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Example 91 with Work

use of org.orcid.jaxb.model.v3.dev1.record.Work in project ORCID-Source by ORCID.

the class WorkManagerImpl method createNewWorkGroup.

@Override
public void createNewWorkGroup(List<Long> workIds, String orcid) {
    List<MinimizedWorkEntity> works = workEntityCacheManager.retrieveMinimizedWorks(orcid, workIds, getLastModified(orcid));
    JSONWorkExternalIdentifiersConverterV3 externalIdConverter = new JSONWorkExternalIdentifiersConverterV3(norm, localeManager);
    ExternalIDs allExternalIDs = new ExternalIDs();
    MinimizedWorkEntity userVersion = null;
    MinimizedWorkEntity userPreferred = null;
    for (MinimizedWorkEntity work : works) {
        if (orcid.equals(work.getSourceId())) {
            userVersion = work;
        }
        if (userPreferred == null || userPreferred.getDisplayIndex() < work.getDisplayIndex()) {
            userPreferred = work;
        }
        ExternalIDs externalIDs = externalIdConverter.convertFrom(work.getExternalIdentifiersJson(), null);
        for (ExternalID externalID : externalIDs.getExternalIdentifier()) {
            if (!allExternalIDs.getExternalIdentifier().contains(externalID)) {
                allExternalIDs.getExternalIdentifier().add(externalID);
            }
        }
    }
    String externalIDsJson = externalIdConverter.convertTo(allExternalIDs, null);
    if (userVersion != null) {
        userVersion.setExternalIdentifiersJson(externalIDsJson);
    } else {
        WorkEntity allPreferredMetadata = createCopyOfUserPreferredWork(userPreferred);
        allPreferredMetadata.setExternalIdentifiersJson(externalIDsJson);
        workDao.persist(allPreferredMetadata);
    }
}
Also used : WorkEntity(org.orcid.persistence.jpa.entities.WorkEntity) MinimizedWorkEntity(org.orcid.persistence.jpa.entities.MinimizedWorkEntity) ExternalIDs(org.orcid.jaxb.model.v3.dev1.record.ExternalIDs) JSONWorkExternalIdentifiersConverterV3(org.orcid.core.adapter.jsonidentifier.converter.JSONWorkExternalIdentifiersConverterV3) MinimizedWorkEntity(org.orcid.persistence.jpa.entities.MinimizedWorkEntity) ExternalID(org.orcid.jaxb.model.v3.dev1.record.ExternalID) TransientNonEmptyString(org.orcid.jaxb.model.v3.dev1.common.TransientNonEmptyString)

Example 92 with Work

use of org.orcid.jaxb.model.v3.dev1.record.Work in project ORCID-Source by ORCID.

the class WorkManagerImpl method createWorks.

