Examples with OrcidError org.orcid.jaxb.model.v3.dev1.error.OrcidError used on opensource projects

Example 21 with OrcidError

use of org.orcid.jaxb.model.v3.dev1.error.OrcidError in project ORCID-Source by ORCID.

the class WorkManagerImpl method createWorks.

/**
 * Add a list of works to the given profile
 *
 * @param works
 *            The list of works that want to be added
 * @param orcid
 *            The id of the user we want to add the works to
 *
 * @return the work bulk with the put codes of the new works or the error
 *         that indicates why a work can't be added
 */
@Override
@Transactional
public WorkBulk createWorks(String orcid, WorkBulk workBulk) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    List<Work> existingWorks = this.findWorks(orcid);
    if (workBulk.getBulk() != null && !workBulk.getBulk().isEmpty()) {
        List<BulkElement> bulk = workBulk.getBulk();
        Set<ExternalID> existingExternalIdentifiers = buildExistingExternalIdsSet(existingWorks, sourceEntity.getSourceId());
        if ((existingWorks.size() + bulk.size()) > this.maxNumOfActivities) {
            throw new ExceedMaxNumberOfElementsException();
        }
        // Check bulk size
        if (bulk.size() > maxBulkSize) {
            Locale locale = localeManager.getLocale();
            throw new IllegalArgumentException(messageSource.getMessage("apiError.validation_too_many_elements_in_bulk.exception", new Object[] { maxBulkSize }, locale));
        }
        for (int i = 0; i < bulk.size(); i++) {
            if (Work.class.isAssignableFrom(bulk.get(i).getClass())) {
                Work work = (Work) bulk.get(i);
                try {
                    activityValidator.validateWork(work, sourceEntity, true, true, null);
                    // Validate it is not duplicated
                    if (work.getExternalIdentifiers() != null) {
                        for (ExternalID extId : work.getExternalIdentifiers().getExternalIdentifier()) {
                            // normalise the provided ID
                            extId.setNormalized(new TransientNonEmptyString(norm.normalise(extId.getType(), extId.getValue())));
                            // If the external id exists and is a SELF identifier, then mark it as duplicated
                            if (existingExternalIdentifiers.contains(extId) && Relationship.SELF.equals(extId.getRelationship())) {
                                Map<String, String> params = new HashMap<String, String>();
                                params.put("clientName", sourceEntity.getSourceName());
                                throw new OrcidDuplicatedActivityException(params);
                            }
                        }
                    }
                    // Save the work
                    WorkEntity workEntity = jpaJaxbWorkAdapter.toWorkEntity(work);
                    ProfileEntity profile = profileEntityCacheManager.retrieve(orcid);
                    workEntity.setOrcid(orcid);
                    workEntity.setAddedToProfileDate(new Date());
                    // Set source id
                    if (sourceEntity.getSourceProfile() != null) {
                        workEntity.setSourceId(sourceEntity.getSourceProfile().getId());
                    }
                    if (sourceEntity.getSourceClient() != null) {
                        workEntity.setClientSourceId(sourceEntity.getSourceClient().getId());
                    }
                    setIncomingWorkPrivacy(workEntity, profile);
                    DisplayIndexCalculatorHelper.setDisplayIndexOnNewEntity(workEntity, true);
                    workDao.persist(workEntity);
                    // Update the element in the bulk
                    Work updatedWork = jpaJaxbWorkAdapter.toWork(workEntity);
                    bulk.set(i, updatedWork);
                    // Add the work extIds to the list of existing external identifiers
                    addExternalIdsToExistingSet(updatedWork, existingExternalIdentifiers);
                } catch (Exception e) {
                    // Get the exception
                    OrcidError orcidError = orcidCoreExceptionMapper.getV3OrcidError(e);
                    bulk.set(i, orcidError);
                }
            }
        }
        workDao.flush();
    }
    return workBulk;
}

Example 22 with OrcidError

use of org.orcid.jaxb.model.v3.dev1.error.OrcidError in project ORCID-Source by ORCID.

the class PublicAPISecurityManagerV3Impl method filter.

@Override
public void filter(WorkBulk workBulk) {
    if (workBulk != null && workBulk.getBulk() != null) {
        List<BulkElement> filtered = new ArrayList<>();
        for (int i = 0; i < workBulk.getBulk().size(); i++) {
            BulkElement bulkElement = workBulk.getBulk().get(i);
            if (bulkElement instanceof OrcidError) {
                filtered.add(bulkElement);
            } else {
                try {
                    checkIsPublic((Work) bulkElement);
                    filtered.add(bulkElement);
                } catch (OrcidNonPublicElementException e) {
                    filtered.add(orcidCoreExceptionMapper.getV3OrcidError(e));
                }
            }
        }
        workBulk.setBulk(filtered);
    }
}

Example 23 with OrcidError

use of org.orcid.jaxb.model.v3.dev1.error.OrcidError in project ORCID-Source by ORCID.

the class MemberV3ApiServiceDelegator_WorksTest method testCreateBulkWorksWithBlankTitles.

