getValue())) {
                                        partOf.get(id.getType() + SolrConstants.DYNAMIC_PART_OF).add(id.getValue());
                                    }
                                }
                            }
                        }
                        if (w.getTitle() != null) {
                            if (w.getTitle().getTitle() != null && StringUtils.isNotEmpty(w.getTitle().getTitle().getContent())) {
                                workTitles.add(w.getTitle().getTitle().getContent());
                            }
                            if (w.getTitle().getSubtitle() != null && StringUtils.isNotEmpty(w.getTitle().getSubtitle().getContent())) {
                                workTitles.add(w.getTitle().getSubtitle().getContent());
                            }
                            if (w.getTitle().getTranslatedTitle() != null && StringUtils.isNotEmpty(w.getTitle().getTranslatedTitle().getContent())) {
                                workTitles.add(w.getTitle().getTranslatedTitle().getContent());
                            }
                        }
                    }
                }
            }
            profileIndexDocument.setSelfIds(self);
            profileIndexDocument.setPartOfIds(partOf);
            //now add them to the doc, the old way
            addExternalIdentifiersToIndexDocument(profileIndexDocument, allExternalIdentifiers);
            profileIndexDocument.setWorkTitles(new ArrayList<String>(workTitles));
        }
        Map<String, List<String>> organisationIds = new HashMap<String, List<String>>();
        organisationIds.put(SolrConstants.FUNDREF_ORGANISATION_ID, new ArrayList<String>());
        organisationIds.put(SolrConstants.RINGGOLD_ORGANISATION_ID, new ArrayList<String>());
        Map<String, List<String>> organisationNames = new HashMap<String, List<String>>();
        organisationNames.put(SolrConstants.AFFILIATION_ORGANISATION_NAME, new ArrayList<String>());
        organisationNames.put(SolrConstants.FUNDING_ORGANISATION_NAME, new ArrayList<String>());
        if (!fundings.isEmpty()) {
            Set<String> fundingTitle = new HashSet<String>();
            Set<String> fundingGrantNumbers = new HashSet<String>();
            for (Funding f : fundings) {
                if (f.getTitle() != null) {
                    if (f.getTitle().getTitle() != null && StringUtils.isNotEmpty(f.getTitle().getTitle().getContent())) {
                        fundingTitle.add(f.getTitle().getTitle().getContent());
                    }
                    if (f.getTitle().getTranslatedTitle() != null && StringUtils.isNotEmpty(f.getTitle().getTranslatedTitle().getContent())) {
                        fundingTitle.add(f.getTitle().getTranslatedTitle().getContent());
                    }
                }
                if (f.getExternalIdentifiers() != null && f.getExternalIdentifiers().getExternalIdentifier() != null) {
                    for (ExternalID id : f.getExternalIdentifiers().getExternalIdentifier()) {
                        if (id.getType().equals("grant_number")) {
                            fundingGrantNumbers.add(id.getValue());
                        }
                    }
                }
                if (f.getOrganization() != null) {
                    organisationNames.get(SolrConstants.FUNDING_ORGANISATION_NAME).add(f.getOrganization().getName());
