Examples with FemNode artisynth.core.femmodels.FemNode used on opensource projects

Example 1 with FemNode

use of artisynth.core.femmodels.FemNode in project artisynth_core by artisynth.

the class MFreeFactory method cloneFem.

public static MFreeModel3d cloneFem(MFreeModel3d model, FemModel3d fem) {
    if (model == null) {
        model = new MFreeModel3d();
    }
    HashMap<FemNode3d, MFreeNode3d> nodeMap = new HashMap<FemNode3d, MFreeNode3d>();
    HashMap<MFreeNode3d, FemNode3d> nodeMapInv = new HashMap<MFreeNode3d, FemNode3d>();
    ArrayList<MFreeNode3d> nodeList = new ArrayList<MFreeNode3d>();
    // duplicate nodes
    for (FemNode3d node : fem.getNodes()) {
        MFreeNode3d mnode = new MFreeNode3d(node.getRestPosition());
        // explicit node masses
        mnode.setMassExplicit(true);
        mnode.setMass(node.getMass());
        MFreeNode3d[] deps = new MFreeNode3d[1];
        deps[0] = mnode;
        VectorNd coords = new VectorNd(new double[] { 1 });
        mnode.setDependentNodes(deps, coords);
        nodeMap.put(node, mnode);
        nodeMapInv.put(mnode, node);
        nodeList.add(mnode);
    }
    // convert surface mesh
    FemMeshComp surfaceFem = fem.getSurfaceMeshComp();
    PolygonalMesh mesh = (PolygonalMesh) surfaceFem.getMesh();
    // build mesh
    PolygonalMesh mesh2 = mesh.copy();
    // index vertices
    int idx = 0;
    for (Vertex3d vtx : mesh.getVertices()) {
        vtx.setIndex(idx++);
    }
    idx = 0;
    for (Vertex3d vtx : mesh2.getVertices()) {
        vtx.setIndex(idx++);
    }
    MFreeMeshComp surfaceMFree = new MFreeMeshComp(model, "surface");
    surfaceMFree.setMesh(mesh2);
    // manually build surface attachments
    for (Vertex3d vtx : mesh.getVertices()) {
        PointAttachment pa = surfaceFem.getAttachment(vtx.getIndex());
        if (pa instanceof PointFem3dAttachment) {
            PointFem3dAttachment pfa = (PointFem3dAttachment) pa;
            FemNode[] masters = pfa.getNodes();
            MFreeNode3d[] deps = new MFreeNode3d[masters.length];
            VectorNd coords = new VectorNd(masters.length);
            for (int j = 0; j < masters.length; j++) {
                // mlist.add (new ContactMaster (masters[j], pfa.getCoordinate(j)));
                deps[j] = nodeMap.get(masters[j]);
                coords.set(j, pfa.getCoordinate(j));
            }
            surfaceMFree.setVertexAttachment(vtx.getIndex(), coords.getBuffer(), deps);
        } else {
            PointParticleAttachment ppa = (PointParticleAttachment) pa;
            DynamicComponent[] masters = ppa.getMasters();
            MFreeNode3d[] deps = new MFreeNode3d[1];
            deps[0] = nodeMap.get(masters[0]);
            VectorNd coords = new VectorNd(new double[] { 1 });
            surfaceMFree.setVertexAttachment(vtx.getIndex(), coords.getBuffer(), deps);
        }
    }
    // integration regions by copying elements
    ArrayList<MFreeElement3d> elemList = new ArrayList<MFreeElement3d>(fem.numElements());
    HashMap<FemElement3d, MFreeElement3d> elemMap = new HashMap<FemElement3d, MFreeElement3d>(fem.numElements());
    for (FemElement3d elem : fem.getElements()) {
