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Example 11 with GetAllEdges

use of uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges in project Gaffer by gchq.

the class LoadAndQuery11 method run.

public Iterable<Entity> run() throws OperationException {
    // [user] Create a user
    // ---------------------------------------------------------
    final User user = new User("user01");
    // ---------------------------------------------------------
    // [graph] create a graph using our schema and store properties
    // ---------------------------------------------------------
    final Graph graph = new Graph.Builder().addSchemas(getSchemas()).storeProperties(getStoreProperties()).build();
    // ---------------------------------------------------------
    // [add] add the edges to the graph
    // ---------------------------------------------------------
    final Set<String> dummyData = Collections.singleton("");
    final OperationChain addOpChain = new OperationChain.Builder().first(new GenerateElements.Builder<String>().generator(new DataGenerator11()).objects(dummyData).build()).then(new AddElements()).build();
    graph.execute(addOpChain, user);
    // ---------------------------------------------------------
    log("Added an edge A-B 1000 times, each time with a DoublesUnion containing a normally distributed" + " (mean 0, standard deviation 1) random double.");
    // [get] Get all edges
    // ---------------------------------------------------------
    Iterable<Edge> allEdges = graph.execute(new GetAllEdges(), user);
    // ---------------------------------------------------------
    log("\nAll edges:");
    for (final Edge edge : allEdges) {
        log("GET_ALL_EDGES_RESULT", edge.toString());
    }
    // [get 0.25, 0.5, 0.75 percentiles] Get the edge A-B and print an estimate of the 0.25, 0.5 and 0.75 quantiles, i.e. the 25th, 50th and 75th percentiles
    // ---------------------------------------------------------
    final GetEdges<EdgeSeed> query = new GetEdges.Builder<EdgeSeed>().addSeed(new EdgeSeed("A", "B", false)).build();
    final Iterable<Edge> edges = graph.execute(query, user);
    final Edge edge = edges.iterator().next();
    final DoublesUnion doublesUnion = (DoublesUnion) edge.getProperty("doublesUnion");
    final double[] quantiles = doublesUnion.getResult().getQuantiles(new double[] { 0.25D, 0.5D, 0.75D });
    final String quantilesEstimate = "Edge A-B with percentiles of double property - 25th percentile: " + quantiles[0] + ", 50th percentile: " + quantiles[1] + ", 75th percentile: " + quantiles[2];
    // ---------------------------------------------------------
    log("\nEdge A-B with an estimate of the median value");
    log("GET_0.25,0.5,0.75_PERCENTILES_FOR_EDGE_A_B", quantilesEstimate);
    // [get cdf] Get the edge A-B and print some values from the cumulative density function
    // ---------------------------------------------------------
    final GetEdges<EdgeSeed> query2 = new GetEdges.Builder<EdgeSeed>().addSeed(new EdgeSeed("A", "B", false)).build();
    final Iterable<Edge> edges2 = graph.execute(query2, user);
    final Edge edge2 = edges2.iterator().next();
    final DoublesSketch doublesSketch2 = ((DoublesUnion) edge2.getProperty("doublesUnion")).getResult();
    final double[] cdf = doublesSketch2.getCDF(new double[] { 0.0D, 1.0D, 2.0D });
    final String cdfEstimate = "Edge A-B with CDF values at 0: " + cdf[0] + ", at 1: " + cdf[1] + ", at 2: " + cdf[2];
    // ---------------------------------------------------------
    log("\nEdge A-B with the cumulative density function values at 0, 1, 2");
    log("GET_CDF_FOR_EDGE_A_B_RESULT", cdfEstimate);
    return null;
}
Also used : DataGenerator11(uk.gov.gchq.gaffer.example.gettingstarted.generator.DataGenerator11) AddElements(uk.gov.gchq.gaffer.operation.impl.add.AddElements) DoublesSketch(com.yahoo.sketches.quantiles.DoublesSketch) DoublesUnion(com.yahoo.sketches.quantiles.DoublesUnion) User(uk.gov.gchq.gaffer.user.User) Graph(uk.gov.gchq.gaffer.graph.Graph) GetAllEdges(uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges) OperationChain(uk.gov.gchq.gaffer.operation.OperationChain) EdgeSeed(uk.gov.gchq.gaffer.operation.data.EdgeSeed) Edge(uk.gov.gchq.gaffer.data.element.Edge)

