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Example 1 with OrcidWork

use of org.orcid.jaxb.model.message.OrcidWork in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testAddWorkToDeprecatedAccount.

@Test(expected = OrcidDeprecatedException.class)
public void testAddWorkToDeprecatedAccount() {
    SecurityContextTestUtils.setUpSecurityContext();
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidMessage.setOrcidProfile(orcidProfile);
    orcidProfile.setOrcidIdentifier(new OrcidIdentifier("4444-4444-4444-444X"));
    OrcidActivities orcidActivities = new OrcidActivities();
    orcidProfile.setOrcidActivities(orcidActivities);
    OrcidWork work = new OrcidWork();
    WorkTitle title = new WorkTitle();
    title.setTitle(new Title("Title"));
    work.setWorkTitle(title);
    WorkExternalIdentifiers weis = new WorkExternalIdentifiers();
    WorkExternalIdentifier wei = new WorkExternalIdentifier();
    wei.setWorkExternalIdentifierId(new WorkExternalIdentifierId("00000001"));
    wei.setWorkExternalIdentifierType(WorkExternalIdentifierType.DOI);
    weis.getWorkExternalIdentifier().add(wei);
    work.setWorkExternalIdentifiers(weis);
    OrcidWorks orcidWorks = new OrcidWorks();
    orcidActivities.setOrcidWorks(orcidWorks);
    t2OrcidApiServiceDelegator.addWorks(mockedUriInfo, "4444-4444-4444-444X", orcidMessage);
}
Also used : OrcidProfile(org.orcid.jaxb.model.message.OrcidProfile) WorkExternalIdentifiers(org.orcid.jaxb.model.message.WorkExternalIdentifiers) WorkTitle(org.orcid.jaxb.model.message.WorkTitle) OrcidIdentifier(org.orcid.jaxb.model.message.OrcidIdentifier) OrcidMessage(org.orcid.jaxb.model.message.OrcidMessage) OrcidWork(org.orcid.jaxb.model.message.OrcidWork) WorkExternalIdentifierId(org.orcid.jaxb.model.message.WorkExternalIdentifierId) Title(org.orcid.jaxb.model.message.Title) WorkTitle(org.orcid.jaxb.model.message.WorkTitle) FundingTitle(org.orcid.jaxb.model.message.FundingTitle) WorkExternalIdentifier(org.orcid.jaxb.model.message.WorkExternalIdentifier) OrcidActivities(org.orcid.jaxb.model.message.OrcidActivities) OrcidWorks(org.orcid.jaxb.model.message.OrcidWorks) DBUnitTest(org.orcid.test.DBUnitTest) Test(org.junit.Test)

Example 2 with OrcidWork

use of org.orcid.jaxb.model.message.OrcidWork in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testUpdateWithNewWork.

