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Example 1 with XForm

use of org.akaza.openclinica.web.pform.formlist.XForm in project OpenClinica by OpenClinica.

the class OpenRosaServices method getForm.

@GET
@Path("/{studyOID}/form")
@Produces(MediaType.TEXT_XML)
public XFormList getForm(@Context HttpServletRequest request, @Context HttpServletResponse response, @PathParam("studyOID") String studyOID, @QueryParam("formID") String uniqueId, @RequestHeader("Authorization") String authorization, @Context ServletContext context) throws Exception {
    LoggerContext lc = (LoggerContext) LoggerFactory.getILoggerFactory();
    // print logback's internal status
    StatusPrinter.print(lc);
    if (!mayProceedPreview(studyOID))
        return null;
    String flavor = getQuerySet(uniqueId);
    String formLayoutOid = getFormLayoutOid(uniqueId);
    FormLayout formLayout = formLayoutDao.findByOcOID(formLayoutOid);
    CrfBean crf = crfDao.findById(formLayout.getCrf().getCrfId());
    String xformOutput = "";
    String directoryPath = Utils.getCrfMediaFilePath(crf.getOcOid(), formLayout.getOcOid());
    File dir = new File(directoryPath);
    File[] directoryListing = dir.listFiles();
    if (directoryListing != null) {
        for (File child : directoryListing) {
            if (flavor.equals(QUERY_FLAVOR) && child.getName().endsWith(QUERY_SUFFIX) || flavor.equals(NO_FLAVOR) && child.getName().endsWith(NO_SUFFIX)) {
                xformOutput = new String(Files.readAllBytes(Paths.get(child.getPath())));
                break;
            }
        }
    }
    XFormList formList = null;
    try {
        formList = new XFormList();
        XForm form = new XForm(crf, formLayout);
        // TODO Uncomment this before checking in
        if (StringUtils.isNotEmpty(xformOutput)) {
            form.setHash(DigestUtils.md5Hex(xformOutput));
        }
        String urlBase = getCoreResources().getDataInfo().getProperty("sysURL").split("/MainMenu")[0];
        List<FormLayoutMedia> mediaList = formLayoutMediaDao.findByFormLayoutIdForNoteTypeMedia(formLayout.getFormLayoutId());
        if (flavor.equals(QUERY_FLAVOR)) {
            form.setDownloadURL(urlBase + "/rest2/openrosa/" + studyOID + "/formXml?formId=" + formLayout.getOcOid() + QUERY);
            form.setManifestURL(urlBase + "/rest2/openrosa/" + studyOID + "/manifest?formId=" + formLayout.getOcOid() + QUERY);
            form.setFormID(formLayout.getOcOid() + QUERY);
        } else {
            form.setDownloadURL(urlBase + "/rest2/openrosa/" + studyOID + "/formXml?formId=" + formLayout.getOcOid());
            form.setManifestURL(urlBase + "/rest2/openrosa/" + studyOID + "/manifest?formId=" + formLayout.getOcOid());
        }
        formList.add(form);
    } catch (Exception e) {
        LOGGER.error(e.getMessage());
        LOGGER.error(ExceptionUtils.getStackTrace(e));
    // return "<Error>" + e.getMessage() + "</Error>";
    }
    return formList;
}
Also used : FormLayout(org.akaza.openclinica.domain.datamap.FormLayout) CrfBean(org.akaza.openclinica.domain.datamap.CrfBean) XFormList(org.akaza.openclinica.web.pform.formlist.XFormList) XForm(org.akaza.openclinica.web.pform.formlist.XForm) FormLayoutMedia(org.akaza.openclinica.domain.datamap.FormLayoutMedia) LoggerContext(ch.qos.logback.classic.LoggerContext) MediaFile(org.akaza.openclinica.web.pform.manifest.MediaFile) File(java.io.File) WebApplicationException(javax.ws.rs.WebApplicationException) IOException(java.io.IOException) Path(javax.ws.rs.Path) Produces(javax.ws.rs.Produces) GET(javax.ws.rs.GET)

Example 2 with XForm

use of org.akaza.openclinica.web.pform.formlist.XForm in project OpenClinica by OpenClinica.

the class OpenRosaServices method getFormList.