                    if (f.getOrganization().getDisambiguatedOrganization() != null)
                        organisationIds.get(SolrConstants.FUNDREF_ORGANISATION_ID).add(f.getOrganization().getDisambiguatedOrganization().getDisambiguatedOrganizationIdentifier());
                }
            }
            profileIndexDocument.setFundingTitles(new ArrayList<String>(fundingTitle));
            profileIndexDocument.setGrantNumbers(new ArrayList<String>(fundingGrantNumbers));
        }
        //now do affiliations
        if (record.getActivitiesSummary() != null && record.getActivitiesSummary().getEducations() != null && record.getActivitiesSummary().getEducations().getSummaries() != null) {
            for (EducationSummary e : record.getActivitiesSummary().getEducations().getSummaries()) {
                if (e.getOrganization() != null) {
                    organisationNames.get(SolrConstants.AFFILIATION_ORGANISATION_NAME).add(e.getOrganization().getName());
                    if (e.getOrganization().getDisambiguatedOrganization() != null)
                        organisationIds.get(SolrConstants.RINGGOLD_ORGANISATION_ID).add(e.getOrganization().getDisambiguatedOrganization().getDisambiguatedOrganizationIdentifier());
                }
            }
        }
        if (record.getActivitiesSummary() != null && record.getActivitiesSummary().getEmployments() != null && record.getActivitiesSummary().getEmployments().getSummaries() != null) {
            for (EmploymentSummary e : record.getActivitiesSummary().getEmployments().getSummaries()) {
                if (e.getOrganization() != null) {
                    organisationNames.get(SolrConstants.AFFILIATION_ORGANISATION_NAME).add(e.getOrganization().getName());
                    if (e.getOrganization().getDisambiguatedOrganization() != null)
                        organisationIds.get(SolrConstants.RINGGOLD_ORGANISATION_ID).add(e.getOrganization().getDisambiguatedOrganization().getDisambiguatedOrganizationIdentifier());
                }
            }
        }
        profileIndexDocument.setOrganisationIds(organisationIds);
        profileIndexDocument.setOrganisationNames(organisationNames);
    }
    if (indexProfile) {
        try {
            StringWriter sw = new StringWriter();
            jaxbContext_2_0_api.createMarshaller().marshal(record, sw);
            profileIndexDocument.setPublicProfileMessage(sw.getBuffer().toString());
        } catch (JAXBException e) {
            LOG.error("problem marshalling xml", e);
        }
    }
    LOG.debug(profileIndexDocument.toString());
    return profileIndexDocument;
}
Also used : HashMap(java.util.HashMap) Funding(org.orcid.jaxb.model.record_v2.Funding) ExternalID(org.orcid.jaxb.model.record_v2.ExternalID) ArrayList(java.util.ArrayList) WorkGroup(org.orcid.jaxb.model.record.summary_v2.WorkGroup) WorkSummary(org.orcid.jaxb.model.record.summary_v2.WorkSummary) StringWriter(java.io.StringWriter) OrcidSolrDocument(org.orcid.utils.solr.entities.OrcidSolrDocument) ArrayList(java.util.ArrayList) List(java.util.List) HashSet(java.util.HashSet) JAXBException(javax.xml.bind.JAXBException) PersonExternalIdentifier(org.orcid.jaxb.model.record_v2.PersonExternalIdentifier) EducationSummary(org.orcid.jaxb.model.record.summary_v2.EducationSummary) EmploymentSummary(org.orcid.jaxb.model.record.summary_v2.EmploymentSummary)

