Examples with Immunization ca.uhn.fhir.model.dstu2.resource.Immunization used on opensource projects

Example 1 with Immunization

use of ca.uhn.fhir.model.dstu2.resource.Immunization in project eCRNow by drajer-health.

the class Dstu2CdaImmunizationGenerator method generateImmunizationSection.

public static String generateImmunizationSection(Dstu2FhirData data, LaunchDetails details) {
    StringBuilder sb = new StringBuilder(2000);
    List<Immunization> imms = data.getImmunizations();
    if (imms != null && imms.size() > 0) {
        // Generate the component and section end tags
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.COMP_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.SECTION_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.IMMUNIZATION_SEC_TEMPLATE_ID));
        sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.IMMUNIZATION_SEC_TEMPLATE_ID, CdaGeneratorConstants.IMMUNIZATION_SEC_TEMPLATE_ID_EXT));
        sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.CODE_EL_NAME, CdaGeneratorConstants.IMMUNIZATION_SEC_CODE, CdaGeneratorConstants.LOINC_CODESYSTEM_OID, CdaGeneratorConstants.LOINC_CODESYSTEM_NAME, CdaGeneratorConstants.IMMUNIZATION_SEC_NAME));
        // add Title
        sb.append(CdaGeneratorUtils.getXmlForText(CdaGeneratorConstants.TITLE_EL_NAME, CdaGeneratorConstants.IMMUNIZATION_SEC_TITLE));
        // add Narrative Text
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.TEXT_EL_NAME));
        // Create Table Header.
        List<String> list = new ArrayList<String>();
        list.add(CdaGeneratorConstants.IMM_TABLE_COL_1_TITLE);
        list.add(CdaGeneratorConstants.IMM_TABLE_COL_2_TITLE);
        sb.append(CdaGeneratorUtils.getXmlForTableHeader(list, CdaGeneratorConstants.TABLE_BORDER, CdaGeneratorConstants.TABLE_WIDTH));
        // add Table Body
        sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.TABLE_BODY_EL_NAME));
        // add Body Rows
        int rowNum = 1;
        for (Immunization imm : imms) {
            String medDisplayName = CdaGeneratorConstants.UNKNOWN_VALUE;
            if (imm.getVaccineCode() != null && imm.getVaccineCode().getCodingFirstRep() != null && !StringUtils.isEmpty(imm.getVaccineCode().getCodingFirstRep().getDisplay())) {
                medDisplayName = imm.getVaccineCode().getCodingFirstRep().getDisplay();
            }
            String dt = null;
            if (imm.getDate() != null) {
                dt = imm.getDate().toString();
            }
            Map<String, String> bodyvals = new HashMap<String, String>();
            bodyvals.put(CdaGeneratorConstants.IMM_TABLE_COL_1_BODY_CONTENT, medDisplayName);
            bodyvals.put(CdaGeneratorConstants.IMM_TABLE_COL_2_BODY_CONTENT, dt);
            sb.append(CdaGeneratorUtils.addTableRow(bodyvals, rowNum));
            // TODO: ++rowNum or rowNum++
            ++rowNum;
        }
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.TABLE_BODY_EL_NAME));
        // End Table.
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.TABLE_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.TEXT_EL_NAME));
        for (Immunization imm : imms) {
            // add the Entries.
            sb.append(CdaGeneratorUtils.getXmlForActEntry(CdaGeneratorConstants.TYPE_CODE_DEF));
            // add the medication Act
            sb.append(CdaGeneratorUtils.getXmlForAct(CdaGeneratorConstants.MED_ACT_EL_NAME, CdaGeneratorConstants.MED_CLASS_CODE, CdaGeneratorConstants.MOOD_CODE_DEF));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.IMMUNIZATION_ACTIVITY_TEMPLATE_ID));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.IMMUNIZATION_ACTIVITY_TEMPLATE_ID, CdaGeneratorConstants.IMMUNIZATION_ACTIVITY_TEMPLATE_ID_EXT));
            sb.append(CdaGeneratorUtils.getXmlForII(details.getAssigningAuthorityId(), imm.getId().getIdPart()));
            // set status code
            sb.append(CdaGeneratorUtils.getXmlForCD(CdaGeneratorConstants.STATUS_CODE_EL_NAME, CdaGeneratorConstants.COMPLETED_STATUS));
            // Set up Effective Time for start and End time.
            sb.append(Dstu2CdaFhirUtilities.getDateTimeTypeXml(imm.getDateElement(), CdaGeneratorConstants.EFF_TIME_EL_NAME));
            // add the consumable presentation.
            sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.CONSUMABLE_EL_NAME));
            sb.append(CdaGeneratorUtils.getXmlForStartElementWithClassCode(CdaGeneratorConstants.MAN_PROD_EL_NAME, CdaGeneratorConstants.MANU_CLASS_CODE));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.IMMUNIZATION_MEDICATION_INFORMATION));
            sb.append(CdaGeneratorUtils.getXmlForTemplateId(CdaGeneratorConstants.IMMUNIZATION_MEDICATION_INFORMATION, CdaGeneratorConstants.IMMUNIZATION_MEDICATION_INFORMATION_EXT));
            sb.append(CdaGeneratorUtils.getXmlForIIUsingGuid());
            sb.append(CdaGeneratorUtils.getXmlForStartElement(CdaGeneratorConstants.MANU_MAT_EL_NAME));
            List<CodeableConceptDt> cds = new ArrayList<CodeableConceptDt>();
            cds.add(imm.getVaccineCode());
            sb.append(Dstu2CdaFhirUtilities.getCodeableConceptXml(cds, CdaGeneratorConstants.CODE_EL_NAME, false));
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.MANU_MAT_EL_NAME));
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.MAN_PROD_EL_NAME));
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.CONSUMABLE_EL_NAME));
            // End Tags for Entries
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.MED_ACT_EL_NAME));
            sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.ENTRY_EL_NAME));
        }
        // Complete the section end tags.
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.SECTION_EL_NAME));
        sb.append(CdaGeneratorUtils.getXmlForEndElement(CdaGeneratorConstants.COMP_EL_NAME));
    } else {
        sb.append(generateEmptyImmunizations());
    }
    return sb.toString();
}