@Test
@Transactional
public void testUpdateWithNewWork() {
    SecurityContextTestUtils.setUpSecurityContext("4444-4444-4444-4446", ScopePathType.ORCID_WORKS_UPDATE);
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidMessage.setOrcidProfile(orcidProfile);
    orcidProfile.setOrcidIdentifier(new OrcidIdentifier("4444-4444-4444-4446"));
    OrcidActivities orcidActivities = new OrcidActivities();
    orcidProfile.setOrcidActivities(orcidActivities);
    OrcidWorks orcidWorks = new OrcidWorks();
    orcidActivities.setOrcidWorks(orcidWorks);
    OrcidWork orcidWork = new OrcidWork();
    orcidWorks.getOrcidWork().add(orcidWork);
    WorkTitle workTitle = new WorkTitle();
    workTitle.setTitle(new Title("Added by works update"));
    orcidWork.setWorkTitle(workTitle);
    orcidWork.setWorkType(WorkType.ARTISTIC_PERFORMANCE);
    WorkExternalIdentifiers workExternalIdentifiers = new WorkExternalIdentifiers();
    WorkExternalIdentifier wei = new WorkExternalIdentifier();
    wei.setWorkExternalIdentifierType(WorkExternalIdentifierType.DOI);
    wei.setWorkExternalIdentifierId(new WorkExternalIdentifierId("abc123"));
    workExternalIdentifiers.getWorkExternalIdentifier().add(wei);
    orcidWork.setWorkExternalIdentifiers(workExternalIdentifiers);
    Response response = t2OrcidApiServiceDelegator.updateWorks(mockedUriInfo, "4444-4444-4444-4446", orcidMessage);
    assertNotNull(response);
    OrcidProfile retrievedProfile = orcidProfileManager.retrieveOrcidProfile("4444-4444-4444-4446");
    List<OrcidWork> retreivedWorksList = retrievedProfile.getOrcidActivities().getOrcidWorks().getOrcidWork();
    boolean foundWorkFromAnotherSource = false;
    boolean foundExisting = false;
    boolean foundNew = false;
    boolean foundExistingPrivate = false;
    // another source
    for (OrcidWork retrievedWork : retreivedWorksList) {
        if ("6".equals(retrievedWork.getPutCode())) {
            assertEquals("Journal article B", retrievedWork.getWorkTitle().getTitle().getContent());
            assertEquals(Visibility.LIMITED, retrievedWork.getVisibility());
            foundWorkFromAnotherSource = true;
        } else if ("7".equals(retrievedWork.getPutCode())) {
            // Existing private work
            assertEquals("Journal article C", retrievedWork.getWorkTitle().getTitle().getContent());
            assertEquals(Visibility.PRIVATE, retrievedWork.getVisibility());
            foundExisting = true;
        } else if ("8".equals(retrievedWork.getPutCode())) {
            // Existing private work added by the user
            assertEquals("Journal article D", retrievedWork.getWorkTitle().getTitle().getContent());
            assertEquals(Visibility.PRIVATE, retrievedWork.getVisibility());
            foundExistingPrivate = true;
        } else {
            // The added work
            assertEquals("Added by works update", retrievedWork.getWorkTitle().getTitle().getContent());
            foundNew = true;
        }
    }
    assertTrue("Work from other source should be there", foundWorkFromAnotherSource);
    assertTrue("New work should be there", foundNew);
    assertTrue("Existing private work should be there", foundExisting);
    assertTrue("Existing private work added by the user should be there", foundExistingPrivate);
    assertEquals(4, retreivedWorksList.size());
}
Also used : OrcidWork(org.orcid.jaxb.model.message.OrcidWork) WorkExternalIdentifierId(org.orcid.jaxb.model.message.WorkExternalIdentifierId) Title(org.orcid.jaxb.model.message.Title) WorkTitle(org.orcid.jaxb.model.message.WorkTitle) FundingTitle(org.orcid.jaxb.model.message.FundingTitle) OrcidActivities(org.orcid.jaxb.model.message.OrcidActivities) OrcidWorks(org.orcid.jaxb.model.message.OrcidWorks) OrcidProfile(org.orcid.jaxb.model.message.OrcidProfile) Response(javax.ws.rs.core.Response) WorkExternalIdentifiers(org.orcid.jaxb.model.message.WorkExternalIdentifiers) WorkTitle(org.orcid.jaxb.model.message.WorkTitle) OrcidIdentifier(org.orcid.jaxb.model.message.OrcidIdentifier) OrcidMessage(org.orcid.jaxb.model.message.OrcidMessage) WorkExternalIdentifier(org.orcid.jaxb.model.message.WorkExternalIdentifier) DBUnitTest(org.orcid.test.DBUnitTest) Test(org.junit.Test) Transactional(org.springframework.transaction.annotation.Transactional)

Example 3 with OrcidWork

use of org.orcid.jaxb.model.message.OrcidWork in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testUpdateWorkWhenNotSource.

@Test(expected = WrongSourceException.class)
@Transactional
public void testUpdateWorkWhenNotSource() {
    SecurityContextTestUtils.setUpSecurityContext("4444-4444-4444-4446", ScopePathType.ORCID_WORKS_UPDATE);
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidMessage.setOrcidProfile(orcidProfile);
    orcidProfile.setOrcidIdentifier(new OrcidIdentifier("4444-4444-4444-4446"));
    OrcidActivities orcidActivities = new OrcidActivities();
    orcidProfile.setOrcidActivities(orcidActivities);
    OrcidWorks orcidWorks = new OrcidWorks();
    orcidActivities.setOrcidWorks(orcidWorks);
    OrcidWork orcidWork = new OrcidWork();
    orcidWorks.getOrcidWork().add(orcidWork);
    orcidWork.setPutCode("6");
    WorkTitle workTitle = new WorkTitle();
    workTitle.setTitle(new Title("Updated by works update"));
    orcidWork.setWorkTitle(workTitle);
    orcidWork.setWorkType(WorkType.ARTISTIC_PERFORMANCE);
    WorkExternalIdentifiers workExternalIdentifiers = new WorkExternalIdentifiers();
    WorkExternalIdentifier wei = new WorkExternalIdentifier();
    wei.setWorkExternalIdentifierType(WorkExternalIdentifierType.DOI);
    wei.setWorkExternalIdentifierId(new WorkExternalIdentifierId("abc123"));
    workExternalIdentifiers.getWorkExternalIdentifier().add(wei);
    orcidWork.setWorkExternalIdentifiers(workExternalIdentifiers);
    t2OrcidApiServiceDelegator.updateWorks(mockedUriInfo, "4444-4444-4444-4446", orcidMessage);
}
Also used : OrcidProfile(org.orcid.jaxb.model.message.OrcidProfile) WorkExternalIdentifiers(org.orcid.jaxb.model.message.WorkExternalIdentifiers) WorkTitle(org.orcid.jaxb.model.message.WorkTitle) OrcidIdentifier(org.orcid.jaxb.model.message.OrcidIdentifier) OrcidMessage(org.orcid.jaxb.model.message.OrcidMessage) OrcidWork(org.orcid.jaxb.model.message.OrcidWork) WorkExternalIdentifierId(org.orcid.jaxb.model.message.WorkExternalIdentifierId) Title(org.orcid.jaxb.model.message.Title) WorkTitle(org.orcid.jaxb.model.message.WorkTitle) FundingTitle(org.orcid.jaxb.model.message.FundingTitle) WorkExternalIdentifier(org.orcid.jaxb.model.message.WorkExternalIdentifier) OrcidActivities(org.orcid.jaxb.model.message.OrcidActivities) OrcidWorks(org.orcid.jaxb.model.message.OrcidWorks) DBUnitTest(org.orcid.test.DBUnitTest) Test(org.junit.Test) Transactional(org.springframework.transaction.annotation.Transactional)