Example 12 with GetAllEdges

use of uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges in project Gaffer by gchq.

the class LoadAndQuery9 method run.

public Iterable<Entity> run() throws OperationException {
    // [user] Create a user
    // ---------------------------------------------------------
    final User user = new User("user01");
    // ---------------------------------------------------------
    // [graph] create a graph using our schema and store properties
    // ---------------------------------------------------------
    final Graph graph = new Graph.Builder().addSchemas(getSchemas()).storeProperties(getStoreProperties()).build();
    // ---------------------------------------------------------
    // [add] add the edges to the graph
    // ---------------------------------------------------------
    final OperationChain addOpChain = new OperationChain.Builder().first(new GenerateElements.Builder<String>().generator(new DataGenerator9()).objects(DataUtils.loadData(getData())).build()).then(new AddElements()).build();
    graph.execute(addOpChain, user);
    // ---------------------------------------------------------
    // [get] Get all edges
    // ---------------------------------------------------------
    final Iterable<Edge> edges = graph.execute(new GetAllEdges(), user);
    // ---------------------------------------------------------
    log("\nAll edges:");
    for (final Edge edge : edges) {
        log("GET_ALL_EDGES_RESULT", edge.toString());
    }
    // [get all cardinalities] Get all cardinalities
    // ---------------------------------------------------------
    final GetAllEntities getAllCardinalities = new GetAllEntities.Builder().view(new View.Builder().entity("Cardinality").build()).build();
    // ---------------------------------------------------------
    final CloseableIterable<Entity> allCardinalities = graph.execute(getAllCardinalities, user);
    log("\nAll cardinalities");
    for (final Entity cardinality : allCardinalities) {
        final String edgeGroup = (cardinality.getProperty("edgeGroup")).toString();
        log("ALL_CARDINALITIES_RESULT", "Vertex " + cardinality.getVertex() + " " + edgeGroup + ": " + ((HyperLogLogPlus) cardinality.getProperty("hllp")).cardinality());
    }
    // [get all summarised cardinalities] Get all summarised cardinalities over all edges
    // ---------------------------------------------------------
    final GetAllEntities getAllSummarisedCardinalities = new GetAllEntities.Builder().view(new View.Builder().entity("Cardinality", new ViewElementDefinition.Builder().groupBy().build()).build()).build();
    // ---------------------------------------------------------
    final CloseableIterable<Entity> allSummarisedCardinalities = graph.execute(getAllSummarisedCardinalities, user);
    log("\nAll summarised cardinalities");
    for (final Entity cardinality : allSummarisedCardinalities) {
        final String edgeGroup = (cardinality.getProperty("edgeGroup")).toString();
        log("ALL_SUMMARISED_CARDINALITIES_RESULT", "Vertex " + cardinality.getVertex() + " " + edgeGroup + ": " + ((HyperLogLogPlus) cardinality.getProperty("hllp")).cardinality());
    }
    // [get red edge cardinality 1] Get the cardinality value at vertex 1 for red edges
    // ---------------------------------------------------------
    final GetEntities<EntitySeed> getCardinalities = new GetEntities.Builder<EntitySeed>().addSeed(new EntitySeed("1")).view(new View.Builder().entity("Cardinality", new ViewElementDefinition.Builder().preAggregationFilter(new ElementFilter.Builder().select("edgeGroup").execute(new IsEqual(CollectionUtil.treeSet("red"))).build()).build()).build()).build();
    // ---------------------------------------------------------
    final Entity redCardinality = graph.execute(getCardinalities, user).iterator().next();
    // ---------------------------------------------------------
    log("\nRed edge cardinality at vertex 1:");
    final String edgeGroup = (redCardinality.getProperty("edgeGroup")).toString();
    log("CARDINALITY_OF_1_RESULT", "Vertex " + redCardinality.getVertex() + " " + edgeGroup + ": " + ((HyperLogLogPlus) redCardinality.getProperty("hllp")).cardinality());
    return allSummarisedCardinalities;
}
Also used : AddElements(uk.gov.gchq.gaffer.operation.impl.add.AddElements) Entity(uk.gov.gchq.gaffer.data.element.Entity) GetAllEntities(uk.gov.gchq.gaffer.operation.impl.get.GetAllEntities) User(uk.gov.gchq.gaffer.user.User) GetEntities(uk.gov.gchq.gaffer.operation.impl.get.GetEntities) IsEqual(uk.gov.gchq.gaffer.function.filter.IsEqual) DataGenerator9(uk.gov.gchq.gaffer.example.gettingstarted.generator.DataGenerator9) Graph(uk.gov.gchq.gaffer.graph.Graph) HyperLogLogPlus(com.clearspring.analytics.stream.cardinality.HyperLogLogPlus) GetAllEdges(uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges) OperationChain(uk.gov.gchq.gaffer.operation.OperationChain) ElementFilter(uk.gov.gchq.gaffer.data.element.function.ElementFilter) EntitySeed(uk.gov.gchq.gaffer.operation.data.EntitySeed) Edge(uk.gov.gchq.gaffer.data.element.Edge)

