Examples with Cohort org.pmiops.workbench.model.Cohort used on opensource projects

Example 11 with Cohort

use of org.pmiops.workbench.model.Cohort in project workbench by all-of-us.

the class CohortsControllerTest method testMaterializeCohortNamedCohort.

@Test
public void testMaterializeCohortNamedCohort() throws Exception {
    Cohort cohort = createDefaultCohort();
    cohort = cohortsController.createCohort(workspace.getNamespace(), workspace.getId(), cohort).getBody();
    MaterializeCohortRequest request = new MaterializeCohortRequest();
    request.setCohortName(cohort.getName());
    MaterializeCohortResponse response = new MaterializeCohortResponse();
    when(cohortMaterializationService.materializeCohort(null, searchRequest, request)).thenReturn(response);
    assertThat(cohortsController.materializeCohort(WORKSPACE_NAMESPACE, WORKSPACE_NAME, request).getBody()).isEqualTo(response);
}

Example 12 with Cohort

use of org.pmiops.workbench.model.Cohort in project workbench by all-of-us.

the class WorkspacesControllerTest method createDefaultCohort.

public Cohort createDefaultCohort(String name) {
    Cohort cohort = new Cohort();
    cohort.setName(name);
    cohort.setCriteria(new Gson().toJson(SearchRequests.males()));
    return cohort;
}

Example 13 with Cohort

use of org.pmiops.workbench.model.Cohort in project workbench by all-of-us.

the class CohortsControllerTest method testMaterializeCohortWithEverything.

@Test
public void testMaterializeCohortWithEverything() throws Exception {
    Cohort cohort = createDefaultCohort();
    cohort = cohortsController.createCohort(workspace.getNamespace(), workspace.getId(), cohort).getBody();
    MaterializeCohortRequest request = new MaterializeCohortRequest();
    request.setCohortName(cohort.getName());
    request.setPageSize(123);
    request.setPageToken("token");
    request.setCdrVersionName(CDR_VERSION_NAME);
    List<CohortStatus> statuses = ImmutableList.of(CohortStatus.INCLUDED, CohortStatus.NOT_REVIEWED);
    request.setStatusFilter(statuses);
    MaterializeCohortResponse response = new MaterializeCohortResponse();
    when(cohortMaterializationService.materializeCohort(null, searchRequest, request)).thenReturn(response);
    assertThat(cohortsController.materializeCohort(WORKSPACE_NAMESPACE, WORKSPACE_NAME, request).getBody()).isEqualTo(response);
}

Example 14 with Cohort

use of org.pmiops.workbench.model.Cohort in project workbench by all-of-us.

the class CohortsControllerTest method testMaterializeCohortNamedCohortWithReview.

@Test
public void testMaterializeCohortNamedCohortWithReview() throws Exception {
    Cohort cohort = createDefaultCohort();
    cohort = cohortsController.createCohort(workspace.getNamespace(), workspace.getId(), cohort).getBody();
    CohortReview cohortReview = new CohortReview();
    cohortReview.setCohortId(cohort.getId());
    cohortReview.setCdrVersionId(cdrVersion.getCdrVersionId());
    cohortReview.setReviewSize(2);
    cohortReview.setReviewedCount(2);
    cohortReviewDao.save(cohortReview);
    MaterializeCohortRequest request = new MaterializeCohortRequest();
    request.setCohortName(cohort.getName());
    MaterializeCohortResponse response = new MaterializeCohortResponse();
    when(cohortMaterializationService.materializeCohort(cohortReview, searchRequest, request)).thenReturn(response);
    assertThat(cohortsController.materializeCohort(WORKSPACE_NAMESPACE, WORKSPACE_NAME, request).getBody()).isEqualTo(response);
}

Example 15 with Cohort

use of org.pmiops.workbench.model.Cohort in project workbench by all-of-us.

the class CohortsControllerTest method createDefaultCohort.

public Cohort createDefaultCohort() {
    Cohort cohort = new Cohort();
    cohort.setName(COHORT_NAME);
    cohort.setCriteria(cohortCriteria);
    return cohort;
}