Example 4 with OrcidWork

use of org.orcid.jaxb.model.message.OrcidWork in project ORCID-Source by ORCID.

the class FindOrcidWorkDuplicates method deriveOrcidData.

private StringBuffer deriveOrcidData(String orcid, boolean definitive, List<OrcidWork> orcidWorks) {
    StringBuffer duplicationString = new StringBuffer();
    String definitiveIdentifier = definitive ? "Definitive" : "Duplicate";
    for (OrcidWork duplicate : orcidWorks) {
        String putCode = duplicate.getPutCode();
        String title = duplicate.getWorkTitle() != null && duplicate.getWorkTitle().getTitle() != null && StringUtils.isNotBlank(duplicate.getWorkTitle().getTitle().getContent()) ? duplicate.getWorkTitle().getTitle().getContent() : MISSING_ENTRY;
        String visibility = duplicate.getVisibility() != null ? duplicate.getVisibility().value() : MISSING_ENTRY;
        duplicationString.append(orcid).append(SEPERATOR);
        duplicationString.append(definitiveIdentifier).append(SEPERATOR);
        duplicationString.append(putCode).append(SEPERATOR);
        duplicationString.append(title).append(SEPERATOR);
        duplicationString.append(visibility).append(SEPERATOR);
        duplicationString.append(NEW_LINE);
    }
    return duplicationString;
}
Also used : OrcidWork(org.orcid.jaxb.model.message.OrcidWork)

Example 5 with OrcidWork

use of org.orcid.jaxb.model.message.OrcidWork in project ORCID-Source by ORCID.

the class FindOrcidWorkDuplicates method splitWorksIntoDuplicateSets.

private Map<OrcidWorkMatcher, List<OrcidWork>> splitWorksIntoDuplicateSets(OrcidWorks orcidWorks) {
    // do any works match, bar the put code and visibility
    Map<OrcidWorkMatcher, List<OrcidWork>> orcidWorksAsDupes = new HashMap<OrcidWorkMatcher, List<OrcidWork>>();
    // for each work associated with a profile
    for (OrcidWork orcidWork : orcidWorks.getOrcidWork()) {
        OrcidWorkMatcher orcidMatcherKey = new OrcidWorkMatcher(orcidWork);
        // does anything exist in the map for that key
        if (orcidWorksAsDupes.containsKey(orcidMatcherKey)) {
            // if so get the map and add
            List<OrcidWork> existingDupesForWork = orcidWorksAsDupes.get(orcidMatcherKey);
            existingDupesForWork.add(orcidWork);
            orcidWorksAsDupes.put(orcidMatcherKey, existingDupesForWork);
        } else {
            // if not build a new list - may be adding duplicates for this work
            List<OrcidWork> orcidWorksForKey = new ArrayList<OrcidWork>();
            orcidWorksForKey.add(orcidWork);
            orcidWorksAsDupes.put(orcidMatcherKey, orcidWorksForKey);
        }
    }
    return orcidWorksAsDupes;
}
Also used : HashMap(java.util.HashMap) OrcidWork(org.orcid.jaxb.model.message.OrcidWork) ArrayList(java.util.ArrayList) ArrayList(java.util.ArrayList) List(java.util.List)

Aggregations

OrcidWork (org.orcid.jaxb.model.message.OrcidWork)81 Test (org.junit.Test)44 OrcidProfile (org.orcid.jaxb.model.message.OrcidProfile)42 OrcidWorks (org.orcid.jaxb.model.message.OrcidWorks)32 Transactional (org.springframework.transaction.annotation.Transactional)26 OrcidMessage (org.orcid.jaxb.model.message.OrcidMessage)24 Title (org.orcid.jaxb.model.message.Title)23 FundingTitle (org.orcid.jaxb.model.message.FundingTitle)20 WorkTitle (org.orcid.jaxb.model.message.WorkTitle)18 OrcidActivities (org.orcid.jaxb.model.message.OrcidActivities)16 WorkExternalIdentifier (org.orcid.jaxb.model.message.WorkExternalIdentifier)16 Source (org.orcid.jaxb.model.message.Source)14 Rollback (org.springframework.test.annotation.Rollback)13 ArrayList (java.util.ArrayList)12 Funding (org.orcid.jaxb.model.message.Funding)12 WorkExternalIdentifierId (org.orcid.jaxb.model.message.WorkExternalIdentifierId)12 BaseTest (org.orcid.core.BaseTest)11 Contributor (org.orcid.jaxb.model.message.Contributor)11 WorkExternalIdentifiers (org.orcid.jaxb.model.message.WorkExternalIdentifiers)11 OrcidBio (org.orcid.jaxb.model.message.OrcidBio)10