/**
 * Add a list of works to the given profile
 *
 * @param works
 *            The list of works that want to be added
 * @param orcid
 *            The id of the user we want to add the works to
 *
 * @return the work bulk with the put codes of the new works or the error
 *         that indicates why a work can't be added
 */
@Override
@Transactional
public WorkBulk createWorks(String orcid, WorkBulk workBulk) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    List<Work> existingWorks = this.findWorks(orcid);
    if (workBulk.getBulk() != null && !workBulk.getBulk().isEmpty()) {
        List<BulkElement> bulk = workBulk.getBulk();
        Set<ExternalID> existingExternalIdentifiers = buildExistingExternalIdsSet(existingWorks, sourceEntity.getSourceId());
        if ((existingWorks.size() + bulk.size()) > this.maxNumOfActivities) {
            throw new ExceedMaxNumberOfElementsException();
        }
        // Check bulk size
        if (bulk.size() > maxBulkSize) {
            Locale locale = localeManager.getLocale();
            throw new IllegalArgumentException(messageSource.getMessage("apiError.validation_too_many_elements_in_bulk.exception", new Object[] { maxBulkSize }, locale));
        }
        for (int i = 0; i < bulk.size(); i++) {
            if (Work.class.isAssignableFrom(bulk.get(i).getClass())) {
                Work work = (Work) bulk.get(i);
                try {
                    activityValidator.validateWork(work, sourceEntity, true, true, null);
                    // Validate it is not duplicated
                    if (work.getExternalIdentifiers() != null) {
                        for (ExternalID extId : work.getExternalIdentifiers().getExternalIdentifier()) {
                            // normalise the provided ID
                            extId.setNormalized(new TransientNonEmptyString(norm.normalise(extId.getType(), extId.getValue())));
                            // If the external id exists and is a SELF identifier, then mark it as duplicated
                            if (existingExternalIdentifiers.contains(extId) && Relationship.SELF.equals(extId.getRelationship())) {
                                Map<String, String> params = new HashMap<String, String>();
                                params.put("clientName", sourceEntity.getSourceName());
                                throw new OrcidDuplicatedActivityException(params);
                            }
                        }
                    }
                    // Save the work
                    WorkEntity workEntity = jpaJaxbWorkAdapter.toWorkEntity(work);
                    ProfileEntity profile = profileEntityCacheManager.retrieve(orcid);
                    workEntity.setOrcid(orcid);
                    workEntity.setAddedToProfileDate(new Date());
                    // Set source id
                    if (sourceEntity.getSourceProfile() != null) {
                        workEntity.setSourceId(sourceEntity.getSourceProfile().getId());
                    }
                    if (sourceEntity.getSourceClient() != null) {
                        workEntity.setClientSourceId(sourceEntity.getSourceClient().getId());
                    }
                    setIncomingWorkPrivacy(workEntity, profile);
                    DisplayIndexCalculatorHelper.setDisplayIndexOnNewEntity(workEntity, true);
                    workDao.persist(workEntity);
                    // Update the element in the bulk
                    Work updatedWork = jpaJaxbWorkAdapter.toWork(workEntity);
                    bulk.set(i, updatedWork);
                    // Add the work extIds to the list of existing external identifiers
                    addExternalIdsToExistingSet(updatedWork, existingExternalIdentifiers);
                } catch (Exception e) {
                    // Get the exception
                    OrcidError orcidError = orcidCoreExceptionMapper.getV3OrcidError(e);
                    bulk.set(i, orcidError);
                }
            }
        }
        workDao.flush();
    }
    return workBulk;
}
Also used : Locale(java.util.Locale) OrcidError(org.orcid.jaxb.model.v3.dev1.error.OrcidError) HashMap(java.util.HashMap) SourceEntity(org.orcid.persistence.jpa.entities.SourceEntity) ExternalID(org.orcid.jaxb.model.v3.dev1.record.ExternalID) ExceedMaxNumberOfElementsException(org.orcid.core.exception.ExceedMaxNumberOfElementsException) TransientNonEmptyString(org.orcid.jaxb.model.v3.dev1.common.TransientNonEmptyString) TransientNonEmptyString(org.orcid.jaxb.model.v3.dev1.common.TransientNonEmptyString) ProfileEntity(org.orcid.persistence.jpa.entities.ProfileEntity) Date(java.util.Date) OrcidDuplicatedActivityException(org.orcid.core.exception.OrcidDuplicatedActivityException) ExceedMaxNumberOfElementsException(org.orcid.core.exception.ExceedMaxNumberOfElementsException) WorkEntity(org.orcid.persistence.jpa.entities.WorkEntity) MinimizedWorkEntity(org.orcid.persistence.jpa.entities.MinimizedWorkEntity) BulkElement(org.orcid.jaxb.model.record.bulk.BulkElement) OrcidDuplicatedActivityException(org.orcid.core.exception.OrcidDuplicatedActivityException) Work(org.orcid.jaxb.model.v3.dev1.record.Work) Transactional(org.springframework.transaction.annotation.Transactional)

Example 93 with Work

use of org.orcid.jaxb.model.v3.dev1.record.Work in project ORCID-Source by ORCID.

the class WorkManagerImpl method updateWork.

@Override
@Transactional
public Work updateWork(String orcid, Work work, boolean isApiRequest) {
    WorkEntity workEntity = workDao.getWork(orcid, work.getPutCode());
    Visibility originalVisibility = Visibility.fromValue(workEntity.getVisibility().value());
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    // Save the original source
    String existingSourceId = workEntity.getSourceId();
    String existingClientSourceId = workEntity.getClientSourceId();
    if (isApiRequest) {
        activityValidator.validateWork(work, sourceEntity, false, isApiRequest, Visibility.fromValue(workEntity.getVisibility().value()));
        List<Work> existingWorks = this.findWorks(orcid);
        for (Work existing : existingWorks) {
            // Dont compare the updated peer review with the DB version
            if (!existing.getPutCode().equals(work.getPutCode())) {
                activityValidator.checkExternalIdentifiersForDuplicates(work.getExternalIdentifiers(), existing.getExternalIdentifiers(), existing.getSource(), sourceEntity);
            }
        }
    } else {
        // validate external ID vocab
        externalIDValidator.validateWorkOrPeerReview(work.getExternalIdentifiers());
    }
    orcidSecurityManager.checkSource(workEntity);
    jpaJaxbWorkAdapter.toWorkEntity(work, workEntity);
    workEntity.setVisibility(org.orcid.jaxb.model.common_v2.Visibility.fromValue(originalVisibility.value()));
    // Be sure it doesn't overwrite the source
    workEntity.setSourceId(existingSourceId);
    workEntity.setClientSourceId(existingClientSourceId);
    workDao.merge(workEntity);
    workDao.flush();
    notificationManager.sendAmendEmail(orcid, AmendedSection.WORK, createItemList(workEntity));
    return jpaJaxbWorkAdapter.toWork(workEntity);
}
Also used : WorkEntity(org.orcid.persistence.jpa.entities.WorkEntity) MinimizedWorkEntity(org.orcid.persistence.jpa.entities.MinimizedWorkEntity) SourceEntity(org.orcid.persistence.jpa.entities.SourceEntity) Work(org.orcid.jaxb.model.v3.dev1.record.Work) Visibility(org.orcid.jaxb.model.v3.dev1.common.Visibility) TransientNonEmptyString(org.orcid.jaxb.model.v3.dev1.common.TransientNonEmptyString) Transactional(org.springframework.transaction.annotation.Transactional)

Example 94 with Work

use of org.orcid.jaxb.model.v3.dev1.record.Work in project ORCID-Source by ORCID.

the class TransientNonEmptyStringTest method testMarshal.