Example 2 with Immunization

use of ca.uhn.fhir.model.dstu2.resource.Immunization in project eCRNow by drajer-health.

the class Dstu2CdaEicrGenerator method convertDstu2FhirBundletoCdaEicr.

public static String convertDstu2FhirBundletoCdaEicr(Dstu2FhirData data, LaunchDetails details, Eicr ecr) {
    StringBuilder eICR = new StringBuilder();
    if (data != null) {
        Bundle bundle = data.getData();
        if (bundle != null) {
            List<Entry> entries = bundle.getEntry();
            for (Entry ent : entries) {
                // Populate data ..this can be moved to the APIs where the bundle is getting created.
                if (ent.getResource() instanceof Patient) {
                    logger.info(" Bundle contains Patient ");
                    data.setPatient((Patient) ent.getResource());
                } else if (ent.getResource() instanceof Practitioner) {
                    logger.info(" Bundle contains Practitioner ");
                    data.setPractitioner((Practitioner) ent.getResource());
                } else if (ent.getResource() instanceof Encounter) {
                    logger.info(" Bundle contains Encounter ");
                    data.setEncounter((Encounter) ent.getResource());
                } else if (ent.getResource() instanceof Location) {
                    logger.info(" Bundle contains Location ");
                    data.setLocation((Location) ent.getResource());
                } else if (ent.getResource() instanceof Organization) {
                    logger.info(" Bundle contains Organization ");
                    data.setOrganization((Organization) ent.getResource());
                } else if (ent.getResource() instanceof Condition) {
                    logger.info(" Bundle contains Condition ");
                    data.getConditions().add((Condition) ent.getResource());
                } else if (ent.getResource() instanceof Observation) {
                    Observation obs = (Observation) ent.getResource();
                    if (obs.getCategory() != null && obs.getCategory().getCodingFirstRep() != null && obs.getCategory().getCodingFirstRep().getCode() != null && obs.getCategory().getCodingFirstRep().getCode().contentEquals(CdaGeneratorConstants.FHIR_LAB_RESULT_CATEGORY)) {
                        logger.info(" Bundle contains Lab Results ");
                        data.getLabResults().add((Observation) ent.getResource());
                    } else if (obs.getCategory() != null && obs.getCategory().getCodingFirstRep() != null && obs.getCategory().getCodingFirstRep().getCode() != null) {
                        logger.info("Code for Observation Category =  " + obs.getCategory().getCodingFirstRep().getCode());
                    }
                // Compare Code for Travel Obs
                // Compare Codes for Pregnancy Obs and sort it out.
                } else if (ent.getResource() instanceof DiagnosticReport) {
                    logger.info(" Bundle contains Diagnostic Report ");
                    data.getDiagReports().add((DiagnosticReport) ent.getResource());
                } else if (ent.getResource() instanceof DiagnosticOrder) {
                    logger.info(" Bundle contains Diagnostic Order ");
                    data.getDiagOrders().add((DiagnosticOrder) ent.getResource());
                } else if (ent.getResource() instanceof MedicationStatement) {
                    logger.info(" Bundle contains MedicationStatement ");
                    data.getMedications().add((MedicationStatement) ent.getResource());
                } else if (ent.getResource() instanceof Immunization) {
                    logger.info(" Bundle contains Immunization ");
                    data.getImmunizations().add((Immunization) ent.getResource());
                }
            }
            eICR.append(Dstu2CdaHeaderGenerator.createCdaHeader(data, details));
            eICR.append(Dstu2CdaBodyGenerator.generateCdaBody(data, details));
            eICR.append(CdaGeneratorUtils.getEndXMLHeaderForCdaDocument());
        }
    } else {
        logger.error(" No Fhir Bundle Available to create CDA Documents ");
    }
    return eICR.toString();
}

