Examples with WorkEntity org.orcid.persistence.jpa.entities.WorkEntity used on opensource projects

Example 6 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class WorkManagerTest method displayIndexIsSetTo_0_FromAPI.

@Test
public void displayIndexIsSetTo_0_FromAPI() {
    when(sourceManager.retrieveSourceEntity()).thenReturn(new SourceEntity(new ClientDetailsEntity(CLIENT_1_ID)));
    Work w1 = getWork("fromAPI-1");
    w1 = workManager.createWork(claimedOrcid, w1, true);
    WorkEntity w = workDao.find(w1.getPutCode());
    assertNotNull(w1);
    assertEquals(Long.valueOf(0), w.getDisplayIndex());
}

Example 7 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class MapperFacadeFactory method getWorkMapperFacade.

public MapperFacade getWorkMapperFacade() {
    MapperFactory mapperFactory = new DefaultMapperFactory.Builder().build();
    ConverterFactory converterFactory = mapperFactory.getConverterFactory();
    converterFactory.registerConverter("workExternalIdentifiersConverterId", new WorkExternalIDsConverter());
    converterFactory.registerConverter("workContributorsConverterId", new JsonOrikaConverter<WorkContributors>());
    ClassMapBuilder<Work, WorkEntity> workClassMap = mapperFactory.classMap(Work.class, WorkEntity.class);
    workClassMap.byDefault();
    workClassMap.field("putCode", "id");
    addV2DateFields(workClassMap);
    registerSourceConverters(mapperFactory, workClassMap);
    workClassMap.field("journalTitle.content", "journalTitle");
    workClassMap.field("workTitle.title.content", "title");
    workClassMap.field("workTitle.translatedTitle.content", "translatedTitle");
    workClassMap.field("workTitle.translatedTitle.languageCode", "translatedTitleLanguageCode");
    workClassMap.field("workTitle.subtitle.content", "subtitle");
    workClassMap.field("shortDescription", "description");
    workClassMap.field("workCitation.workCitationType", "citationType");
    workClassMap.field("workCitation.citation", "citation");
    workClassMap.field("workType", "workType");
    workClassMap.field("publicationDate", "publicationDate");
    workClassMap.fieldMap("workExternalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    workClassMap.field("url.value", "workUrl");
    workClassMap.fieldMap("workContributors", "contributorsJson").converter("workContributorsConverterId").add();
    workClassMap.field("languageCode", "languageCode");
    workClassMap.field("country.value", "iso2Country");
    workClassMap.register();
    ClassMapBuilder<WorkSummary, WorkEntity> workSummaryClassMap = mapperFactory.classMap(WorkSummary.class, WorkEntity.class);
    registerSourceConverters(mapperFactory, workSummaryClassMap);
    workSummaryClassMap.field("putCode", "id");
    workSummaryClassMap.field("title.title.content", "title");
    workSummaryClassMap.field("title.translatedTitle.content", "translatedTitle");
    workSummaryClassMap.field("title.translatedTitle.languageCode", "translatedTitleLanguageCode");
    workSummaryClassMap.field("type", "workType");
    workSummaryClassMap.field("publicationDate", "publicationDate");
    workSummaryClassMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    workSummaryClassMap.byDefault();
    workSummaryClassMap.register();
    ClassMapBuilder<WorkSummary, MinimizedWorkEntity> workSummaryMinimizedClassMap = mapperFactory.classMap(WorkSummary.class, MinimizedWorkEntity.class);
    addV2CommonFields(workSummaryMinimizedClassMap);
    registerSourceConverters(mapperFactory, workSummaryMinimizedClassMap);
    workSummaryMinimizedClassMap.field("title.title.content", "title");
    workSummaryMinimizedClassMap.field("title.translatedTitle.content", "translatedTitle");
    workSummaryMinimizedClassMap.field("title.translatedTitle.languageCode", "translatedTitleLanguageCode");
    workSummaryMinimizedClassMap.field("type", "workType");
    workSummaryMinimizedClassMap.field("publicationDate.year.value", "publicationYear");
    workSummaryMinimizedClassMap.field("publicationDate.month.value", "publicationMonth");
    workSummaryMinimizedClassMap.field("publicationDate.day.value", "publicationDay");
    workSummaryMinimizedClassMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    workSummaryMinimizedClassMap.byDefault();
    workSummaryMinimizedClassMap.register();
    ClassMapBuilder<Work, MinimizedWorkEntity> minimizedWorkClassMap = mapperFactory.classMap(Work.class, MinimizedWorkEntity.class);
    minimizedWorkClassMap.byDefault();
    registerSourceConverters(mapperFactory, minimizedWorkClassMap);
    minimizedWorkClassMap.field("putCode", "id");
    minimizedWorkClassMap.field("journalTitle.content", "journalTitle");
    minimizedWorkClassMap.field("workTitle.title.content", "title");
    minimizedWorkClassMap.field("workTitle.translatedTitle.content", "translatedTitle");
    minimizedWorkClassMap.field("workTitle.translatedTitle.languageCode", "translatedTitleLanguageCode");
    minimizedWorkClassMap.field("workTitle.subtitle.content", "subtitle");
    minimizedWorkClassMap.field("shortDescription", "description");
    minimizedWorkClassMap.field("workType", "workType");
    minimizedWorkClassMap.field("publicationDate.year.value", "publicationYear");
    minimizedWorkClassMap.field("publicationDate.month.value", "publicationMonth");
    minimizedWorkClassMap.field("publicationDate.day.value", "publicationDay");
    minimizedWorkClassMap.fieldMap("workExternalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    minimizedWorkClassMap.field("url.value", "workUrl");
    minimizedWorkClassMap.register();
    mapperFactory.classMap(PublicationDate.class, PublicationDateEntity.class).field("year.value", "year").field("month.value", "month").field("day.value", "day").register();
    return mapperFactory.getMapperFacade();
}

Example 8 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class WorkManagerImpl method updateWork.