Example 22 with Keywords

use of org.orcid.jaxb.model.record_v2.Keywords in project ORCID-Source by ORCID.

the class ValidateV2SamplesTest method unmarshallFromPath.

private Object unmarshallFromPath(String path, Class<?> type, String schemaPath) throws SAXException, URISyntaxException {
    try (Reader reader = new InputStreamReader(getClass().getResourceAsStream(path))) {
        Object obj = unmarshall(reader, type, schemaPath);
        Object result = null;
        if (ResearcherUrls.class.equals(type)) {
            result = (ResearcherUrls) obj;
        } else if (ResearcherUrl.class.equals(type)) {
            result = (ResearcherUrl) obj;
        } else if (PersonalDetails.class.equals(type)) {
            result = (PersonalDetails) obj;
        } else if (PersonExternalIdentifier.class.equals(type)) {
            result = (PersonExternalIdentifier) obj;
        } else if (PersonExternalIdentifiers.class.equals(type)) {
            result = (PersonExternalIdentifiers) obj;
        } else if (Biography.class.equals(type)) {
            result = (Biography) obj;
        } else if (Name.class.equals(type)) {
            result = (Name) obj;
        } else if (CreditName.class.equals(type)) {
            result = (CreditName) obj;
        } else if (OtherName.class.equals(type)) {
            result = (OtherName) obj;
        } else if (OtherNames.class.equals(type)) {
            result = (OtherNames) obj;
        } else if (Keywords.class.equals(type)) {
            result = (Keywords) obj;
        } else if (Keyword.class.equals(type)) {
            result = (Keyword) obj;
        } else if (Addresses.class.equals(type)) {
            result = (Addresses) obj;
        } else if (Address.class.equals(type)) {
            result = (Address) obj;
        } else if (Emails.class.equals(type)) {
            result = (Emails) obj;
        } else if (Email.class.equals(type)) {
            result = (Email) obj;
        } else if (Person.class.equals(type)) {
            result = (Person) obj;
        } else if (Deprecated.class.equals(type)) {
            result = (Deprecated) obj;
        } else if (Preferences.class.equals(type)) {
            result = (Preferences) obj;
        } else if (History.class.equals(type)) {
            result = (History) obj;
        } else if (Record.class.equals(type)) {
            result = (Record) obj;
        } else if (ActivitiesSummary.class.equals(type)) {
            result = (ActivitiesSummary) obj;
        } else if (Works.class.equals(type)) {
            result = (Works) obj;
        }
        return result;
    } catch (IOException e) {
        throw new RuntimeException("Error reading notification from classpath", e);
    }
}
Also used : Email(org.orcid.jaxb.model.record_v2.Email) InputStreamReader(java.io.InputStreamReader) Keyword(org.orcid.jaxb.model.record_v2.Keyword) Address(org.orcid.jaxb.model.record_v2.Address) OtherNames(org.orcid.jaxb.model.record_v2.OtherNames) CreditName(org.orcid.jaxb.model.record_v2.CreditName) Reader(java.io.Reader) InputStreamReader(java.io.InputStreamReader) IOException(java.io.IOException) PersonExternalIdentifier(org.orcid.jaxb.model.record_v2.PersonExternalIdentifier) History(org.orcid.jaxb.model.record_v2.History) ActivitiesSummary(org.orcid.jaxb.model.record.summary_v2.ActivitiesSummary) Deprecated(org.orcid.jaxb.model.record_v2.Deprecated) Biography(org.orcid.jaxb.model.record_v2.Biography) ResearcherUrl(org.orcid.jaxb.model.record_v2.ResearcherUrl)

Example 23 with Keywords

use of org.orcid.jaxb.model.record_v2.Keywords in project ORCID-Source by ORCID.

the class ValidateV2SamplesTest method testMarshallKeyword.

@Test
public void testMarshallKeyword() throws JAXBException, SAXException, URISyntaxException {
    Keywords object = (Keywords) unmarshallFromPath("/record_2.0/samples/read_samples/keywords-2.0.xml", Keywords.class);
    marshall(object, "/record_2.0/keyword-2.0.xsd");
}
Also used : Keywords(org.orcid.jaxb.model.record_v2.Keywords) Test(org.junit.Test)

Example 24 with Keywords

use of org.orcid.jaxb.model.record_v2.Keywords in project ORCID-Source by ORCID.

the class PublicV2ApiServiceDelegatorImpl method viewKeywords.

@Override
public Response viewKeywords(String orcid) {
    long lastModifiedTime = getLastModifiedTime(orcid);
    Keywords keywords = profileKeywordManagerReadOnly.getPublicKeywords(orcid, lastModifiedTime);
    publicAPISecurityManagerV2.filter(keywords);
    ElementUtils.setPathToKeywords(keywords, orcid);
    Api2_0_LastModifiedDatesHelper.calculateLastModified(keywords);
    sourceUtilsReadOnly.setSourceName(keywords);
    return Response.ok(keywords).build();
}
Also used : Keywords(org.orcid.jaxb.model.record_v2.Keywords)

Example 25 with Keywords

use of org.orcid.jaxb.model.record_v2.Keywords in project ORCID-Source by ORCID.

the class OrcidInfo method publicPreview.