Example 3 with Immunization

use of ca.uhn.fhir.model.dstu2.resource.Immunization in project eCRNow by drajer-health.

the class LoadingQueryDstu2Bundle method createDSTU2Bundle.

public Bundle createDSTU2Bundle(LaunchDetails launchDetails, Dstu2FhirData dstu2FhirData, Date start, Date end) {
    Bundle bundle = new Bundle();
    logger.info("Initializing FHIR Context for Version:::: {}", launchDetails.getFhirVersion());
    FhirContext context = fhirContextInitializer.getFhirContext(launchDetails.getFhirVersion());
    logger.info("Initializing Client");
    IGenericClient client = fhirContextInitializer.createClient(context, launchDetails);
    // GET Patient Details and Add to Bundle
    try {
        logger.info("Get Patient Data");
        Patient patient = (Patient) fhirContextInitializer.getResouceById(launchDetails, client, context, "Patient", launchDetails.getLaunchPatientId());
        Entry patientEntry = new Entry();
        patientEntry.setResource(patient);
        bundle.addEntry(patientEntry);
    } catch (Exception e) {
        logger.error("Error in getting Patient Data", e);
    }
    // Step 1: Get Encounters for Patient based on encId. (Create a method to get
    // encounters)
    // If encId is null, find encounters for patient within the start and end time
    // provided.
    // Add to the bundle.
    // As you are adding to the bundle within Fhir Data, add the codeable concept
    // also to the list of encounterCodes.
    Encounter encounter = null;
    try {
        logger.info("Get Encounter Data");
        encounter = dstu2ResourcesData.getEncounterData(context, client, launchDetails, dstu2FhirData, start, end);
        if (encounter.getParticipant() != null) {
            List<Participant> participants = encounter.getParticipant();
            for (Participant participant : participants) {
                if (participant.getIndividual() != null) {
                    ResourceReferenceDt practitionerReference = participant.getIndividual();
                    Practitioner practitioner = (Practitioner) fhirContextInitializer.getResouceById(launchDetails, client, context, "Practitioner", practitionerReference.getReference().getIdPart());
                    Entry practitionerEntry = new Entry().setResource(practitioner);
                    bundle.addEntry(practitionerEntry);
                }
            }
        }
        if (encounter.getServiceProvider() != null) {
            ResourceReferenceDt organizationReference = encounter.getServiceProvider();
            Organization organization = (Organization) fhirContextInitializer.getResouceById(launchDetails, client, context, "Organization", organizationReference.getReference().getIdPart());
            Entry organizationEntry = new Entry().setResource(organization);
            bundle.addEntry(organizationEntry);
        }
        if (encounter.getLocation() != null) {
            List<Location> enocunterLocations = encounter.getLocation();
            for (Location location : enocunterLocations) {
                if (location.getLocation() != null) {
                    ResourceReferenceDt locationReference = location.getLocation();
                    ca.uhn.fhir.model.dstu2.resource.Location locationResource = (ca.uhn.fhir.model.dstu2.resource.Location) fhirContextInitializer.getResouceById(launchDetails, client, context, "Location", locationReference.getReference().getIdPart());
                    Entry locationEntry = new Entry().setResource(locationResource);
                    bundle.addEntry(locationEntry);
                }
            }
        }
        Entry encounterEntry = new Entry().setResource(encounter);
        bundle.addEntry(encounterEntry);
    } catch (Exception e) {
        logger.error("Error in getting Encounter Data", e);
    }
    // also to the list of ConditionCodes.
    try {
        logger.info("Get Condition Data");
        List<Condition> conditionsList = dstu2ResourcesData.getConditionData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered ConditionsList----> {}", conditionsList.size());
        dstu2FhirData.setConditions(conditionsList);
        for (Condition condition : conditionsList) {
            Entry conditionsEntry = new Entry().setResource(condition);
            bundle.addEntry(conditionsEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting Condition Data", e);
    }
    // also to the list of labResultCodes.
    try {
        logger.info("Get Observation Data");
        List<Observation> observationList = dstu2ResourcesData.getObservationData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered Observations----> {}", observationList.size());
        dstu2FhirData.setLabResults(observationList);
        for (Observation observation : observationList) {
            Entry observationsEntry = new Entry().setResource(observation);
            bundle.addEntry(observationsEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting Observation Data", e);
    }
    // Get Pregnancy Observations
    try {
        logger.info("Get Pregnancy Observation Data");
        List<Observation> observationList = dstu2ResourcesData.getPregnancyObservationData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered Observations----> {}", observationList.size());
        dstu2FhirData.setPregnancyObs(observationList);
        for (Observation observation : observationList) {
            Entry observationsEntry = new Entry().setResource(observation);
