Examples with SourceEntity org.orcid.persistence.jpa.entities.SourceEntity used on opensource projects

Example 96 with SourceEntity

use of org.orcid.persistence.jpa.entities.SourceEntity in project ORCID-Source by ORCID.

the class ExternalIdentifierManagerImpl method createExternalIdentifier.

@Override
public PersonExternalIdentifier createExternalIdentifier(String orcid, PersonExternalIdentifier externalIdentifier, boolean isApiRequest) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    // Validate external identifier
    PersonValidator.validateExternalIdentifier(externalIdentifier, sourceEntity, true, isApiRequest, null, requireRelationshipOnExternalIdentifier);
    // Validate it is not duplicated
    List<ExternalIdentifierEntity> existingExternalIdentifiers = externalIdentifierDao.getExternalIdentifiers(orcid, getLastModified(orcid));
    for (ExternalIdentifierEntity existing : existingExternalIdentifiers) {
        if (isDuplicated(existing, externalIdentifier, sourceEntity)) {
            Map<String, String> params = new HashMap<String, String>();
            params.put("type", "external-identifier");
            params.put("value", externalIdentifier.getUrl().getValue());
            throw new OrcidDuplicatedElementException(params);
        }
    }
    ExternalIdentifierEntity newEntity = jpaJaxbExternalIdentifierAdapter.toExternalIdentifierEntity(externalIdentifier);
    ProfileEntity profile = profileEntityCacheManager.retrieve(orcid);
    newEntity.setOwner(profile);
    newEntity.setDateCreated(new Date());
    if (sourceEntity.getSourceProfile() != null) {
        newEntity.setSourceId(sourceEntity.getSourceProfile().getId());
    }
    if (sourceEntity.getSourceClient() != null) {
        newEntity.setClientSourceId(sourceEntity.getSourceClient().getId());
    }
    setIncomingPrivacy(newEntity, profile);
    DisplayIndexCalculatorHelper.setDisplayIndexOnNewEntity(newEntity, isApiRequest);
    externalIdentifierDao.persist(newEntity);
    return jpaJaxbExternalIdentifierAdapter.toExternalIdentifier(newEntity);
}

Example 97 with SourceEntity

use of org.orcid.persistence.jpa.entities.SourceEntity in project ORCID-Source by ORCID.

the class AffiliationsManagerImpl method createEmploymentAffiliation.

/**
     * Add a new employment to the given user
     * 
     * @param orcid
     *            The user to add the employment
     * @param employment
     *            The employment to add
     * @return the added employment
     * */
@Override
public Employment createEmploymentAffiliation(String orcid, Employment employment, boolean isApiRequest) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    activityValidator.validateEmployment(employment, sourceEntity, true, isApiRequest, null);
    OrgAffiliationRelationEntity employmentEntity = jpaJaxbEmploymentAdapter.toOrgAffiliationRelationEntity(employment);
    // Updates the give organization with the latest organization from
    // database
    OrgEntity updatedOrganization = orgManager.getOrgEntity(employment);
    employmentEntity.setOrg(updatedOrganization);
    // Set source id 
    if (sourceEntity.getSourceProfile() != null) {
        employmentEntity.setSourceId(sourceEntity.getSourceProfile().getId());
    }
    if (sourceEntity.getSourceClient() != null) {
        employmentEntity.setClientSourceId(sourceEntity.getSourceClient().getId());
    }
    ProfileEntity profile = profileEntityCacheManager.retrieve(orcid);
    employmentEntity.setProfile(profile);
    setIncomingWorkPrivacy(employmentEntity, profile);
    employmentEntity.setAffiliationType(AffiliationType.EMPLOYMENT);
    orgAffiliationRelationDao.persist(employmentEntity);
    orgAffiliationRelationDao.flush();
    notificationManager.sendAmendEmail(orcid, AmendedSection.EMPLOYMENT, createItem(employmentEntity));
    return jpaJaxbEmploymentAdapter.toEmployment(employmentEntity);
}

Example 98 with SourceEntity

use of org.orcid.persistence.jpa.entities.SourceEntity in project ORCID-Source by ORCID.

the class AffiliationsManagerImpl method createEducationAffiliation.

