Examples with TimeWrapper org.vcell.util.TimeWrapper used on opensource projects

Example 16 with TimeWrapper

use of org.vcell.util.TimeWrapper in project vcell by virtualcell.

the class DBCacheTable method put.

private synchronized TimeWrapper put(Object key, TimeWrapper timeWrapper) throws CacheException {
    long dataMemSize = timeWrapper.getSize();
    if (dataMemSize >= maxMemSize) {
        throw new CacheException("data item " + key + " with memSize=" + dataMemSize + " too large, maxCacheSize=" + maxMemSize);
    }
    // 
    if (dataMemSize + currMemSize >= maxMemSize) {
        resize(Math.min((long) (maxMemSize * cleanupFraction), maxMemSize - dataMemSize));
    }
    TimeWrapper oldTimeWrapper = (TimeWrapper) hashTable.put(key, timeWrapper);
    currMemSize += dataMemSize;
    if (oldTimeWrapper != null) {
        currMemSize -= oldTimeWrapper.getSize();
    }
    if (currMemSize < 0 || currMemSize >= maxMemSize) {
        throw new CacheException("Error: adding data item " + key + ". currMemSize=" + currMemSize + " maxMemSize=" + maxMemSize);
    }
    return oldTimeWrapper;
}

Example 17 with TimeWrapper

use of org.vcell.util.TimeWrapper in project vcell by virtualcell.

the class DBCacheTable method putUnprotected.

public void putUnprotected(KeyValue key, Cacheable cacheable) throws CacheException {
    if (!((cacheable instanceof Cloneable) || (cacheable instanceof Immutable) || (cacheable instanceof Serializable))) {
        throw new CacheException("put:Object not Cloneable, Immutable or Serializable");
    }
    if (key == null) {
        throw new CacheException("put: key == null");
    }
    long dataSize = 1000;
    try {
        byte[] objData = org.vcell.util.BeanUtils.toSerialized(cacheable);
        dataSize = objData.length;
    } catch (IOException e) {
        e.printStackTrace(System.out);
        throw new CacheException(e.getMessage());
    }
    TimeWrapper oldTimeWrapper = put(key, new TimeWrapper(new DbObjectWrapper(cacheable), dataSize, key));
    // 
    if (oldTimeWrapper != null) {
        System.out.println("replacing object ALREADY IN DATABASE_CACHE " + oldTimeWrapper.getObject() + " at key " + key);
    }
    // 
    // checking to see if same object (using compareEqual) already in hash
    // 
    // if (cacheable instanceof cbit.vcell.model.Species){
    // Enumeration enum1 = hashTable.elements();
    // while (enum1.hasMoreElements()){
    // TimeWrapper timeWrapper = (TimeWrapper) enum1.nextElement();
    // DbObjectWrapper objWrapper = (DbObjectWrapper) timeWrapper.getObject();
    // Cacheable cacheObj = objWrapper.getWorkingCopy();
    // if (cacheable != cacheObj && cacheable.compareEqual(cacheObj)){
    // //	throw new RuntimeException("DBCacheTable.put("+cacheable+"), already in cache as ("+cacheObj+")");
    // System.out.println("DBCacheTable.put("+cacheable+"), already in cache as ("+cacheObj+")");
    // }
    // }
    // }
    // System.out.print("put(cacheable="+cacheable+") ");
    show();
}

Example 18 with TimeWrapper

use of org.vcell.util.TimeWrapper in project vcell by virtualcell.

the class DBCacheTable method get.

public synchronized Cacheable get(KeyValue key) {
    TimeWrapper timeWrapper = (TimeWrapper) hashTable.get(key);
    if (timeWrapper != null) {
        DbObjectWrapper objWrapper = (DbObjectWrapper) timeWrapper.getObject();
        Cacheable cacheable = objWrapper.getWorkingCopy();
        // System.out.println("DBCacheTable.get: "+cacheable.getClass().getName());
        return cacheable;
    } else {
        // System.out.println("DBCacheTable.get: null");
        return null;
    }
}