@RequestMapping(value = { "/{orcid:(?:\\d{4}-){3,}\\d{3}[\\dX]}", "/{orcid:(?:\\d{4}-){3,}\\d{3}[\\dX]}/print" })
public ModelAndView publicPreview(HttpServletRequest request, @RequestParam(value = "page", defaultValue = "1") int pageNo, @RequestParam(value = "v", defaultValue = "0") int v, @RequestParam(value = "maxResults", defaultValue = "15") int maxResults, @PathVariable("orcid") String orcid) {
    ProfileEntity profile = null;
    try {
        profile = profileEntityCacheManager.retrieve(orcid);
    } catch (Exception e) {
        return new ModelAndView("error-404");
    }
    try {
        // Check if the profile is deprecated, non claimed or locked
        orcidSecurityManager.checkProfile(orcid);
    } catch (OrcidDeprecatedException | OrcidNotClaimedException | LockedException e) {
        ModelAndView mav = new ModelAndView("public_profile_unavailable");
        mav.addObject("effectiveUserOrcid", orcid);
        String displayName = "";
        if (e instanceof OrcidDeprecatedException) {
            PersonalDetails publicPersonalDetails = personalDetailsManager.getPublicPersonalDetails(orcid);
            if (publicPersonalDetails.getName() != null) {
                Name name = publicPersonalDetails.getName();
                if (name.getVisibility().equals(org.orcid.jaxb.model.common_v2.Visibility.PUBLIC)) {
                    if (name.getCreditName() != null && !PojoUtil.isEmpty(name.getCreditName().getContent())) {
                        displayName = name.getCreditName().getContent();
                    } else {
                        if (name.getGivenNames() != null && !PojoUtil.isEmpty(name.getGivenNames().getContent())) {
                            displayName = name.getGivenNames().getContent() + " ";
                        }
                        if (name.getFamilyName() != null && !PojoUtil.isEmpty(name.getFamilyName().getContent())) {
                            displayName += name.getFamilyName().getContent();
                        }
                    }
                }
            }
            mav.addObject("deprecated", true);
            mav.addObject("primaryRecord", profile.getPrimaryRecord().getId());
        } else if (e instanceof OrcidNotClaimedException) {
            displayName = localeManager.resolveMessage("orcid.reserved_for_claim");
        } else {
            mav.addObject("locked", true);
            mav.addObject("isPublicProfile", true);
            displayName = localeManager.resolveMessage("public_profile.deactivated.given_names") + " " + localeManager.resolveMessage("public_profile.deactivated.family_name");
        }
        if (!PojoUtil.isEmpty(displayName)) {
            mav.addObject("title", getMessage("layout.public-layout.title", displayName, orcid));
            mav.addObject("displayName", displayName);
        }
        return mav;
    }
    long lastModifiedTime = getLastModifiedTime(orcid);
    ModelAndView mav = null;
    if (request.getRequestURI().contains("/print")) {
        mav = new ModelAndView("print_public_record");
        mav.addObject("hideUserVoiceScript", true);
    } else {
        mav = new ModelAndView("public_profile_v3");
    }
    mav.addObject("isPublicProfile", true);
    mav.addObject("effectiveUserOrcid", orcid);
    mav.addObject("lastModifiedTime", lastModifiedTime);
    boolean isProfileEmtpy = true;
    HttpSession session = request.getSession(false);
    if (session != null) {
        session.removeAttribute(PUBLIC_WORKS_RESULTS_ATTRIBUTE);
    }
    PersonalDetails publicPersonalDetails = personalDetailsManager.getPublicPersonalDetails(orcid);
    // Fill personal details
    if (publicPersonalDetails != null) {
        // Get display name
        String displayName = "";
        if (publicPersonalDetails.getName() != null) {
            Name name = publicPersonalDetails.getName();
            if (name.getVisibility().equals(org.orcid.jaxb.model.common_v2.Visibility.PUBLIC)) {
                if (name.getCreditName() != null && !PojoUtil.isEmpty(name.getCreditName().getContent())) {
                    displayName = name.getCreditName().getContent();
                } else {
                    if (name.getGivenNames() != null && !PojoUtil.isEmpty(name.getGivenNames().getContent())) {
                        displayName = name.getGivenNames().getContent() + " ";
                    }