@Test
public void testCreateBulkWorksWithBlankTitles() {
    RequestAttributes previousAttrs = RequestContextHolder.getRequestAttributes();
    RequestAttributes attrs = new ServletRequestAttributes(new MockHttpServletRequest());
    attrs.setAttribute(ApiVersionFilter.API_VERSION_REQUEST_ATTRIBUTE_NAME, "3.0_dev1", RequestAttributes.SCOPE_REQUEST);
    RequestContextHolder.setRequestAttributes(attrs);
    Long time = System.currentTimeMillis();
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED, ScopePathType.ACTIVITIES_UPDATE);
    WorkBulk bulk = new WorkBulk();
    for (int i = 0; i < 5; i++) {
        Work work = new Work();
        WorkTitle title = new WorkTitle();
        title.setTitle(i == 0 ? new Title(" ") : new Title("title " + i));
        work.setWorkTitle(title);
        ExternalIDs extIds = new ExternalIDs();
        ExternalID extId = new ExternalID();
        extId.setRelationship(Relationship.SELF);
        extId.setType("doi");
        extId.setUrl(new Url("http://doi/" + i + "/" + time));
        extId.setValue("doi-" + i + "-" + time);
        extIds.getExternalIdentifier().add(extId);
        work.setWorkExternalIdentifiers(extIds);
        work.setWorkType(WorkType.BOOK);
        bulk.getBulk().add(work);
    }
    Response response = serviceDelegator.createWorks(ORCID, bulk);
    assertNotNull(response);
    assertEquals(Response.Status.OK.getStatusCode(), response.getStatus());
    bulk = (WorkBulk) response.getEntity();
    assertNotNull(bulk);
    assertEquals(5, bulk.getBulk().size());
    for (int i = 0; i < 5; i++) {
        if (i == 0) {
            assertTrue(bulk.getBulk().get(i) instanceof OrcidError);
        } else {
            assertTrue(bulk.getBulk().get(i) instanceof Work);
            serviceDelegator.deleteWork(ORCID, ((Work) bulk.getBulk().get(i)).getPutCode());
        }
    }
    RequestContextHolder.setRequestAttributes(previousAttrs);
}

Example 24 with OrcidError

use of org.orcid.jaxb.model.v3.dev1.error.OrcidError in project ORCID-Source by ORCID.

the class MemberV3ApiServiceDelegator_WorksTest method testViewBulkWorks.

@Test
public void testViewBulkWorks() {
    SecurityContextTestUtils.setUpSecurityContext(ORCID, ScopePathType.READ_LIMITED);
    Response response = serviceDelegator.viewBulkWorks(ORCID, "11,12,13,16");
    WorkBulk workBulk = (WorkBulk) response.getEntity();
    assertNotNull(workBulk);
    assertNotNull(workBulk.getBulk());
    assertEquals(4, workBulk.getBulk().size());
    assertTrue(workBulk.getBulk().get(0) instanceof Work);
    assertTrue(workBulk.getBulk().get(1) instanceof Work);
    // private work but matching source
    assertTrue(workBulk.getBulk().get(2) instanceof Work);
    // private work not matching source
    assertTrue(workBulk.getBulk().get(3) instanceof OrcidError);
}

Example 25 with OrcidError

use of org.orcid.jaxb.model.v3.dev1.error.OrcidError in project ORCID-Source by ORCID.

the class ResearcherUrlsTest method testCreateGetUpdateAndDeleteResearcherUrl.