/**
 *    <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
 *    <common:external-ids xmlns:internal="http://www.orcid.org/ns/internal" xmlns:address="http://www.orcid.org/ns/address" xmlns:email="http://www.orcid.org/ns/email" xmlns:history="http://www.orcid.org/ns/history" xmlns:employment="http://www.orcid.org/ns/employment" xmlns:person="http://www.orcid.org/ns/person" xmlns:education="http://www.orcid.org/ns/education" xmlns:other-name="http://www.orcid.org/ns/other-name" xmlns:personal-details="http://www.orcid.org/ns/personal-details" xmlns:bulk="http://www.orcid.org/ns/bulk" xmlns:common="http://www.orcid.org/ns/common" xmlns:record="http://www.orcid.org/ns/record" xmlns:keyword="http://www.orcid.org/ns/keyword" xmlns:activities="http://www.orcid.org/ns/activities" xmlns:deprecated="http://www.orcid.org/ns/deprecated" xmlns:external-identifier="http://www.orcid.org/ns/external-identifier" xmlns:funding="http://www.orcid.org/ns/funding" xmlns:error="http://www.orcid.org/ns/error" xmlns:preferences="http://www.orcid.org/ns/preferences" xmlns:work="http://www.orcid.org/ns/work" xmlns:researcher-url="http://www.orcid.org/ns/researcher-url" xmlns:peer-review="http://www.orcid.org/ns/peer-review">
 *        <common:external-id>
 *            <common:external-id-type>doi</common:external-id-type>
 *            <common:external-id-value>value</common:external-id-value>
 *            <common:external-id-normalized transient="true">normalized-value</common:external-id-normalized>
 *        </common:external-id>
 *    </common:external-ids>
 * @throws JAXBException
 * @throws SAXException
 * @throws IOException
 */
@Test
public void testMarshal() throws JAXBException, SAXException, IOException {
    ExternalIDs ids = new ExternalIDs();
    ExternalID id = new ExternalID();
    id.setType("doi");
    id.setValue("value");
    id.setNormalized(new TransientNonEmptyString("normalized-value"));
    ids.getExternalIdentifier().add(id);
    JAXBContext context = JAXBContext.newInstance(ExternalIDs.class);
    Marshaller marshaller = context.createMarshaller();
    StringWriter sw = new StringWriter();
    marshaller.marshal(ids, sw);
    assertTrue(sw.toString().contains("<common:external-id-normalized transient=\"true\">normalized-value</common:external-id-normalized>"));
    SchemaFactory factory = SchemaFactory.newInstance("http://www.w3.org/2001/XMLSchema");
    Schema schema = factory.newSchema(getClass().getResource("/common_3.0_dev1/common-3.0_dev1.xsd"));
    Validator validator = schema.newValidator();
    validator.validate(new JAXBSource(context, ids));
}
Also used : SchemaFactory(javax.xml.validation.SchemaFactory) Marshaller(javax.xml.bind.Marshaller) ExternalIDs(org.orcid.jaxb.model.v3.dev1.record.ExternalIDs) StringWriter(java.io.StringWriter) ExternalID(org.orcid.jaxb.model.v3.dev1.record.ExternalID) Schema(javax.xml.validation.Schema) JAXBContext(javax.xml.bind.JAXBContext) TransientNonEmptyString(org.orcid.jaxb.model.v3.dev1.common.TransientNonEmptyString) Validator(javax.xml.validation.Validator) JAXBSource(javax.xml.bind.util.JAXBSource) Test(org.junit.Test)

Example 95 with Work

use of org.orcid.jaxb.model.v3.dev1.record.Work in project ORCID-Source by ORCID.

the class ValidateV3_dev1SamplesTest method testUnmarshallRecord.