        MFreeNode3d[] elemNodes = new MFreeNode3d[elem.numNodes()];
        FemNode3d[] fnodes = elem.getNodes();
        for (int i = 0; i < elem.numNodes(); i++) {
            elemNodes[i] = nodeMap.get(fnodes[i]);
        }
        MFreeElement3d region = new MFreeElement3d(null, elemNodes);
        // region.setAllTermsActive(true);
        MFreeIntegrationPoint3d[] mpnts = new MFreeIntegrationPoint3d[elem.numIntegrationPoints()];
        IntegrationData3d[] mdata = new IntegrationData3d[elem.numIntegrationPoints()];
        IntegrationPoint3d[] ipnts = elem.getIntegrationPoints();
        IntegrationData3d[] idata = elem.getIntegrationData();
        for (int i = 0; i < ipnts.length; i++) {
            Point3d pos = new Point3d();
            ipnts[i].computePosition(pos, elem.getNodes());
            Vector3d[] gradU = ipnts[i].getGNs();
            ArrayList<Vector3d> grads = new ArrayList<Vector3d>();
            for (Vector3d g : gradU) {
                grads.add(g);
            }
            MFreeIntegrationPoint3d mpnt = MFreeIntegrationPoint3d.create(elemNodes, ipnts[i].getShapeWeights(), grads, ipnts[i].getWeight());
            IntegrationData3d mdat = new IntegrationData3d();
            mdat.setRestInverseJacobian(idata[i].getInvJ0(), idata[i].getDetJ0());
            mpnts[i] = mpnt;
            mdata[i] = mdat;
        }
        // set warping point
        if (region.getWarpingPoint() == null) {
            IntegrationPoint3d wpnt = elem.getWarpingPoint();
            IntegrationData3d wdat = elem.getWarpingData();
            Point3d pos = new Point3d();
            wpnt.computePosition(pos, elem.getNodes());
            // Vector3d [] gradU = wpnt.updateShapeGradient(wdat.getInvJ0());
            Vector3d[] gradU = wpnt.getGNs();
            ArrayList<Vector3d> grads = new ArrayList<Vector3d>();
            for (Vector3d g : gradU) {
                grads.add(g);
            }
            // MFreeIntegrationPoint3d mpnt =
            // MFreeIntegrationPoint3d.create(pos, deps,
            // wpnt.getShapeWeights(), grads, wpnt.getWeight()*wdat.getDetJ0());
            MFreeIntegrationPoint3d mpnt = MFreeIntegrationPoint3d.create(elemNodes, wpnt.getShapeWeights(), grads, wpnt.getWeight());
            region.setWarpingPoint(mpnt);
            IntegrationData3d wdata = new IntegrationData3d();
            wdata.setRestInverseJacobian(wdat.getInvJ0(), wdat.getDetJ0());
            region.setWarpingPoint(mpnt, wdata);
        }
        region.setIntegrationPoints(mpnts, mdata);
        elemList.add(region);
        elemMap.put(elem, region);
    }
    // add everything to model
    model.addNodes(nodeList);
    model.addElements(elemList);
    model.setSurfaceMeshComp(surfaceMFree);
    // copy properties
    model.setDensity(fem.getDensity());
    model.setParticleDamping(fem.getParticleDamping());
    model.setStiffnessDamping(fem.getStiffnessDamping());
    // copy over all masses
    for (FemNode3d node : fem.getNodes()) {
        nodeMap.get(node).setMass(node.getMass());
    }
    for (FemElement3d elem : fem.getElements()) {
        elemMap.get(elem).setMass(elem.getMass());
    }
    model.setMaterial(fem.getMaterial());
    return model;
}

