Examples with AuthenticatedUserRequest bio.terra.service.iam.AuthenticatedUserRequest used on opensource projects

Example 1 with AuthenticatedUserRequest

use of bio.terra.service.iam.AuthenticatedUserRequest in project jade-data-repo by DataBiosphere.

the class SamIam method listAuthorizedResourcesInner.

private List<UUID> listAuthorizedResourcesInner(AuthenticatedUserRequest userReq, IamResourceType iamResourceType) throws ApiException {
    ResourcesApi samResourceApi = samResourcesApi(userReq.getRequiredToken());
    List<ResourceAndAccessPolicy> resources = samResourceApi.listResourcesAndPolicies(iamResourceType.toString());
    return resources.stream().map(resource -> UUID.fromString(resource.getResourceId())).collect(Collectors.toList());
}

Example 2 with AuthenticatedUserRequest

use of bio.terra.service.iam.AuthenticatedUserRequest in project jade-data-repo by DataBiosphere.

the class JobService method submitAndWait.

// submit a new job to stairway, wait for it to finish, then return the result
// protected method intended to be called only from JobBuilder
protected <T> T submitAndWait(Class<? extends Flight> flightClass, FlightMap parameterMap, Class<T> resultClass) {
    String jobId = submit(flightClass, parameterMap);
    waitForJob(jobId);
    AuthenticatedUserRequest userReq = parameterMap.get(JobMapKeys.AUTH_USER_INFO.getKeyName(), AuthenticatedUserRequest.class);
    return retrieveJobResult(jobId, resultClass, userReq).getResult();
}

Example 3 with AuthenticatedUserRequest

use of bio.terra.service.iam.AuthenticatedUserRequest in project jade-data-repo by DataBiosphere.

the class RepositoryApiController method createSnapshot.

@Override
public ResponseEntity<JobModel> createSnapshot(@Valid @RequestBody SnapshotRequestModel snapshotRequestModel) {
    AuthenticatedUserRequest userReq = getAuthenticatedInfo();
    List<UUID> snapshotSourceDatasetIds = snapshotService.getSourceDatasetIdsFromSnapshotRequest(snapshotRequestModel);
    // TODO auth should be put into flight?
    List<UUID> unauthorized = getUnauthorizedSources(snapshotSourceDatasetIds, userReq);
    if (unauthorized.isEmpty()) {
        String jobId = snapshotService.createSnapshot(snapshotRequestModel, userReq);
        // we can retrieve the job we just created
        return jobToResponse(jobService.retrieveJob(jobId, userReq));
    }
    throw new IamUnauthorizedException("User is not authorized to create snapshots for these datasets " + unauthorized);
}

Example 4 with AuthenticatedUserRequest

use of bio.terra.service.iam.AuthenticatedUserRequest in project jade-data-repo by DataBiosphere.

the class RepositoryApiController method ingestFile.

@Override
public ResponseEntity<JobModel> ingestFile(@PathVariable("id") String id, @Valid @RequestBody FileLoadModel ingestFile) {
    AuthenticatedUserRequest userReq = getAuthenticatedInfo();
    iamService.verifyAuthorization(userReq, IamResourceType.DATASET, id, IamAction.INGEST_DATA);
    String jobId = fileService.ingestFile(id, ingestFile, userReq);
    // we can retrieve the job we just created
    return jobToResponse(jobService.retrieveJob(jobId, userReq));
}

Example 5 with AuthenticatedUserRequest

use of bio.terra.service.iam.AuthenticatedUserRequest in project jade-data-repo by DataBiosphere.

the class RepositoryApiController method deleteSnapshot.

@Override
public ResponseEntity<JobModel> deleteSnapshot(@PathVariable("id") String id) {
    AuthenticatedUserRequest userReq = getAuthenticatedInfo();
    iamService.verifyAuthorization(userReq, IamResourceType.DATASNAPSHOT, id, IamAction.DELETE);
    String jobId = snapshotService.deleteSnapshot(UUID.fromString(id), userReq);
    // we can retrieve the job we just created
    return jobToResponse(jobService.retrieveJob(jobId, userReq));
}