@Test
public void testUnmarshallRecord() throws SAXException, URISyntaxException {
    Record record = (Record) unmarshallFromPath("/record_3.0_dev1/samples/read_samples/record-3.0_dev1.xml", Record.class, "/record_3.0_dev1/record-3.0_dev1.xsd");
    assertNotNull(record);
    // Check activities
    assertNotNull(record.getActivitiesSummary());
    ActivitiesSummary activities = record.getActivitiesSummary();
    assertNotNull(activities.getLastModifiedDate());
    assertNotNull(activities.getDistinctions());
    Distinctions distinctions = activities.getDistinctions();
    assertNotNull(distinctions.getLastModifiedDate());
    assertEquals(1, distinctions.getSummaries().size());
    DistinctionSummary distinction = distinctions.getSummaries().get(0);
    assertEquals(Long.valueOf(0), distinction.getPutCode());
    assertEquals(Visibility.PRIVATE, distinction.getVisibility());
    assertEquals("distinction:department-name", distinction.getDepartmentName());
    assertEquals("distinction:role-title", distinction.getRoleTitle());
    assertNotNull(distinction.getEndDate());
    assertEquals("02", distinction.getEndDate().getDay().getValue());
    assertEquals("02", distinction.getEndDate().getMonth().getValue());
    assertEquals("1848", distinction.getEndDate().getYear().getValue());
    assertNotNull(distinction.getStartDate());
    assertEquals("02", distinction.getStartDate().getDay().getValue());
    assertEquals("02", distinction.getStartDate().getMonth().getValue());
    assertEquals("1848", distinction.getStartDate().getYear().getValue());
    assertNotNull(distinction.getOrganization());
    assertEquals("common:name", distinction.getOrganization().getName());
    assertEquals("common:city", distinction.getOrganization().getAddress().getCity());
    assertEquals("common:region", distinction.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, distinction.getOrganization().getAddress().getCountry());
    assertNotNull(activities.getEducations());
    Educations educations = activities.getEducations();
    assertNotNull(educations.getLastModifiedDate());
    assertEquals(1, educations.getSummaries().size());
    EducationSummary education = educations.getSummaries().get(0);
    assertEquals(Long.valueOf(0), education.getPutCode());
    assertEquals(Visibility.PRIVATE, education.getVisibility());
    assertEquals("education:department-name", education.getDepartmentName());
    assertEquals("education:role-title", education.getRoleTitle());
    assertNotNull(education.getEndDate());
    assertEquals("02", education.getEndDate().getDay().getValue());
    assertEquals("02", education.getEndDate().getMonth().getValue());
    assertEquals("1848", education.getEndDate().getYear().getValue());
    assertNotNull(education.getStartDate());
    assertEquals("02", education.getStartDate().getDay().getValue());
    assertEquals("02", education.getStartDate().getMonth().getValue());
    assertEquals("1848", education.getStartDate().getYear().getValue());
    assertNotNull(education.getOrganization());
    assertEquals("common:name", education.getOrganization().getName());
    assertEquals("common:city", education.getOrganization().getAddress().getCity());
    assertEquals("common:region", education.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, education.getOrganization().getAddress().getCountry());
    assertNotNull(activities.getEmployments());
    Employments employments = activities.getEmployments();
    assertNotNull(employments.getLastModifiedDate());
    assertEquals(1, employments.getSummaries().size());
    EmploymentSummary employment = employments.getSummaries().get(0);
    assertEquals(Long.valueOf(0), employment.getPutCode());
    assertEquals(Visibility.PRIVATE, employment.getVisibility());
    assertEquals("employment:department-name", employment.getDepartmentName());
    assertEquals("employment:role-title", employment.getRoleTitle());
    assertNotNull(employment.getEndDate());
    assertEquals("02", employment.getEndDate().getDay().getValue());
    assertEquals("02", employment.getEndDate().getMonth().getValue());
    assertEquals("1848", employment.getEndDate().getYear().getValue());
    assertNotNull(employment.getStartDate());
    assertEquals("02", employment.getStartDate().getDay().getValue());
    assertEquals("02", employment.getStartDate().getMonth().getValue());
    assertEquals("1848", employment.getStartDate().getYear().getValue());
    assertNotNull(employment.getOrganization());
    assertEquals("common:name", employment.getOrganization().getName());
    assertEquals("common:city", employment.getOrganization().getAddress().getCity());
    assertEquals("common:region", employment.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, employment.getOrganization().getAddress().getCountry());
    assertNotNull(activities.getInvitedPositions());
    InvitedPositions invitedPositions = activities.getInvitedPositions();
    assertNotNull(invitedPositions.getLastModifiedDate());
    assertEquals(1, invitedPositions.getSummaries().size());
    InvitedPositionSummary invitedPosition = invitedPositions.getSummaries().get(0);
    assertEquals(Long.valueOf(0), invitedPosition.getPutCode());
    assertEquals(Visibility.PRIVATE, invitedPosition.getVisibility());
    assertEquals("invited-position:department-name", invitedPosition.getDepartmentName());
    assertEquals("invited-position:role-title", invitedPosition.getRoleTitle());
    assertNotNull(invitedPosition.getEndDate());
    assertEquals("02", invitedPosition.getEndDate().getDay().getValue());
    assertEquals("02", invitedPosition.getEndDate().getMonth().getValue());
    assertEquals("1848", invitedPosition.getEndDate().getYear().getValue());
    assertNotNull(invitedPosition.getStartDate());
    assertEquals("02", invitedPosition.getStartDate().getDay().getValue());
    assertEquals("02", invitedPosition.getStartDate().getMonth().getValue());
    assertEquals("1848", invitedPosition.getStartDate().getYear().getValue());
    assertNotNull(invitedPosition.getOrganization());
    assertEquals("common:name", invitedPosition.getOrganization().getName());
    assertEquals("common:city", invitedPosition.getOrganization().getAddress().getCity());
    assertEquals("common:region", invitedPosition.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, invitedPosition.getOrganization().getAddress().getCountry());
    assertNotNull(activities.getFundings());