/**
 * @api {get} /rest2/openrosa/:studyOID/formList Get Form List
 * @apiName getFormList
 * @apiPermission admin
 * @apiVersion 3.8.0
 * @apiParam {String} studyOID Study Oid.
 * @apiGroup Form
 * @apiDescription Retrieves a listing of the available OpenClinica forms.
 * @apiParamExample {json} Request-Example:
 *                  {
 *                  "studyOid": "S_SAMPLTE",
 *                  }
 * @apiSuccessExample {xml} Success-Response:
 *                    HTTP/1.1 200 OK
 *                    {
 *                    <xforms xmlns="http://openrosa.org/xforms/xformsList">
 *                    <xform>
 *                    <formID>F_FIRSTFORM_1</formID>
 *                    <name>First Form</name>
 *                    <majorMinorVersion>1</majorMinorVersion>
 *                    <version>1</version>
 *                    <hash>8678370cd92814d4e3216d58d821403f</hash>
 *                    <downloadUrl>http://oc1.openclinica.com/OpenClinica-web/rest2/openrosa/S_SAMPLTE/formXml?
 *                    formId=F_FIRSTFORM_1</downloadUrl>
 *                    </xform>
 *                    <xform>
 *                    <formID>F_SECONDFORM_1</formID>
 *                    <name>Second Form</name>
 *                    <majorMinorVersion>1</majorMinorVersion>
 *                    <version>1</version>
 *                    <hash>7ee60d1c6516b730bbe9bdbd7cad942f</hash>
 *                    <downloadUrl>http://oc1.openclinica.com/OpenClinica-web/rest2/openrosa/S_SAMPLTE/formXml?
 *                    formId=F_SECONDFORM_1</downloadUrl>
 *                    </xform>
 *                    </xforms>
 */
@GET
@Path("/{studyOID}/formList")
@Produces(MediaType.TEXT_XML)
public String getFormList(@Context HttpServletRequest request, @Context HttpServletResponse response, @PathParam("studyOID") String studyOID, @QueryParam("formID") String crfOID, @RequestHeader("Authorization") String authorization, @Context ServletContext context) throws Exception {
    if (!mayProceedPreview(studyOID))
        return null;
    StudyDAO sdao = new StudyDAO(getDataSource());
    StudyBean study = sdao.findByOid(studyOID);
    CRFDAO cdao = new CRFDAO(getDataSource());
    Collection<CRFBean> crfs = cdao.findAll();
    CRFVersionDAO cVersionDao = new CRFVersionDAO(getDataSource());
    Collection<CRFVersionBean> crfVersions = cVersionDao.findAll();
    CrfVersionMediaDao mediaDao = (CrfVersionMediaDao) SpringServletAccess.getApplicationContext(context).getBean("crfVersionMediaDao");
    try {
        XFormList formList = new XFormList();
        for (CRFBean crf : crfs) {
            for (CRFVersionBean version : crfVersions) {
                if (version.getCrfId() == crf.getId()) {
                    XForm form = new XForm(crf, version);
                    // TODO: them.
                    if (version.getXformName() != null) {
                        form.setHash(DigestUtils.md5Hex(version.getXform()));
                    } else {
                        Calendar cal = Calendar.getInstance();
                        cal.setTime(new Date());
                        form.setHash(DigestUtils.md5Hex(String.valueOf(cal.getTimeInMillis())));
                    }
                    String urlBase = getCoreResources().getDataInfo().getProperty("sysURL").split("/MainMenu")[0];
                    form.setDownloadURL(urlBase + "/rest2/openrosa/" + studyOID + "/formXml?formId=" + version.getOid());
                    List<CrfVersionMedia> mediaList = mediaDao.findByCrfVersionId(version.getId());
