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Example 1 with AttributeType

use of edu.uci.ics.textdb.api.schema.AttributeType in project textdb by TextDB.

the class TupleJsonDeserializer method deserialize.

@Override
public Tuple deserialize(JsonParser p, DeserializationContext ctxt) throws IOException, JsonProcessingException {
    JsonNode node = p.getCodec().readTree(p);
    JsonNode schemaNode = node.get(JsonConstants.SCHEMA);
    JsonNode fieldsNode = node.get(JsonConstants.FIELDS);
    Schema schema = new ObjectMapper().treeToValue(schemaNode, Schema.class);
    ArrayList<IField> fields = new ArrayList<>();
    for (int i = 0; i < schema.getAttributes().size(); i++) {
        AttributeType attributeType = schema.getAttributes().get(i).getAttributeType();
        JsonNode fieldNode = fieldsNode.get(i);
        IField field = new ObjectMapper().treeToValue(fieldNode, attributeType.getFieldClass());
        fields.add(field);
    }
    return new Tuple(schema, fields);
}
Also used : AttributeType(edu.uci.ics.textdb.api.schema.AttributeType) Schema(edu.uci.ics.textdb.api.schema.Schema) ArrayList(java.util.ArrayList) JsonNode(com.fasterxml.jackson.databind.JsonNode) IField(edu.uci.ics.textdb.api.field.IField) ObjectMapper(com.fasterxml.jackson.databind.ObjectMapper)

Example 2 with AttributeType

use of edu.uci.ics.textdb.api.schema.AttributeType in project textdb by TextDB.

the class DataReader method buildPayloadFromTermVector.

private ArrayList<Span> buildPayloadFromTermVector(List<IField> fields, int docID) throws IOException {
    ArrayList<Span> payloadSpanList = new ArrayList<>();
    for (Attribute attr : inputSchema.getAttributes()) {
        String attributeName = attr.getAttributeName();
        AttributeType attributeType = attr.getAttributeType();
        // payload.
        if (attributeType != AttributeType.TEXT) {
            continue;
        }
        String fieldValue = fields.get(inputSchema.getIndex(attributeName)).getValue().toString();
        Terms termVector = luceneIndexReader.getTermVector(docID, attributeName);
        if (termVector == null) {
            continue;
        }
        TermsEnum termsEnum = termVector.iterator();
        PostingsEnum termPostings = null;
        // go through document terms
        while ((termsEnum.next()) != null) {
            termPostings = termsEnum.postings(termPostings, PostingsEnum.ALL);
            if (termPostings.nextDoc() == DocIdSetIterator.NO_MORE_DOCS) {
                continue;
            }
            // for each term, go through its postings
            for (int i = 0; i < termPostings.freq(); i++) {
                // nextPosition needs to be called first
                int tokenPosition = termPostings.nextPosition();
                int charStart = termPostings.startOffset();
                int charEnd = termPostings.endOffset();
                String analyzedTermStr = termsEnum.term().utf8ToString();
                String originalTermStr = fieldValue.substring(charStart, charEnd);
                Span span = new Span(attributeName, charStart, charEnd, analyzedTermStr, originalTermStr, tokenPosition);
                payloadSpanList.add(span);
            }
        }
    }
    return payloadSpanList;
}
Also used : Attribute(edu.uci.ics.textdb.api.schema.Attribute) AttributeType(edu.uci.ics.textdb.api.schema.AttributeType) ArrayList(java.util.ArrayList) Terms(org.apache.lucene.index.Terms) PostingsEnum(org.apache.lucene.index.PostingsEnum) Span(edu.uci.ics.textdb.api.span.Span) TermsEnum(org.apache.lucene.index.TermsEnum)

Example 3 with AttributeType

use of edu.uci.ics.textdb.api.schema.AttributeType in project textdb by TextDB.

the class KeywordMatcherSourceOperator method buildConjunctionQuery.