    Fundings fundings = activities.getFundings();
    assertNotNull(fundings.getLastModifiedDate());
    assertEquals(1, fundings.getFundingGroup().size());
    assertNotNull(fundings.getFundingGroup().get(0).getLastModifiedDate());
    assertEquals(1, fundings.getFundingGroup().get(0).getFundingSummary().size());
    assertEquals(1, fundings.getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals("grant_number", fundings.getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getType());
    assertEquals("external-id-value", fundings.getFundingGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(1, fundings.getFundingGroup().get(0).getFundingSummary().size());
    FundingSummary funding = fundings.getFundingGroup().get(0).getFundingSummary().get(0);
    assertEquals(Long.valueOf(0), funding.getPutCode());
    assertEquals(Visibility.PRIVATE, funding.getVisibility());
    assertNotNull(funding.getTitle());
    assertEquals("common:title", funding.getTitle().getTitle().getContent());
    assertEquals("common:translated-title", funding.getTitle().getTranslatedTitle().getContent());
    assertEquals("en", funding.getTitle().getTranslatedTitle().getLanguageCode());
    assertNotNull(funding.getExternalIdentifiers());
    assertEquals(1, funding.getExternalIdentifiers().getExternalIdentifier().size());
    assertEquals(Relationship.SELF, funding.getExternalIdentifiers().getExternalIdentifier().get(0).getRelationship());
    assertEquals("grant_number", funding.getExternalIdentifiers().getExternalIdentifier().get(0).getType());
    assertEquals("http://tempuri.org", funding.getExternalIdentifiers().getExternalIdentifier().get(0).getUrl().getValue());
    assertEquals("external-id-value", funding.getExternalIdentifiers().getExternalIdentifier().get(0).getValue());
    assertNotNull(funding.getEndDate());
    assertEquals("02", funding.getEndDate().getDay().getValue());
    assertEquals("02", funding.getEndDate().getMonth().getValue());
    assertEquals("1848", funding.getEndDate().getYear().getValue());
    assertNotNull(funding.getStartDate());
    assertEquals("02", funding.getStartDate().getDay().getValue());
    assertEquals("02", funding.getStartDate().getMonth().getValue());
    assertEquals("1848", funding.getStartDate().getYear().getValue());
    assertNotNull(activities.getMemberships());
    Memberships memberships = activities.getMemberships();
    assertNotNull(memberships.getLastModifiedDate());
    assertEquals(1, memberships.getSummaries().size());
    MembershipSummary membership = memberships.getSummaries().get(0);
    assertEquals(Long.valueOf(0), membership.getPutCode());
    assertEquals(Visibility.PRIVATE, membership.getVisibility());
    assertEquals("membership:department-name", membership.getDepartmentName());
    assertEquals("membership:role-title", membership.getRoleTitle());
    assertNotNull(membership.getEndDate());
    assertEquals("02", membership.getEndDate().getDay().getValue());
    assertEquals("02", membership.getEndDate().getMonth().getValue());
    assertEquals("1848", membership.getEndDate().getYear().getValue());
    assertNotNull(membership.getStartDate());
    assertEquals("02", membership.getStartDate().getDay().getValue());
    assertEquals("02", membership.getStartDate().getMonth().getValue());
    assertEquals("1848", membership.getStartDate().getYear().getValue());
    assertNotNull(membership.getOrganization());
    assertEquals("common:name", membership.getOrganization().getName());
    assertEquals("common:city", membership.getOrganization().getAddress().getCity());
    assertEquals("common:region", membership.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, membership.getOrganization().getAddress().getCountry());
    assertNotNull(funding.getOrganization());
    assertEquals("common:name", funding.getOrganization().getName());
    assertEquals("common:city", funding.getOrganization().getAddress().getCity());
    assertEquals("common:region", funding.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, funding.getOrganization().getAddress().getCountry());
    assertNotNull(activities.getPeerReviews());
    assertNotNull(activities.getPeerReviews().getLastModifiedDate());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup());
    assertEquals(1, activities.getPeerReviews().getPeerReviewGroup().size());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier());
    assertEquals(1, activities.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getType());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getUrl());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getRelationship());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary());
    assertEquals(1, activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().size());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getCompletionDate());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getCompletionDate().getDay());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getCompletionDate().getMonth());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getCompletionDate().getYear());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getCreatedDate());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getCreatedDate().getValue());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getDisplayIndex());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier());
    assertEquals(1, activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().size());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getType());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getValue());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getUrl());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getExternalIdentifiers().getExternalIdentifier().get(0).getRelationship());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getGroupId());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getLastModifiedDate());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getOrganization());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getOrganization().getAddress());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getOrganization().getAddress().getCity());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getOrganization().getAddress().getCountry());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getOrganization().getAddress().getRegion());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getOrganization().getName());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getPutCode());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getSource());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getSource().retrieveSourcePath());
