Examples with WorkEntity org.orcid.persistence.jpa.entities.WorkEntity used on opensource projects

Example 36 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class JpaJaxbEntityAdapterToProfileEntityTest method testReligiousTextConvertedFromBible.

@Test
@Transactional(propagation = Propagation.REQUIRES_NEW)
@Rollback(true)
public void testReligiousTextConvertedFromBible() throws Exception {
    OrcidMessage orcidMessage = getOrcidMessage(ORCID_INTERNAL_FULL_XML);
    List<OrcidWork> currentOrcidWorks = orcidMessage.getOrcidProfile().getOrcidActivities().getOrcidWorks().getOrcidWork();
    assertTrue(currentOrcidWorks.size() == 1);
    currentOrcidWorks.get(0).setWorkType(WorkType.DATA_SET);
    ProfileEntity profileEntity = adapter.toProfileEntity(orcidMessage.getOrcidProfile());
    List<WorkEntity> works = new ArrayList<WorkEntity>(profileEntity.getWorks());
    assertEquals(1, works.size());
    assertTrue(works.get(0).getWorkType().equals(org.orcid.jaxb.model.record_v2.WorkType.DATA_SET));
}

Example 37 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class WorkEntityFactory method create.

@Override
public NotificationWorkEntity create(Object source, MappingContext mappingContext) {
    mappingContext.getSourceObjects();
    NotificationWorkEntity nwe = new NotificationWorkEntity();
    String putCode = ((Item) source).getPutCode();
    if (putCode != null) {
        WorkEntity work = workDao.find(Long.valueOf(putCode));
        nwe.setWork(work);
    }
    return nwe;
}

Example 38 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class WorkDaoImpl method editWork.

@Override
@Transactional
public WorkEntity editWork(WorkEntity updatedWork) {
    WorkEntity workToUpdate = this.find(updatedWork.getId());
    mergeWork(workToUpdate, updatedWork);
    workToUpdate = this.merge(workToUpdate);
    return workToUpdate;
}

Example 39 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class DeleteWorkByIdentifier method deleteAll.

private void deleteAll(File orcidsToDelete) {
    GenericDao<WorkEntity, Long> workDao = createWorkDao();
    FileInputStream fis = null;
    try {
        fis = new FileInputStream(orcidsToDelete);
    } catch (FileNotFoundException e) {
        if (!orcidsToDelete.exists()) {
            System.err.println("Input file does not exist: " + orcidsToDelete);
            return;
        }
        if (!orcidsToDelete.canRead()) {
            System.err.println("Input exists, but can't read: " + orcidsToDelete);
            return;
        }
        System.err.println("Unable to read input file: " + orcidsToDelete + "\n" + e);
        return;
    }
    try {
        BufferedReader br = new BufferedReader(new InputStreamReader(fis));
        String line = null;
        try {
            while ((line = br.readLine()) != null) {
                workDao.remove(Long.valueOf(line.trim()));
            }
        } catch (IOException e) {
            throw new RuntimeException("Error reading from: " + orcidsToDelete, e);
        }
        br.close();
    } catch (IOException e) {
        System.err.println("IOException " + e.getMessage());
    } finally {
        IOUtils.closeQuietly(fis);
    }
}

Example 40 with WorkEntity

use of org.orcid.persistence.jpa.entities.WorkEntity in project ORCID-Source by ORCID.

the class WorkManagerReadOnlyImpl method findWorkBulk.

@Override
public WorkBulk findWorkBulk(String orcid, String putCodesAsString, long profileLastModified) {
    List<BulkElement> works = new ArrayList<>();
    String[] putCodes = getPutCodeArray(putCodesAsString);
    for (String putCode : putCodes) {
        try {
            Long id = Long.valueOf(putCode);
            WorkEntity workEntity = workEntityCacheManager.retrieveFullWork(orcid, id, profileLastModified);
            works.add(jpaJaxbWorkAdapter.toWork(workEntity));
        } catch (Exception e) {
            works.add(orcidCoreExceptionMapper.getOrcidError(new PutCodeFormatException("'" + putCode + "' is not a valid put code")));
        }
    }
    WorkBulk bulk = new WorkBulk();
    bulk.setBulk(works);
    return bulk;
}