Examples with DRSChecksum bio.terra.model.DRSChecksum used on opensource projects

Example 1 with DRSChecksum

use of bio.terra.model.DRSChecksum in project jade-data-repo by DataBiosphere.

the class DrsService method drsObjectFromFSDir.

private DRSObject drsObjectFromFSDir(FSDir fsDir, String snapshotId) {
    DRSObject dirObject = makeCommonDrsObject(fsDir, snapshotId);
    DRSChecksum drsChecksum = new DRSChecksum().type("crc32c").checksum("0");
    dirObject.size(0L).addChecksumsItem(drsChecksum).contents(makeContentsList(fsDir, snapshotId));
    return dirObject;
}

Example 2 with DRSChecksum

use of bio.terra.model.DRSChecksum in project jade-data-repo by DataBiosphere.

the class FileService method makeChecksums.

// We use the DRSChecksum model to represent the checksums in the repository
// API's FileModel to return the set of checksums for a file.
List<DRSChecksum> makeChecksums(FSItem fsItem) {
    List<DRSChecksum> checksums = new ArrayList<>();
    if (fsItem.getChecksumCrc32c() != null) {
        DRSChecksum checksumCrc32 = new DRSChecksum().checksum(fsItem.getChecksumCrc32c()).type("crc32c");
        checksums.add(checksumCrc32);
    }
    if (fsItem.getChecksumMd5() != null) {
        DRSChecksum checksumMd5 = new DRSChecksum().checksum(fsItem.getChecksumMd5()).type("md5");
        checksums.add(checksumMd5);
    }
    return checksums;
}

Example 3 with DRSChecksum

use of bio.terra.model.DRSChecksum in project jade-data-repo by DataBiosphere.

the class DrsTest method validateDrsObject.

private void validateDrsObject(DRSObject drsObject, String drsObjectId) {
    assertThat("DRS id matches", drsObject.getId(), equalTo(drsObjectId));
    assertThat("Create and update dates match", drsObject.getCreatedTime(), equalTo(drsObject.getUpdatedTime()));
    assertThat("DRS version is right", drsObject.getVersion(), equalTo("0"));
    for (DRSChecksum checksum : drsObject.getChecksums()) {
        assertTrue("checksum is md5 or crc32c", StringUtils.equals(checksum.getType(), "md5") || StringUtils.equals(checksum.getType(), "crc32c"));
    }
}

Example 4 with DRSChecksum

use of bio.terra.model.DRSChecksum in project jade-data-repo by DataBiosphere.

the class ConnectedOperations method checkSuccessfulFileLoad.

private void checkSuccessfulFileLoad(FileLoadModel fileLoadModel, FileModel fileModel, String datasetId) {
    assertThat("description matches", fileModel.getDescription(), CoreMatchers.equalTo(fileLoadModel.getDescription()));
    assertThat("mime type matches", fileModel.getFileDetail().getMimeType(), CoreMatchers.equalTo(fileLoadModel.getMimeType()));
    for (DRSChecksum checksum : fileModel.getChecksums()) {
        assertTrue("valid checksum type", (StringUtils.equals(checksum.getType(), "crc32c") || StringUtils.equals(checksum.getType(), "md5")));
    }
    logger.info("addFile datasetId:{} objectId:{}", datasetId, fileModel.getFileId());
    addFile(datasetId, fileModel.getFileId());
}