    assertNotNull(activities.getPeerReviews().getPeerReviewGroup().get(0).getPeerReviewSummary().get(0).getVisibility());
    assertNotNull(activities.getQualifications());
    Qualifications qualifications = activities.getQualifications();
    assertNotNull(qualifications.getLastModifiedDate());
    assertEquals(1, qualifications.getSummaries().size());
    QualificationSummary qualification = qualifications.getSummaries().get(0);
    assertEquals(Long.valueOf(0), qualification.getPutCode());
    assertEquals(Visibility.PRIVATE, qualification.getVisibility());
    assertEquals("qualification:department-name", qualification.getDepartmentName());
    assertEquals("qualification:role-title", qualification.getRoleTitle());
    assertNotNull(qualification.getEndDate());
    assertEquals("02", qualification.getEndDate().getDay().getValue());
    assertEquals("02", qualification.getEndDate().getMonth().getValue());
    assertEquals("1848", qualification.getEndDate().getYear().getValue());
    assertNotNull(qualification.getStartDate());
    assertEquals("02", qualification.getStartDate().getDay().getValue());
    assertEquals("02", qualification.getStartDate().getMonth().getValue());
    assertEquals("1848", qualification.getStartDate().getYear().getValue());
    assertNotNull(qualification.getOrganization());
    assertEquals("common:name", qualification.getOrganization().getName());
    assertEquals("common:city", qualification.getOrganization().getAddress().getCity());
    assertEquals("common:region", qualification.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, qualification.getOrganization().getAddress().getCountry());
    assertNotNull(activities.getServices());
    Services services = activities.getServices();
    assertNotNull(services.getLastModifiedDate());
    assertEquals(1, services.getSummaries().size());
    ServiceSummary service = services.getSummaries().get(0);
    assertEquals(Long.valueOf(0), service.getPutCode());
    assertEquals(Visibility.PRIVATE, service.getVisibility());
    assertEquals("service:department-name", service.getDepartmentName());
    assertEquals("service:role-title", service.getRoleTitle());
    assertNotNull(service.getEndDate());
    assertEquals("02", service.getEndDate().getDay().getValue());
    assertEquals("02", service.getEndDate().getMonth().getValue());
    assertEquals("1848", service.getEndDate().getYear().getValue());
    assertNotNull(service.getStartDate());
    assertEquals("02", service.getStartDate().getDay().getValue());
    assertEquals("02", service.getStartDate().getMonth().getValue());
    assertEquals("1848", service.getStartDate().getYear().getValue());
    assertNotNull(service.getOrganization());
    assertEquals("common:name", service.getOrganization().getName());
    assertEquals("common:city", service.getOrganization().getAddress().getCity());
    assertEquals("common:region", service.getOrganization().getAddress().getRegion());
    assertEquals(Iso3166Country.AF, service.getOrganization().getAddress().getCountry());
    assertNotNull(activities.getWorks());
    Works works = activities.getWorks();
    assertNotNull(works.getLastModifiedDate());
    assertEquals(1, works.getWorkGroup().size());
    assertNotNull(works.getWorkGroup().get(0).getIdentifiers());
    assertEquals(1, works.getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().size());
    assertEquals(Relationship.PART_OF, works.getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getRelationship());
    assertEquals("agr", works.getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getType());
    assertEquals("http://orcid.org", works.getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getUrl().getValue());
    assertEquals("external-id-value", works.getWorkGroup().get(0).getIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(1, works.getWorkGroup().get(0).getWorkSummary().size());
    WorkSummary work = works.getWorkGroup().get(0).getWorkSummary().get(0);
    assertEquals(Long.valueOf(0), work.getPutCode());
    assertEquals(Visibility.PRIVATE, work.getVisibility());
    assertNotNull(work.getTitle());
    assertEquals("common:title", work.getTitle().getTitle().getContent());
    assertEquals("common:translated-title", work.getTitle().getTranslatedTitle().getContent());
    assertEquals("en", work.getTitle().getTranslatedTitle().getLanguageCode());
    assertNotNull(work.getExternalIdentifiers());
    assertEquals(1, work.getExternalIdentifiers().getExternalIdentifier().size());
    assertEquals(Relationship.SELF, work.getExternalIdentifiers().getExternalIdentifier().get(0).getRelationship());
    assertEquals("agr", work.getExternalIdentifiers().getExternalIdentifier().get(0).getType());
    assertEquals("http://tempuri.org", work.getExternalIdentifiers().getExternalIdentifier().get(0).getUrl().getValue());
    assertEquals("external-id-value", work.getExternalIdentifiers().getExternalIdentifier().get(0).getValue());
    assertEquals(WorkType.ARTISTIC_PERFORMANCE, work.getType());
    assertNotNull(work.getPublicationDate());
    assertEquals("02", work.getPublicationDate().getDay().getValue());
    assertEquals("02", work.getPublicationDate().getMonth().getValue());
    assertEquals("1848", work.getPublicationDate().getYear().getValue());
    // Check biography
    Person person = record.getPerson();
    assertNotNull(person);
    assertNotNull(person.getLastModifiedDate().getValue());
    assertNotNull(person.getAddresses());
    assertNotNull(person.getAddresses().getLastModifiedDate());
    assertEquals(1, person.getAddresses().getAddress().size());
    Address address = person.getAddresses().getAddress().get(0);
    assertEquals(Long.valueOf(1), address.getPutCode());
    assertEquals(Visibility.PUBLIC, address.getVisibility());
    assertEquals(Iso3166Country.US, address.getCountry().getValue());
    assertEquals(Long.valueOf(0), address.getDisplayIndex());
    assertNotNull(address.getLastModifiedDate());
    assertNotNull(person.getBiography());
    assertEquals(Visibility.PUBLIC, person.getBiography().getVisibility());
    assertEquals("biography", person.getBiography().getContent());
    assertNotNull(person.getEmails());
    assertTrue(StringUtils.isNotBlank(person.getEmails().getPath()));