@Override
@Transactional
public Work updateWork(String orcid, Work work, boolean isApiRequest) {
    WorkEntity workEntity = workDao.getWork(orcid, work.getPutCode());
    Visibility originalVisibility = workEntity.getVisibility();
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    //Save the original source
    String existingSourceId = workEntity.getSourceId();
    String existingClientSourceId = workEntity.getClientSourceId();
    if (isApiRequest) {
        activityValidator.validateWork(work, sourceEntity, false, isApiRequest, workEntity.getVisibility());
        long lastModifiedTime = getLastModified(orcid);
        List<Work> existingWorks = this.findWorks(orcid, lastModifiedTime);
        for (Work existing : existingWorks) {
            // Dont compare the updated peer review with the DB version
            if (!existing.getPutCode().equals(work.getPutCode())) {
                activityValidator.checkExternalIdentifiersForDuplicates(work.getExternalIdentifiers(), existing.getExternalIdentifiers(), existing.getSource(), sourceEntity);
            }
        }
    } else {
        //validate external ID vocab
        externalIDValidator.validateWorkOrPeerReview(work.getExternalIdentifiers());
    }
    orcidSecurityManager.checkSource(workEntity);
    jpaJaxbWorkAdapter.toWorkEntity(work, workEntity);
    workEntity.setVisibility(originalVisibility);
    //Be sure it doesn't overwrite the source
    workEntity.setSourceId(existingSourceId);
    workEntity.setClientSourceId(existingClientSourceId);
    workDao.merge(workEntity);
    workDao.flush();
    notificationManager.sendAmendEmail(orcid, AmendedSection.WORK, createItem(workEntity));
    return jpaJaxbWorkAdapter.toWork(workEntity);
}

Example 9 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class WorkManagerImpl method createWork.

@Override
@Transactional
public Work createWork(String orcid, Work work, boolean isApiRequest) {
    SourceEntity sourceEntity = sourceManager.retrieveSourceEntity();
    if (isApiRequest) {
        activityValidator.validateWork(work, sourceEntity, true, isApiRequest, null);
        // duplicates
        if (!sourceEntity.getSourceId().equals(orcid)) {
            long lastModifiedTime = getLastModified(orcid);
            List<Work> existingWorks = this.findWorks(orcid, lastModifiedTime);
            if (existingWorks != null) {
                for (Work existing : existingWorks) {
                    activityValidator.checkExternalIdentifiersForDuplicates(work.getExternalIdentifiers(), existing.getExternalIdentifiers(), existing.getSource(), sourceEntity);
                }
            }
        }
    } else {
        // validate external ID vocab
        externalIDValidator.validateWorkOrPeerReview(work.getExternalIdentifiers());
    }
    WorkEntity workEntity = jpaJaxbWorkAdapter.toWorkEntity(work);
    ProfileEntity profile = profileEntityCacheManager.retrieve(orcid);
    workEntity.setProfile(profile);
    workEntity.setAddedToProfileDate(new Date());
    // Set source id 
    if (sourceEntity.getSourceProfile() != null) {
        workEntity.setSourceId(sourceEntity.getSourceProfile().getId());
    }
    if (sourceEntity.getSourceClient() != null) {
        workEntity.setClientSourceId(sourceEntity.getSourceClient().getId());
    }
    setIncomingWorkPrivacy(workEntity, profile);
    DisplayIndexCalculatorHelper.setDisplayIndexOnNewEntity(workEntity, isApiRequest);
    workDao.persist(workEntity);
    workDao.flush();
    notificationManager.sendAmendEmail(orcid, AmendedSection.WORK, createItem(workEntity));
    return jpaJaxbWorkAdapter.toWork(workEntity);
}

Example 10 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class JpaJaxbWorkAdapterTest method fromProfileWorkEntityToWorkSummaryTest.

@Test
public void fromProfileWorkEntityToWorkSummaryTest() {
    WorkEntity work = getWorkEntity();
    assertNotNull(work);
    WorkSummary ws = jpaJaxbWorkAdapter.toWorkSummary(work);
    assertNotNull(ws);
    assertEquals(Long.valueOf(12345), ws.getPutCode());
    assertEquals(Visibility.LIMITED.value(), ws.getVisibility().value());
    assertEquals("1234567890", ws.getDisplayIndex());
    assertNotNull(ws.getExternalIdentifiers());
    assertNotNull(ws.getExternalIdentifiers().getExternalIdentifier());
    assertEquals(1, ws.getExternalIdentifiers().getExternalIdentifier().size());
    ExternalID workExtId = ws.getExternalIdentifiers().getExternalIdentifier().get(0);
    assertNotNull(workExtId.getValue());
    assertEquals("123", workExtId.getValue());
    assertNotNull(workExtId.getType());
    assertEquals(org.orcid.jaxb.model.message.WorkExternalIdentifierType.AGR.value(), workExtId.getType());
}