                    if (name.getFamilyName() != null && !PojoUtil.isEmpty(name.getFamilyName().getContent())) {
                        displayName += name.getFamilyName().getContent();
                    }
                }
            }
        }
        if (!PojoUtil.isEmpty(displayName)) {
            // <Published Name> (<ORCID iD>) - ORCID | Connecting Research
            // and Researchers
            mav.addObject("title", getMessage("layout.public-layout.title", displayName.trim(), orcid));
            mav.addObject("displayName", displayName);
        }
        // Get biography
        if (publicPersonalDetails.getBiography() != null) {
            Biography bio = publicPersonalDetails.getBiography();
            if (org.orcid.jaxb.model.common_v2.Visibility.PUBLIC.equals(bio.getVisibility()) && !PojoUtil.isEmpty(bio.getContent())) {
                isProfileEmtpy = false;
                mav.addObject("biography", bio);
            }
        }
        // Fill other names
        OtherNames publicOtherNames = publicPersonalDetails.getOtherNames();
        if (publicOtherNames != null && publicOtherNames.getOtherNames() != null) {
            Iterator<OtherName> it = publicOtherNames.getOtherNames().iterator();
            while (it.hasNext()) {
                OtherName otherName = it.next();
                if (!org.orcid.jaxb.model.common_v2.Visibility.PUBLIC.equals(otherName.getVisibility())) {
                    it.remove();
                }
            }
        }
        Map<String, List<OtherName>> groupedOtherNames = groupOtherNames(publicOtherNames);
        mav.addObject("publicGroupedOtherNames", groupedOtherNames);
    }
    // Fill biography elements
    // Fill country
    Addresses publicAddresses = addressManager.getPublicAddresses(orcid, lastModifiedTime);
    Map<String, String> countryNames = new HashMap<String, String>();
    if (publicAddresses != null && publicAddresses.getAddress() != null) {
        Address publicAddress = null;
        // The primary address will be the one with the lowest display index
        for (Address address : publicAddresses.getAddress()) {
            countryNames.put(address.getCountry().getValue().value(), getcountryName(address.getCountry().getValue().value()));
            if (publicAddress == null) {
                publicAddress = address;
            }
        }
        if (publicAddress != null) {
            mav.addObject("publicAddress", publicAddress);
            mav.addObject("countryNames", countryNames);
            Map<String, List<Address>> groupedAddresses = groupAddresses(publicAddresses);
            mav.addObject("publicGroupedAddresses", groupedAddresses);
        }
    }
    // Fill keywords
    Keywords publicKeywords = keywordManager.getPublicKeywords(orcid, lastModifiedTime);
    Map<String, List<Keyword>> groupedKeywords = groupKeywords(publicKeywords);
    mav.addObject("publicGroupedKeywords", groupedKeywords);
    // Fill researcher urls
    ResearcherUrls publicResearcherUrls = researcherUrlManager.getPublicResearcherUrls(orcid, lastModifiedTime);
    Map<String, List<ResearcherUrl>> groupedResearcherUrls = groupResearcherUrls(publicResearcherUrls);
    mav.addObject("publicGroupedResearcherUrls", groupedResearcherUrls);
    // Fill emails
    Emails publicEmails = emailManager.getPublicEmails(orcid, lastModifiedTime);
    Map<String, List<Email>> groupedEmails = groupEmails(publicEmails);
    mav.addObject("publicGroupedEmails", groupedEmails);
    // Fill external identifiers
    PersonExternalIdentifiers publicPersonExternalIdentifiers = externalIdentifierManager.getPublicExternalIdentifiers(orcid, lastModifiedTime);
    Map<String, List<PersonExternalIdentifier>> groupedExternalIdentifiers = groupExternalIdentifiers(publicPersonExternalIdentifiers);
    mav.addObject("publicGroupedPersonExternalIdentifiers", groupedExternalIdentifiers);
    LinkedHashMap<Long, WorkForm> minimizedWorksMap = new LinkedHashMap<>();
    LinkedHashMap<Long, Affiliation> affiliationMap = new LinkedHashMap<>();
    LinkedHashMap<Long, Funding> fundingMap = new LinkedHashMap<>();
    LinkedHashMap<Long, PeerReview> peerReviewMap = new LinkedHashMap<>();
    minimizedWorksMap = activityCacheManager.pubMinWorksMap(orcid, lastModifiedTime);
    if (minimizedWorksMap.size() > 0) {
        isProfileEmtpy = false;
    } else {