/**
     * Add a new education to the given user
     * 
     * @param orcid
     *            The user to add the education
     * @param education
     *            The education to add
     * @return the added education
     * */
@Override
public Education createEducationAffiliation(String orcid, Education education, boolean isApiRequest) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    activityValidator.validateEducation(education, sourceEntity, true, isApiRequest, null);
    OrgAffiliationRelationEntity educationEntity = jpaJaxbEducationAdapter.toOrgAffiliationRelationEntity(education);
    // Updates the give organization with the latest organization from
    // database
    OrgEntity updatedOrganization = orgManager.getOrgEntity(education);
    educationEntity.setOrg(updatedOrganization);
    // Set source id 
    if (sourceEntity.getSourceProfile() != null) {
        educationEntity.setSourceId(sourceEntity.getSourceProfile().getId());
    }
    if (sourceEntity.getSourceClient() != null) {
        educationEntity.setClientSourceId(sourceEntity.getSourceClient().getId());
    }
    ProfileEntity profile = profileEntityCacheManager.retrieve(orcid);
    educationEntity.setProfile(profile);
    setIncomingWorkPrivacy(educationEntity, profile);
    educationEntity.setAffiliationType(AffiliationType.EDUCATION);
    orgAffiliationRelationDao.persist(educationEntity);
    orgAffiliationRelationDao.flush();
    notificationManager.sendAmendEmail(orcid, AmendedSection.EDUCATION, createItem(educationEntity));
    return jpaJaxbEducationAdapter.toEducation(educationEntity);
}

Example 99 with SourceEntity

use of org.orcid.persistence.jpa.entities.SourceEntity in project ORCID-Source by ORCID.

the class EmailManagerImpl method addEmail.

@Override
@Transactional
public void addEmail(HttpServletRequest request, String orcid, Email email) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    String sourceId = sourceEntity.getSourceProfile() == null ? null : sourceEntity.getSourceProfile().getId();
    String clientSourceId = sourceEntity.getSourceClient() == null ? null : sourceEntity.getSourceClient().getId();
    Email currentPrimaryEmail = findPrimaryEmail(orcid);
    // Create the new email
    emailDao.addEmail(orcid, email.getEmail(), email.getVisibility(), sourceId, clientSourceId);
    // if primary email changed send notification.
    if (email.isPrimary() && !StringUtils.equals(currentPrimaryEmail.getEmail(), email.getEmail())) {
        request.getSession().setAttribute(EmailConstants.CHECK_EMAIL_VALIDATED, false);
        notificationManager.sendEmailAddressChangedNotification(orcid, email.getEmail(), currentPrimaryEmail.getEmail());
    }
    // send verifcation email for new address
    notificationManager.sendVerificationEmail(orcid, email.getEmail());
}

Example 100 with SourceEntity

use of org.orcid.persistence.jpa.entities.SourceEntity in project ORCID-Source by ORCID.

the class GroupIdRecordManagerImpl method createGroupIdRecord.

@Override
public GroupIdRecord createGroupIdRecord(GroupIdRecord groupIdRecord) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    activityValidator.validateGroupIdRecord(groupIdRecord, true, sourceEntity);
    validateDuplicate(groupIdRecord);
    GroupIdRecordEntity entity = jpaJaxbGroupIdRecordAdapter.toGroupIdRecordEntity(groupIdRecord);
    if (sourceEntity != null) {
        if (sourceEntity.getSourceClient() != null) {
            entity.setClientSourceId(sourceEntity.getSourceClient().getClientId());
        } else if (sourceEntity.getSourceProfile() != null) {
            entity.setSourceId(sourceEntity.getSourceProfile().getId());
        }
    }
    groupIdRecordDao.persist(entity);
    return jpaJaxbGroupIdRecordAdapter.toGroupIdRecord(entity);
}