private Query buildConjunctionQuery() throws DataFlowException {
    BooleanQuery.Builder booleanQueryBuilder = new BooleanQuery.Builder();
    for (String attributeName : this.predicate.getAttributeNames()) {
        AttributeType attributeType = this.inputSchema.getAttribute(attributeName).getAttributeType();
        // types other than TEXT and STRING: throw Exception for now
        if (attributeType != AttributeType.STRING && attributeType != AttributeType.TEXT) {
            throw new DataFlowException("KeywordPredicate: Fields other than STRING and TEXT are not supported yet");
        }
        if (attributeType == AttributeType.STRING) {
            Query termQuery = new TermQuery(new Term(attributeName, predicate.getQuery()));
            booleanQueryBuilder.add(termQuery, BooleanClause.Occur.SHOULD);
        }
        if (attributeType == AttributeType.TEXT) {
            BooleanQuery.Builder fieldQueryBuilder = new BooleanQuery.Builder();
            for (String token : queryTokenSet) {
                Query termQuery = new TermQuery(new Term(attributeName, token.toLowerCase()));
                fieldQueryBuilder.add(termQuery, BooleanClause.Occur.MUST);
            }
            booleanQueryBuilder.add(fieldQueryBuilder.build(), BooleanClause.Occur.SHOULD);
        }
    }
    return booleanQueryBuilder.build();
}
Also used : BooleanQuery(org.apache.lucene.search.BooleanQuery) TermQuery(org.apache.lucene.search.TermQuery) Query(org.apache.lucene.search.Query) PhraseQuery(org.apache.lucene.search.PhraseQuery) MatchAllDocsQuery(org.apache.lucene.search.MatchAllDocsQuery) TermQuery(org.apache.lucene.search.TermQuery) BooleanQuery(org.apache.lucene.search.BooleanQuery) AttributeType(edu.uci.ics.textdb.api.schema.AttributeType) DataFlowException(edu.uci.ics.textdb.api.exception.DataFlowException) Term(org.apache.lucene.index.Term)

Example 4 with AttributeType

use of edu.uci.ics.textdb.api.schema.AttributeType in project textdb by TextDB.

the class FuzzyTokenMatcher method processOneInputTuple.

@Override
public Tuple processOneInputTuple(Tuple inputTuple) throws TextDBException {
    ListField<Span> payloadField = inputTuple.getField(SchemaConstants.PAYLOAD);
    List<Span> payload = payloadField.getValue();
    List<Span> relevantSpans = filterRelevantSpans(payload);
    List<Span> matchResults = new ArrayList<>();
    /*
         * The source operator returns spans even for those fields which did not
         * satisfy the threshold criterion. So if two attributes A,B have 10 and
         * 5 matching tokens, and we set threshold to 10, the number of spans
         * returned is 15. So we need to filter those 5 spans for attribute B.
         */
    for (String attributeName : this.predicate.getAttributeNames()) {
        AttributeType attributeType = this.inputSchema.getAttribute(attributeName).getAttributeType();
        // types other than TEXT and STRING: throw Exception for now
        if (attributeType != AttributeType.TEXT && attributeType != AttributeType.STRING) {
            throw new DataFlowException("FuzzyTokenMatcher: Fields other than TEXT or STRING are not supported");
        }
        List<Span> fieldSpans = relevantSpans.stream().filter(span -> span.getAttributeName().equals(attributeName)).filter(span -> predicate.getQueryTokens().contains(span.getKey())).collect(Collectors.toList());
        if (fieldSpans.size() >= predicate.getThreshold()) {
            matchResults.addAll(fieldSpans);
        }
    }
    if (matchResults.isEmpty()) {
        return null;
    }
    ListField<Span> spanListField = inputTuple.getField(predicate.getSpanListName());
    List<Span> spanList = spanListField.getValue();
    spanList.addAll(matchResults);
    return inputTuple;
}
Also used : SchemaConstants(edu.uci.ics.textdb.api.constants.SchemaConstants) Attribute(edu.uci.ics.textdb.api.schema.Attribute) Iterator(java.util.Iterator) ErrorMessages(edu.uci.ics.textdb.api.constants.ErrorMessages) AbstractSingleInputOperator(edu.uci.ics.textdb.exp.common.AbstractSingleInputOperator) DataFlowException(edu.uci.ics.textdb.api.exception.DataFlowException) Utils(edu.uci.ics.textdb.api.utils.Utils) Collectors(java.util.stream.Collectors) ArrayList(java.util.ArrayList) AttributeType(edu.uci.ics.textdb.api.schema.AttributeType) Schema(edu.uci.ics.textdb.api.schema.Schema) List(java.util.List) ListField(edu.uci.ics.textdb.api.field.ListField) TextDBException(edu.uci.ics.textdb.api.exception.TextDBException) Span(edu.uci.ics.textdb.api.span.Span) DataflowUtils(edu.uci.ics.textdb.exp.utils.DataflowUtils) Tuple(edu.uci.ics.textdb.api.tuple.Tuple) AttributeType(edu.uci.ics.textdb.api.schema.AttributeType) ArrayList(java.util.ArrayList) DataFlowException(edu.uci.ics.textdb.api.exception.DataFlowException) Span(edu.uci.ics.textdb.api.span.Span)