        mav.addObject("worksEmpty", true);
    }
    affiliationMap = affiliationMap(orcid, lastModifiedTime);
    if (affiliationMap.size() > 0) {
        isProfileEmtpy = false;
    } else {
        mav.addObject("affiliationsEmpty", true);
    }
    fundingMap = fundingMap(orcid, lastModifiedTime);
    if (fundingMap.size() > 0)
        isProfileEmtpy = false;
    else {
        mav.addObject("fundingEmpty", true);
    }
    peerReviewMap = peerReviewMap(orcid, lastModifiedTime);
    if (peerReviewMap.size() > 0) {
        isProfileEmtpy = false;
    } else {
        mav.addObject("peerReviewsEmpty", true);
    }
    ObjectMapper mapper = new ObjectMapper();
    try {
        String worksIdsJson = mapper.writeValueAsString(minimizedWorksMap.keySet());
        String affiliationIdsJson = mapper.writeValueAsString(affiliationMap.keySet());
        String fundingIdsJson = mapper.writeValueAsString(fundingMap.keySet());
        String peerReviewIdsJson = mapper.writeValueAsString(peerReviewMap.keySet());
        mav.addObject("workIdsJson", StringEscapeUtils.escapeEcmaScript(worksIdsJson));
        mav.addObject("affiliationIdsJson", StringEscapeUtils.escapeEcmaScript(affiliationIdsJson));
        mav.addObject("fundingIdsJson", StringEscapeUtils.escapeEcmaScript(fundingIdsJson));
        mav.addObject("peerReviewIdsJson", StringEscapeUtils.escapeEcmaScript(peerReviewIdsJson));
        mav.addObject("isProfileEmpty", isProfileEmtpy);
    } catch (JsonGenerationException e) {
        e.printStackTrace();
    } catch (JsonMappingException e) {
        e.printStackTrace();
    } catch (IOException e) {
        e.printStackTrace();
    }
    if (!profile.isReviewed()) {
        if (isProfileValidForIndex(profile)) {
            int countTokens = orcidOauth2TokenService.findCountByUserName(orcid, lastModifiedTime);
            if (!profile.isAccountNonLocked() || countTokens == 0 || (!CreationMethod.WEBSITE.value().equals(profile.getCreationMethod()) && !CreationMethod.DIRECT.value().equals(profile.getCreationMethod()))) {
                mav.addObject("noIndex", true);
            }
        } else {
            mav.addObject("noIndex", true);
        }
    }
    return mav;
}
Also used : Keywords(org.orcid.jaxb.model.record_v2.Keywords) Address(org.orcid.jaxb.model.record_v2.Address) OtherNames(org.orcid.jaxb.model.record_v2.OtherNames) HashMap(java.util.HashMap) LinkedHashMap(java.util.LinkedHashMap) Funding(org.orcid.jaxb.model.record_v2.Funding) ModelAndView(org.springframework.web.servlet.ModelAndView) OtherName(org.orcid.jaxb.model.record_v2.OtherName) Name(org.orcid.jaxb.model.record_v2.Name) LinkedHashMap(java.util.LinkedHashMap) Addresses(org.orcid.jaxb.model.record_v2.Addresses) JsonMappingException(com.fasterxml.jackson.databind.JsonMappingException) Biography(org.orcid.jaxb.model.record_v2.Biography) ResearcherUrls(org.orcid.jaxb.model.record_v2.ResearcherUrls) List(java.util.List) ArrayList(java.util.ArrayList) Emails(org.orcid.jaxb.model.record_v2.Emails) ObjectMapper(com.fasterxml.jackson.databind.ObjectMapper) Affiliation(org.orcid.jaxb.model.record_v2.Affiliation) LockedException(org.orcid.core.security.aop.LockedException) HttpSession(javax.servlet.http.HttpSession) OtherName(org.orcid.jaxb.model.record_v2.OtherName) IOException(java.io.IOException) PersonalDetails(org.orcid.jaxb.model.record_v2.PersonalDetails) ProfileEntity(org.orcid.persistence.jpa.entities.ProfileEntity) OrcidNotClaimedException(org.orcid.core.exception.OrcidNotClaimedException) OrcidDeprecatedException(org.orcid.core.exception.OrcidDeprecatedException) LockedException(org.orcid.core.security.aop.LockedException) JsonMappingException(com.fasterxml.jackson.databind.JsonMappingException) UnsupportedEncodingException(java.io.UnsupportedEncodingException) JsonGenerationException(com.fasterxml.jackson.core.JsonGenerationException) IOException(java.io.IOException) WorkForm(org.orcid.pojo.ajaxForm.WorkForm) PersonExternalIdentifiers(org.orcid.jaxb.model.record_v2.PersonExternalIdentifiers) OrcidDeprecatedException(org.orcid.core.exception.OrcidDeprecatedException) OrcidNotClaimedException(org.orcid.core.exception.OrcidNotClaimedException) JsonGenerationException(com.fasterxml.jackson.core.JsonGenerationException) PeerReview(org.orcid.jaxb.model.record_v2.PeerReview) RequestMapping(org.springframework.web.bind.annotation.RequestMapping)