Example 2 with FemNode

use of artisynth.core.femmodels.FemNode in project artisynth_core by artisynth.

the class MFreeMeshComp method buildNodeVertexMap.

protected void buildNodeVertexMap() {
    myNodeVertexMap = new HashMap<MFreeNode3d, Vertex3d>();
    myNumSingleAttachments = 0;
    for (int i = 0; i < myVertexAttachments.size(); i++) {
        PointAttachment pa = myVertexAttachments.get(i);
        if (pa instanceof PointParticleAttachment) {
            MFreeNode3d node = (MFreeNode3d) ((PointParticleAttachment) pa).getParticle();
            myNodeVertexMap.put(node, getMesh().getVertex(i));
            myNumSingleAttachments++;
        } else if (pa instanceof PointFem3dAttachment) {
            PointFem3dAttachment pfa = (PointFem3dAttachment) pa;
            for (FemNode node : pfa.getNodes()) {
                if (myNodeVertexMap.get(node) == null) {
                    myNodeVertexMap.put((MFreeNode3d) node, NO_SINGLE_VERTEX);
                }
            }
        }
    }
}

Example 3 with FemNode

use of artisynth.core.femmodels.FemNode in project artisynth_core by artisynth.

the class MFreeMeshComp method addVertexNodes.

private void addVertexNodes(HashSet<MFreeNode3d> nodes, Vertex3d vtx) {
    PointAttachment pa = getAttachment(vtx.getIndex());
    if (pa instanceof PointFem3dAttachment) {
        PointFem3dAttachment pfa = (PointFem3dAttachment) pa;
        FemNode[] masters = pfa.getNodes();
        for (int j = 0; j < masters.length; j++) {
            nodes.add((MFreeNode3d) masters[j]);
        }
    } else {
        PointParticleAttachment ppa = (PointParticleAttachment) pa;
        nodes.add((MFreeNode3d) ppa.getParticle());
    }
}

Example 4 with FemNode

use of artisynth.core.femmodels.FemNode in project artisynth_core by artisynth.

the class MFreeMeshComp method updateVertexColors.

protected void updateVertexColors() {
    if (mySurfaceRendering != SurfaceRender.Stress && mySurfaceRendering != SurfaceRender.Strain) {
        return;
    }
    if (myStressPlotRanging == Ranging.Auto) {
        myStressPlotRange.merge(myModel.getNodalPlotRange(mySurfaceRendering));
    }
    RenderProps rprops = getRenderProps();
    float alpha = (float) rprops.getAlpha();
    MeshBase mesh = getMesh();
    double sval = 0;
    for (int i = 0; i < myVertexAttachments.size(); i++) {
        PointAttachment attacher = myVertexAttachments.get(i);
        sval = 0;
        if (attacher instanceof PointFem3dAttachment) {
            PointFem3dAttachment pfa = (PointFem3dAttachment) attacher;
            FemNode[] nodes = pfa.getNodes();
            VectorNd weights = pfa.getCoordinates();
            for (int j = 0; j < nodes.length; j++) {
                if (nodes[j] instanceof MFreeNode3d) {
                    // paranoid!
                    MFreeNode3d node = (MFreeNode3d) nodes[j];
                    double w = weights.get(j);
                    if (mySurfaceRendering == SurfaceRender.Strain) {
                        sval += w * node.getVonMisesStrain();
                    } else if (mySurfaceRendering == SurfaceRender.Stress) {
                        sval += w * node.getVonMisesStress();
                    }
                }
            }
        } else if (attacher instanceof PointParticleAttachment) {
            PointParticleAttachment ppa = (PointParticleAttachment) attacher;
            MFreeNode3d node = (MFreeNode3d) ppa.getParticle();
            if (mySurfaceRendering == SurfaceRender.Strain) {
                sval = node.getVonMisesStrain();
            } else if (mySurfaceRendering == SurfaceRender.Stress) {
                sval = node.getVonMisesStress();
            }
        }
        double smin = myStressPlotRange.getLowerBound();
        double srng = myStressPlotRange.getRange();
        double c = (sval - smin) / srng;
        c = Math.max(0, Math.min(c, 1.0));
        myColorMap.getRGB(c, colorArray);
        mesh.setColor(i, colorArray[0], colorArray[1], colorArray[2], alpha);
    }
}

Example 5 with FemNode

use of artisynth.core.femmodels.FemNode in project artisynth_core by artisynth.

the class MFreeMeshComp method postscanItem.

protected boolean postscanItem(Deque<ScanToken> tokens, CompositeComponent ancestor) throws IOException {
    if (postscanAttributeName(tokens, "fem")) {
        myModel = postscanReference(tokens, MFreeModel3d.class, ancestor);
        return true;
    } else if (postscanAttributeName(tokens, "attachments")) {
        for (int i = 0; i < myVertexAttachments.size(); i++) {
            PointAttachment va = myVertexAttachments.get(i);
            FemNode[] nodes = ScanWriteUtils.postscanReferences(tokens, FemNode.class, ancestor);
            if (va instanceof PointParticleAttachment) {
                PointParticleAttachment ppa = (PointParticleAttachment) va;
                ppa.setParticle(nodes[0]);
            } else if (va instanceof PointFem3dAttachment) {
                PointFem3dAttachment pfa = (PointFem3dAttachment) va;
                double[] coords = (double[]) tokens.poll().value();
                pfa.setFromNodes(nodes, coords);
            }
        }
        buildNodeVertexMap();
        return true;
    }
    return super.postscanItem(tokens, ancestor);
}