Example 5 with AttributeType

use of edu.uci.ics.textdb.api.schema.AttributeType in project textdb by TextDB.

the class NlpSentimentOperator method open.

@Override
public void open() throws TextDBException {
    if (cursor != CLOSED) {
        return;
    }
    if (inputOperator == null) {
        throw new DataFlowException(ErrorMessages.INPUT_OPERATOR_NOT_SPECIFIED);
    }
    inputOperator.open();
    Schema inputSchema = inputOperator.getOutputSchema();
    // check if input schema is present
    if (!inputSchema.containsField(predicate.getInputAttributeName())) {
        throw new RuntimeException(String.format("input attribute %s is not in the input schema %s", predicate.getInputAttributeName(), inputSchema.getAttributeNames()));
    }
    // check if attribute type is valid
    AttributeType inputAttributeType = inputSchema.getAttribute(predicate.getInputAttributeName()).getAttributeType();
    boolean isValidType = inputAttributeType.equals(AttributeType.STRING) || inputAttributeType.equals(AttributeType.TEXT);
    if (!isValidType) {
        throw new RuntimeException(String.format("input attribute %s must have type String or Text, its actual type is %s", predicate.getInputAttributeName(), inputAttributeType));
    }
    // generate output schema by transforming the input schema
    outputSchema = transformSchema(inputOperator.getOutputSchema());
    cursor = OPENED;
    // setup NLP sentiment analysis pipeline
    Properties props = new Properties();
    props.setProperty("annotators", "tokenize, ssplit, parse, sentiment");
    sentimentPipeline = new StanfordCoreNLP(props);
}
Also used : AttributeType(edu.uci.ics.textdb.api.schema.AttributeType) Schema(edu.uci.ics.textdb.api.schema.Schema) DataFlowException(edu.uci.ics.textdb.api.exception.DataFlowException) Properties(java.util.Properties) StanfordCoreNLP(edu.stanford.nlp.pipeline.StanfordCoreNLP)

Aggregations

AttributeType (edu.uci.ics.textdb.api.schema.AttributeType)17 ArrayList (java.util.ArrayList)11 DataFlowException (edu.uci.ics.textdb.api.exception.DataFlowException)10 Attribute (edu.uci.ics.textdb.api.schema.Attribute)8 Schema (edu.uci.ics.textdb.api.schema.Schema)8 Span (edu.uci.ics.textdb.api.span.Span)8 IField (edu.uci.ics.textdb.api.field.IField)5 SchemaConstants (edu.uci.ics.textdb.api.constants.SchemaConstants)4 ListField (edu.uci.ics.textdb.api.field.ListField)4 Tuple (edu.uci.ics.textdb.api.tuple.Tuple)4 Iterator (java.util.Iterator)4 List (java.util.List)4 Matcher (java.util.regex.Matcher)4 Pattern (java.util.regex.Pattern)4 Collectors (java.util.stream.Collectors)4 ErrorMessages (edu.uci.ics.textdb.api.constants.ErrorMessages)3 TextDBException (edu.uci.ics.textdb.api.exception.TextDBException)3 Utils (edu.uci.ics.textdb.api.utils.Utils)3 AbstractSingleInputOperator (edu.uci.ics.textdb.exp.common.AbstractSingleInputOperator)3 DataflowUtils (edu.uci.ics.textdb.exp.utils.DataflowUtils)3