    assertNotNull(person.getEmails().getLastModifiedDate());
    assertNotNull(person.getEmails().getEmails());
    assertEquals(1, person.getEmails().getEmails().size());
    Email email = person.getEmails().getEmails().get(0);
    assertNotNull(email.getCreatedDate().getValue());
    assertEquals("user1@email.com", email.getEmail());
    assertNotNull(email.getLastModifiedDate().getValue());
    assertEquals(Long.valueOf(0), email.getPutCode());
    assertNotNull(email.getSource());
    assertEquals(Visibility.PUBLIC, email.getVisibility());
    assertNotNull(person.getExternalIdentifiers());
    assertTrue(StringUtils.isNotBlank(person.getExternalIdentifiers().getPath()));
    assertNotNull(person.getExternalIdentifiers().getLastModifiedDate().getValue());
    assertNotNull(person.getExternalIdentifiers().getExternalIdentifiers());
    assertEquals(1, person.getExternalIdentifiers().getExternalIdentifiers().size());
    PersonExternalIdentifier extId = person.getExternalIdentifiers().getExternalIdentifiers().get(0);
    assertNotNull(extId.getCreatedDate().getValue());
    assertNotNull(extId.getLastModifiedDate());
    assertEquals(Long.valueOf(0), extId.getDisplayIndex());
    assertEquals(Long.valueOf(1), extId.getPutCode());
    assertEquals(Relationship.PART_OF, extId.getRelationship());
    assertNotNull(extId.getSource());
    assertEquals("type-1", extId.getType());
    assertEquals("http://url.com/1", extId.getUrl().getValue());
    assertEquals("value-1", extId.getValue());
    assertEquals(Visibility.PUBLIC, extId.getVisibility());
    assertNotNull(person.getKeywords());
    assertTrue(StringUtils.isNotBlank(person.getKeywords().getPath()));
    assertNotNull(person.getKeywords().getLastModifiedDate().getValue());
    assertNotNull(person.getKeywords().getKeywords());
    assertEquals(1, person.getKeywords().getKeywords().size());
    Keyword keyword = person.getKeywords().getKeywords().get(0);
    assertEquals("keyword1", keyword.getContent());
    assertNotNull(keyword.getCreatedDate().getValue());
    assertNotNull(keyword.getLastModifiedDate().getValue());
    assertEquals(Long.valueOf(0), keyword.getDisplayIndex());
    assertEquals(Long.valueOf(1), keyword.getPutCode());
    assertNotNull(keyword.getSource());
    assertEquals(Visibility.PUBLIC, keyword.getVisibility());
    assertNotNull(person.getOtherNames());
    assertTrue(StringUtils.isNotBlank(person.getOtherNames().getPath()));
    assertNotNull(person.getOtherNames().getLastModifiedDate().getValue());
    assertNotNull(person.getOtherNames().getOtherNames());
    assertEquals(1, person.getOtherNames().getOtherNames().size());
    OtherName otherName = person.getOtherNames().getOtherNames().get(0);
    assertEquals("other-name-1", otherName.getContent());
    assertNotNull(otherName.getCreatedDate().getValue());
    assertNotNull(otherName.getLastModifiedDate().getValue());
    assertEquals(Long.valueOf(0), otherName.getDisplayIndex());
    assertEquals(Long.valueOf(1), otherName.getPutCode());
    assertNotNull(otherName.getSource());
    assertEquals(Visibility.PUBLIC, otherName.getVisibility());
    assertNotNull(person.getResearcherUrls());
    assertTrue(StringUtils.isNotBlank(person.getResearcherUrls().getPath()));
    assertNotNull(person.getResearcherUrls().getLastModifiedDate().getValue());
    assertNotNull(person.getResearcherUrls().getResearcherUrls().size());
    ResearcherUrl rUrl = person.getResearcherUrls().getResearcherUrls().get(0);
    assertNotNull(rUrl.getCreatedDate().getValue());
    assertEquals(Long.valueOf(0), rUrl.getDisplayIndex());
    assertNotNull(rUrl.getLastModifiedDate().getValue());
    assertEquals(Long.valueOf(1248), rUrl.getPutCode());
    assertNotNull(rUrl.getSource());
    assertEquals("http://url.com/", rUrl.getUrl().getValue());
    assertEquals("url-name-1", rUrl.getUrlName());
    assertEquals(Visibility.PUBLIC, rUrl.getVisibility());
    assertNotNull(person.getName());
    Name name = person.getName();
    assertTrue(StringUtils.isNotBlank(name.getPath()));
    assertEquals("credit-name", name.getCreditName().getContent());
    assertEquals("family-name", name.getFamilyName().getContent());
    assertEquals("give-names", name.getGivenNames().getContent());
    assertNotNull(name.getLastModifiedDate().getValue());
    assertEquals(Visibility.PUBLIC, name.getVisibility());
}
Also used : Memberships(org.orcid.jaxb.model.v3.dev1.record.summary.Memberships) Email(org.orcid.jaxb.model.v3.dev1.record.Email) Address(org.orcid.jaxb.model.v3.dev1.record.Address) Fundings(org.orcid.jaxb.model.v3.dev1.record.summary.Fundings) Distinctions(org.orcid.jaxb.model.v3.dev1.record.summary.Distinctions) ActivitiesSummary(org.orcid.jaxb.model.v3.dev1.record.summary.ActivitiesSummary) CreditName(org.orcid.jaxb.model.v3.dev1.record.CreditName) OtherName(org.orcid.jaxb.model.v3.dev1.record.OtherName) Name(org.orcid.jaxb.model.v3.dev1.record.Name) WorkSummary(org.orcid.jaxb.model.v3.dev1.record.summary.WorkSummary) FundingSummary(org.orcid.jaxb.model.v3.dev1.record.summary.FundingSummary) DistinctionSummary(org.orcid.jaxb.model.v3.dev1.record.summary.DistinctionSummary) Record(org.orcid.jaxb.model.v3.dev1.record.Record) ResearcherUrl(org.orcid.jaxb.model.v3.dev1.record.ResearcherUrl) Works(org.orcid.jaxb.model.v3.dev1.record.summary.Works) ServiceSummary(org.orcid.jaxb.model.v3.dev1.record.summary.ServiceSummary) Keyword(org.orcid.jaxb.model.v3.dev1.record.Keyword) OtherName(org.orcid.jaxb.model.v3.dev1.record.OtherName) PersonExternalIdentifier(org.orcid.jaxb.model.v3.dev1.record.PersonExternalIdentifier) Employments(org.orcid.jaxb.model.v3.dev1.record.summary.Employments) Services(org.orcid.jaxb.model.v3.dev1.record.summary.Services) InvitedPositionSummary(org.orcid.jaxb.model.v3.dev1.record.summary.InvitedPositionSummary) QualificationSummary(org.orcid.jaxb.model.v3.dev1.record.summary.QualificationSummary) EducationSummary(org.orcid.jaxb.model.v3.dev1.record.summary.EducationSummary) Educations(org.orcid.jaxb.model.v3.dev1.record.summary.Educations) EmploymentSummary(org.orcid.jaxb.model.v3.dev1.record.summary.EmploymentSummary) InvitedPositions(org.orcid.jaxb.model.v3.dev1.record.summary.InvitedPositions) MembershipSummary(org.orcid.jaxb.model.v3.dev1.record.summary.MembershipSummary) Person(org.orcid.jaxb.model.v3.dev1.record.Person) Qualifications(org.orcid.jaxb.model.v3.dev1.record.summary.Qualifications) Test(org.junit.Test)