Example 13 with GetAllEdges

use of uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges in project Gaffer by gchq.

the class GetJobDetailsExample method getJobDetailsInOperationChain.

public JobDetail getJobDetailsInOperationChain() {
    // ---------------------------------------------------------
    final OperationChain<JobDetail> opChain = new OperationChain.Builder().first(new GetAllEdges()).then(new GetJobDetails()).build();
    // ---------------------------------------------------------
    final JobDetail jobDetail = runExample(opChain);
    jobId = jobDetail.getJobId();
    return jobDetail;
}
Also used : GetJobDetails(uk.gov.gchq.gaffer.operation.impl.job.GetJobDetails) JobDetail(uk.gov.gchq.gaffer.jobtracker.JobDetail) GetAllEdges(uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges) OperationChain(uk.gov.gchq.gaffer.operation.OperationChain)

Example 14 with GetAllEdges

use of uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges in project Gaffer by gchq.

the class GetJobResultsExample method runExamples.

@Override
public void runExamples() {
    try {
        final OperationChain<JobDetail> opChain = new OperationChain.Builder().first(new GetAllEdges()).then(new ExportToGafferResultCache()).then(new GetJobDetails()).build();
        final JobDetail jobDetails = getGraph().execute(opChain, new User("user01"));
        jobId = jobDetails.getJobId();
    } catch (final OperationException e) {
        throw new RuntimeException(e);
    }
    getJobResults();
}
Also used : GetJobDetails(uk.gov.gchq.gaffer.operation.impl.job.GetJobDetails) JobDetail(uk.gov.gchq.gaffer.jobtracker.JobDetail) User(uk.gov.gchq.gaffer.user.User) GetAllEdges(uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges) ExportToGafferResultCache(uk.gov.gchq.gaffer.operation.impl.export.resultcache.ExportToGafferResultCache) OperationException(uk.gov.gchq.gaffer.operation.OperationException)

Aggregations

GetAllEdges (uk.gov.gchq.gaffer.operation.impl.get.GetAllEdges)14 User (uk.gov.gchq.gaffer.user.User)10 OperationChain (uk.gov.gchq.gaffer.operation.OperationChain)9 Edge (uk.gov.gchq.gaffer.data.element.Edge)6 Graph (uk.gov.gchq.gaffer.graph.Graph)6 JobDetail (uk.gov.gchq.gaffer.jobtracker.JobDetail)6 AddElements (uk.gov.gchq.gaffer.operation.impl.add.AddElements)5 GetJobDetails (uk.gov.gchq.gaffer.operation.impl.job.GetJobDetails)5 Test (org.junit.Test)4 EdgeSeed (uk.gov.gchq.gaffer.operation.data.EdgeSeed)3 ExportToGafferResultCache (uk.gov.gchq.gaffer.operation.impl.export.resultcache.ExportToGafferResultCache)3 Entity (uk.gov.gchq.gaffer.data.element.Entity)2 EntitySeed (uk.gov.gchq.gaffer.operation.data.EntitySeed)2 HyperLogLogPlus (com.clearspring.analytics.stream.cardinality.HyperLogLogPlus)1 LongsSketch (com.yahoo.sketches.frequencies.LongsSketch)1 DoublesSketch (com.yahoo.sketches.quantiles.DoublesSketch)1 DoublesUnion (com.yahoo.sketches.quantiles.DoublesUnion)1 ReservoirItemsUnion (com.yahoo.sketches.sampling.ReservoirItemsUnion)1 UnauthorisedException (uk.gov.gchq.gaffer.commonutil.exception.UnauthorisedException)1 CloseableIterable (uk.gov.gchq.gaffer.commonutil.iterable.CloseableIterable)1