                    if (mediaList != null && mediaList.size() > 0) {
                        form.setManifestURL(urlBase + "/rest2/openrosa/" + studyOID + "/manifest?formId=" + version.getOid());
                    }
                    formList.add(form);
                }
            }
        }
        // Create the XML formList using a Castor mapping file.
        XMLContext xmlContext = new XMLContext();
        Mapping mapping = xmlContext.createMapping();
        mapping.loadMapping(getCoreResources().getURL("openRosaFormListMapping.xml"));
        xmlContext.addMapping(mapping);
        Marshaller marshaller = xmlContext.createMarshaller();
        StringWriter writer = new StringWriter();
        marshaller.setWriter(writer);
        marshaller.marshal(formList);
        // Set response headers
        Calendar cal = Calendar.getInstance(TimeZone.getTimeZone("GMT"));
        Date currentDate = new Date();
        cal.setTime(currentDate);
        SimpleDateFormat format = new SimpleDateFormat("E, dd MMM yyyy HH:mm:ss zz");
        format.setCalendar(cal);
        response.setHeader("Content-Type", "text/xml; charset=UTF-8");
        response.setHeader("Date", format.format(currentDate));
        response.setHeader("X-OpenRosa-Version", "1.0");
        return writer.toString();
    } catch (Exception e) {
        LOGGER.error(e.getMessage());
        LOGGER.error(ExceptionUtils.getStackTrace(e));
        return "<Error>" + e.getMessage() + "</Error>";
    }
}
Also used : CRFDAO(org.akaza.openclinica.dao.admin.CRFDAO) XFormList(org.akaza.openclinica.web.pform.formlist.XFormList) Marshaller(org.exolab.castor.xml.Marshaller) CRFVersionDAO(org.akaza.openclinica.dao.submit.CRFVersionDAO) XForm(org.akaza.openclinica.web.pform.formlist.XForm) XMLContext(org.exolab.castor.xml.XMLContext) StudyBean(org.akaza.openclinica.bean.managestudy.StudyBean) Calendar(java.util.Calendar) Mapping(org.exolab.castor.mapping.Mapping) CrfVersionMediaDao(org.akaza.openclinica.dao.hibernate.CrfVersionMediaDao) Date(java.util.Date) WebApplicationException(javax.ws.rs.WebApplicationException) IOException(java.io.IOException) CRFBean(org.akaza.openclinica.bean.admin.CRFBean) CrfVersionMedia(org.akaza.openclinica.domain.datamap.CrfVersionMedia) StringWriter(java.io.StringWriter) CRFVersionBean(org.akaza.openclinica.bean.submit.CRFVersionBean) StudyDAO(org.akaza.openclinica.dao.managestudy.StudyDAO) SimpleDateFormat(java.text.SimpleDateFormat) Path(javax.ws.rs.Path) XPath(javax.xml.xpath.XPath) Produces(javax.ws.rs.Produces) GET(javax.ws.rs.GET)

Aggregations

IOException (java.io.IOException)2 GET (javax.ws.rs.GET)2 Path (javax.ws.rs.Path)2 Produces (javax.ws.rs.Produces)2 WebApplicationException (javax.ws.rs.WebApplicationException)2 XForm (org.akaza.openclinica.web.pform.formlist.XForm)2 XFormList (org.akaza.openclinica.web.pform.formlist.XFormList)2 LoggerContext (ch.qos.logback.classic.LoggerContext)1 File (java.io.File)1 StringWriter (java.io.StringWriter)1 SimpleDateFormat (java.text.SimpleDateFormat)1 Calendar (java.util.Calendar)1 Date (java.util.Date)1 XPath (javax.xml.xpath.XPath)1 CRFBean (org.akaza.openclinica.bean.admin.CRFBean)1 StudyBean (org.akaza.openclinica.bean.managestudy.StudyBean)1 CRFVersionBean (org.akaza.openclinica.bean.submit.CRFVersionBean)1 CRFDAO (org.akaza.openclinica.dao.admin.CRFDAO)1 CrfVersionMediaDao (org.akaza.openclinica.dao.hibernate.CrfVersionMediaDao)1 StudyDAO (org.akaza.openclinica.dao.managestudy.StudyDAO)1