Aggregations

Test (org.junit.Test)62 Keywords (org.orcid.jaxb.model.record_v2.Keywords)54 Keyword (org.orcid.jaxb.model.record_v2.Keyword)53 OtherNames (org.orcid.jaxb.model.record_v2.OtherNames)37 Address (org.orcid.jaxb.model.record_v2.Address)36 Biography (org.orcid.jaxb.model.record_v2.Biography)36 PersonExternalIdentifier (org.orcid.jaxb.model.record_v2.PersonExternalIdentifier)36 Addresses (org.orcid.jaxb.model.record_v2.Addresses)35 Email (org.orcid.jaxb.model.record_v2.Email)35 PersonExternalIdentifiers (org.orcid.jaxb.model.record_v2.PersonExternalIdentifiers)35 ResearcherUrl (org.orcid.jaxb.model.record_v2.ResearcherUrl)35 ResearcherUrls (org.orcid.jaxb.model.record_v2.ResearcherUrls)35 OtherName (org.orcid.jaxb.model.record_v2.OtherName)34 Emails (org.orcid.jaxb.model.record_v2.Emails)33 Name (org.orcid.jaxb.model.record_v2.Name)30 Person (org.orcid.jaxb.model.record_v2.Person)28 EducationSummary (org.orcid.jaxb.model.record.summary_v2.EducationSummary)17 EmploymentSummary (org.orcid.jaxb.model.record.summary_v2.EmploymentSummary)17 WorkSummary (org.orcid.jaxb.model.record.summary_v2.WorkSummary)17 Record (org.orcid.jaxb.model.record_v2.Record)17