@Test
public void testCreateGetUpdateAndDeleteResearcherUrl() throws InterruptedException, JSONException, URISyntaxException {
    String accessToken = getAccessToken();
    assertNotNull(accessToken);
    org.orcid.jaxb.model.v3.dev1.record.ResearcherUrl rUrlToCreate = new org.orcid.jaxb.model.v3.dev1.record.ResearcherUrl();
    long time = System.currentTimeMillis();
    String url = "http://test.orcid.org/test/" + time;
    rUrlToCreate.setUrl(new org.orcid.jaxb.model.v3.dev1.common.Url(url));
    rUrlToCreate.setUrlName(url);
    // Create
    ClientResponse postResponse = memberV3Dev1ApiClient.createResearcherUrls(getUser1OrcidId(), rUrlToCreate, accessToken);
    assertNotNull(postResponse);
    assertEquals(Response.Status.CREATED.getStatusCode(), postResponse.getStatus());
    String locationPath = postResponse.getLocation().getPath();
    assertTrue("Location header path should match pattern, but was " + locationPath, locationPath.matches(".*/v3.0_dev1/" + getUser1OrcidId() + "/researcher-urls/\\d+"));
    // Read
    ClientResponse getResponse = memberV3Dev1ApiClient.viewLocationXml(postResponse.getLocation(), accessToken);
    assertEquals(Response.Status.OK.getStatusCode(), getResponse.getStatus());
    org.orcid.jaxb.model.v3.dev1.record.ResearcherUrl gotResearcherUrl = getResponse.getEntity(org.orcid.jaxb.model.v3.dev1.record.ResearcherUrl.class);
    assertNotNull(gotResearcherUrl);
    assertNotNull(gotResearcherUrl.getPutCode());
    assertNotNull(gotResearcherUrl.getSource());
    assertNotNull(gotResearcherUrl.getCreatedDate());
    assertNotNull(gotResearcherUrl.getLastModifiedDate());
    assertEquals(getClient1ClientId(), gotResearcherUrl.getSource().retrieveSourcePath());
    assertEquals("http://test.orcid.org/test/" + time, gotResearcherUrl.getUrl().getValue());
    assertEquals("http://test.orcid.org/test/" + time, gotResearcherUrl.getUrlName());
    assertEquals("public", gotResearcherUrl.getVisibility().value());
    assertNotNull(gotResearcherUrl.getDisplayIndex());
    Long originalDisplayIndex = gotResearcherUrl.getDisplayIndex();
    // Save the original visibility
    org.orcid.jaxb.model.v3.dev1.common.Visibility originalVisibility = gotResearcherUrl.getVisibility();
    org.orcid.jaxb.model.v3.dev1.common.Visibility updatedVisibility = org.orcid.jaxb.model.v3.dev1.common.Visibility.PRIVATE.equals(originalVisibility) ? org.orcid.jaxb.model.v3.dev1.common.Visibility.LIMITED : org.orcid.jaxb.model.v3.dev1.common.Visibility.PRIVATE;
    // Verify you cant update the visibility
    gotResearcherUrl.setVisibility(updatedVisibility);
    ClientResponse putResponse = memberV3Dev1ApiClient.updateLocationXml(postResponse.getLocation(), accessToken, gotResearcherUrl);
    assertEquals(Response.Status.FORBIDDEN.getStatusCode(), putResponse.getStatus());
    org.orcid.jaxb.model.error_v2.OrcidError error = putResponse.getEntity(org.orcid.jaxb.model.error_v2.OrcidError.class);
    assertNotNull(error);
    assertEquals(Integer.valueOf(9035), error.getErrorCode());
    // Set the visibility again to the initial one
    gotResearcherUrl.setVisibility(originalVisibility);
    // Update
    org.orcid.jaxb.model.v3.dev1.common.LastModifiedDate initialLastModified = gotResearcherUrl.getLastModifiedDate();
    Long currentTime = System.currentTimeMillis();
    gotResearcherUrl.setUrlName(gotResearcherUrl.getUrlName() + " - " + currentTime);
    gotResearcherUrl.getUrl().setValue(gotResearcherUrl.getUrl().getValue() + currentTime);
    ClientResponse updatedResearcherUrlResponse = memberV3Dev1ApiClient.updateResearcherUrls(getUser1OrcidId(), gotResearcherUrl, accessToken);
    assertNotNull(updatedResearcherUrlResponse);
    assertEquals(Response.Status.OK.getStatusCode(), updatedResearcherUrlResponse.getStatus());
    org.orcid.jaxb.model.v3.dev1.record.ResearcherUrl updatedResearcherUrl = updatedResearcherUrlResponse.getEntity(org.orcid.jaxb.model.v3.dev1.record.ResearcherUrl.class);
    assertNotNull(updatedResearcherUrl);
    assertEquals("http://test.orcid.org/test/" + time + currentTime, updatedResearcherUrl.getUrl().getValue());
    assertEquals("http://test.orcid.org/test/" + time + " - " + currentTime, updatedResearcherUrl.getUrlName());
    assertEquals(originalDisplayIndex, updatedResearcherUrl.getDisplayIndex());
    // Keep it public, since it is more restrictive than the user visibility
    // default
    assertEquals(org.orcid.jaxb.model.v3.dev1.common.Visibility.PUBLIC, updatedResearcherUrl.getVisibility());
    assertFalse(initialLastModified.equals(updatedResearcherUrl.getLastModifiedDate()));
    // Delete
    ClientResponse deleteResponse = memberV3Dev1ApiClient.deleteResearcherUrl(getUser1OrcidId(), gotResearcherUrl.getPutCode(), accessToken);
    assertEquals(Response.Status.NO_CONTENT.getStatusCode(), deleteResponse.getStatus());
}