Examples with PageRequest org.pmiops.workbench.cohortreview.util.PageRequest used on opensource projects

Example 11 with PageRequest

use of org.pmiops.workbench.cohortreview.util.PageRequest in project workbench by all-of-us.

the class ParticipantCohortStatusDaoTest method findAllNoMatchingConcept.

@Test
public void findAllNoMatchingConcept() throws Exception {
    jdbcTemplate.execute("delete from concept");
    PageRequest pageRequest = new PageRequest(page, pageSize, SortOrder.ASC, ParticipantCohortStatusColumns.PARTICIPANTID.toString());
    List<ParticipantCohortStatus> results = participantCohortStatusDao.findAll(1L, Collections.<Filter>emptyList(), pageRequest);
    assertEquals(2, results.size());
}

Example 12 with PageRequest

use of org.pmiops.workbench.cohortreview.util.PageRequest in project workbench by all-of-us.

the class ParticipantCohortStatusDaoTest method findAllParticipantIdSorting.

@Test
public void findAllParticipantIdSorting() throws Exception {
    PageRequest pageRequest = new PageRequest(page, 2, SortOrder.ASC, ParticipantCohortStatusColumns.PARTICIPANTID.toString());
    List<ParticipantCohortStatus> results = participantCohortStatusDao.findAll(1L, Collections.<Filter>emptyList(), pageRequest);
    assertEquals(2, results.size());
    ParticipantCohortStatus expectedPCS1 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(1), CohortStatus.INCLUDED);
    expectedPCS1.setBirthDate(results.get(0).getBirthDate());
    ParticipantCohortStatus expectedPCS2 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(2), CohortStatus.EXCLUDED);
    expectedPCS2.setBirthDate(results.get(1).getBirthDate());
    assertEquals(expectedPCS1, results.get(0));
    assertEquals(expectedPCS2, results.get(1));
    pageRequest = new PageRequest(page, 2, SortOrder.DESC, ParticipantCohortStatusColumns.PARTICIPANTID.toString());
    results = participantCohortStatusDao.findAll(1L, Collections.<Filter>emptyList(), pageRequest);
    assertEquals(2, results.size());
    expectedPCS1 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(2), CohortStatus.EXCLUDED);
    expectedPCS1.setBirthDate(results.get(0).getBirthDate());
    expectedPCS2 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(1), CohortStatus.INCLUDED);
    expectedPCS2.setBirthDate(results.get(1).getBirthDate());
    assertEquals(expectedPCS1, results.get(0));
    assertEquals(expectedPCS2, results.get(1));
}

Example 13 with PageRequest

use of org.pmiops.workbench.cohortreview.util.PageRequest in project workbench by all-of-us.

the class ParticipantCohortStatusDaoTest method findAllStatusSorting.

@Test
public void findAllStatusSorting() throws Exception {
    PageRequest pageRequest = new PageRequest(page, 2, SortOrder.ASC, ParticipantCohortStatusColumns.STATUS.toString());
    List<ParticipantCohortStatus> results = participantCohortStatusDao.findAll(1L, Collections.<Filter>emptyList(), pageRequest);
    assertEquals(2, results.size());
    ParticipantCohortStatus expectedPCS1 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(2), CohortStatus.EXCLUDED);
    expectedPCS1.setBirthDate(results.get(0).getBirthDate());
    ParticipantCohortStatus expectedPCS2 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(1), CohortStatus.INCLUDED);
    expectedPCS2.setBirthDate(results.get(1).getBirthDate());
    assertEquals(expectedPCS1, results.get(0));
    assertEquals(expectedPCS2, results.get(1));
    pageRequest = new PageRequest(page, 2, SortOrder.DESC, ParticipantCohortStatusColumns.STATUS.toString());
    results = participantCohortStatusDao.findAll(1L, Collections.<Filter>emptyList(), pageRequest);
    assertEquals(2, results.size());
    expectedPCS1 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(1), CohortStatus.INCLUDED);
    expectedPCS1.setBirthDate(results.get(0).getBirthDate());
    expectedPCS2 = createExpectedPCSWithConceptValues(new ParticipantCohortStatusKey().cohortReviewId(COHORT_REVIEW_ID).participantId(2), CohortStatus.EXCLUDED);
    expectedPCS2.setBirthDate(results.get(1).getBirthDate());
    assertEquals(expectedPCS1, results.get(0));
    assertEquals(expectedPCS2, results.get(1));
}

Example 14 with PageRequest

use of org.pmiops.workbench.cohortreview.util.PageRequest in project workbench by all-of-us.

the class CohortReviewController method getParticipantCohortStatuses.

/**
 * Get all participants for the specified cohortId and cdrVersionId. This endpoint does pagination
 * based on page, pageSize, sortOrder and sortColumn.
 */
@Override
public ResponseEntity<org.pmiops.workbench.model.CohortReview> getParticipantCohortStatuses(String workspaceNamespace, String workspaceId, Long cohortId, Long cdrVersionId, PageFilterRequest request) {
    CohortReview cohortReview = null;
    Cohort cohort = cohortReviewService.findCohort(cohortId);
    Workspace workspace = cohortReviewService.validateMatchingWorkspace(workspaceNamespace, workspaceId, cohort.getWorkspaceId(), WorkspaceAccessLevel.READER);
    CdrVersionContext.setCdrVersion(workspace.getCdrVersion());
    try {
        cohortReview = cohortReviewService.findCohortReview(cohortId, cdrVersionId);
    } catch (NotFoundException nfe) {
        cohortReview = initializeCohortReview(cdrVersionId, cohort);
    }
    PageRequest pageRequest = createPageRequest(request);
    List<Filter> filters = request.getFilters() == null ? Collections.<Filter>emptyList() : request.getFilters().getItems();
    List<ParticipantCohortStatus> participantCohortStatuses = cohortReviewService.findAll(cohortReview.getCohortReviewId(), filters, pageRequest);
    org.pmiops.workbench.model.CohortReview responseReview = TO_CLIENT_COHORTREVIEW.apply(cohortReview, pageRequest);
    responseReview.setParticipantCohortStatuses(participantCohortStatuses.stream().map(TO_CLIENT_PARTICIPANT).collect(Collectors.toList()));
    return ResponseEntity.ok(responseReview);
}