Aggregations

Test (org.junit.Test)154 Work (org.orcid.jaxb.model.v3.dev1.record.Work)141 ExternalID (org.orcid.jaxb.model.v3.dev1.record.ExternalID)46 DBUnitTest (org.orcid.test.DBUnitTest)41 Response (javax.ws.rs.core.Response)39 Title (org.orcid.jaxb.model.v3.dev1.common.Title)29 WorkTitle (org.orcid.jaxb.model.v3.dev1.record.WorkTitle)29 WorkSummary (org.orcid.jaxb.model.v3.dev1.record.summary.WorkSummary)29 Url (org.orcid.jaxb.model.v3.dev1.common.Url)28 ExternalIDs (org.orcid.jaxb.model.v3.dev1.record.ExternalIDs)24 WorkBulk (org.orcid.jaxb.model.v3.dev1.record.WorkBulk)22 OrcidError (org.orcid.jaxb.model.v3.dev1.error.OrcidError)21 BaseTest (org.orcid.core.BaseTest)20 NoResultException (javax.persistence.NoResultException)17 OrcidAccessControlException (org.orcid.core.exception.OrcidAccessControlException)17 OrcidUnauthorizedException (org.orcid.core.exception.OrcidUnauthorizedException)17 OrcidVisibilityException (org.orcid.core.exception.OrcidVisibilityException)17 VisibilityMismatchException (org.orcid.core.exception.VisibilityMismatchException)17 WrongSourceException (org.orcid.core.exception.WrongSourceException)17 SourceEntity (org.orcid.persistence.jpa.entities.SourceEntity)15