            bundle.addEntry(observationsEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting Pregnancy Observation Data", e);
    }
    // Get Travel Observations
    try {
        logger.info("Get Travel Observation Data");
        List<Observation> observationList = dstu2ResourcesData.getTravelObservationData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered Observations----> {}", observationList.size());
        dstu2FhirData.setTravelObs(observationList);
        for (Observation observation : observationList) {
            Entry observationsEntry = new Entry().setResource(observation);
            bundle.addEntry(observationsEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting Travel Observation Data", e);
    }
    // also to the list of medicationCodes.
    try {
        logger.info("Get MedicationAdministration Data");
        List<MedicationAdministration> medAdministrationsList = dstu2ResourcesData.getMedicationAdministrationData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered MedicationAdministration-----------> {}", medAdministrationsList.size());
        dstu2FhirData.setMedicationAdministrations(medAdministrationsList);
        for (MedicationAdministration medAdministration : medAdministrationsList) {
            if (medAdministration.getMedication() != null && !medAdministration.getMedication().isEmpty() && medAdministration.getMedication() instanceof ResourceReferenceDt) {
                BaseResourceReferenceDt medRef = (BaseResourceReferenceDt) medAdministration.getMedication();
                String medReference = medRef.getReference().getValue();
                if (medReference.startsWith("#")) {
                    BaseContainedDt medAdministrationContained = medAdministration.getContained();
                    List<Medication> containedResources = (List<Medication>) medAdministrationContained.getContainedResources();
                    if (containedResources.stream().anyMatch(resource -> resource.getIdElement().getValue().equals(medReference))) {
                        logger.info("Medication Resource exists in MedicationAdministration.contained. So no need to add again in Bundle.");
                    }
                } else {
                    logger.info("Medication Reference Found=============>");
                    Medication medication = dstu2ResourcesData.getMedicationData(context, client, launchDetails, dstu2FhirData, medReference);
                    Entry medicationEntry = new Entry().setResource(medication);
                    bundle.addEntry(medicationEntry);
                    if (medication != null) {
                        List<Medication> medicationList = new ArrayList<>();
                        medicationList.add(medication);
                        dstu2FhirData.setMedicationList(medicationList);
                    }
                }
            }
            Entry medAdministrationEntry = new Entry().setResource(medAdministration);
            bundle.addEntry(medAdministrationEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting the MedicationAdministration Data", e);
    }
    try {
        logger.info("Get MedicationStatement Data");
        List<MedicationStatement> medStatementsList = dstu2ResourcesData.getMedicationStatementData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered MedicationStatement-----------> {}", medStatementsList.size());
        for (MedicationStatement medStatement : medStatementsList) {
            Entry medStatementEntry = new Entry().setResource(medStatement);
            bundle.addEntry(medStatementEntry);
        }
        dstu2FhirData.setMedications(medStatementsList);
    } catch (Exception e) {
        logger.error("Error in getting the MedicationStatement Data", e);
    }
    try {
        logger.info("Get DiagnosticOrder Data");
        List<DiagnosticOrder> diagnosticOrdersList = dstu2ResourcesData.getDiagnosticOrderData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered DiagnosticOrders-----------> {}", diagnosticOrdersList.size());
        dstu2FhirData.setDiagOrders(diagnosticOrdersList);
        for (DiagnosticOrder diagnosticOrder : diagnosticOrdersList) {
            Entry diagnosticOrderEntry = new Entry().setResource(diagnosticOrder);
            bundle.addEntry(diagnosticOrderEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting the DiagnosticOrder Data", e);
    }
    // Add to the bundle
    try {
        List<Immunization> immunizationsList = dstu2ResourcesData.getImmunizationData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered Immunizations-----------> {}", immunizationsList.size());
        dstu2FhirData.setImmunizations(immunizationsList);
        for (Immunization immunization : immunizationsList) {
            Entry immunizationEntry = new Entry().setResource(immunization);
            bundle.addEntry(immunizationEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting the Immunization Data", e);
    }
    // Add to the bundle
    try {
        List<DiagnosticReport> diagnosticReportList = dstu2ResourcesData.getDiagnosticReportData(context, client, launchDetails, dstu2FhirData, encounter, start, end);
        logger.info("Filtered DiagnosticReports-----------> {}", diagnosticReportList.size());
        dstu2FhirData.setDiagReports(diagnosticReportList);
        for (DiagnosticReport diagnosticReport : diagnosticReportList) {
            Entry diagnosticReportEntry = new Entry().setResource(diagnosticReport);
            bundle.addEntry(diagnosticReportEntry);
        }
    } catch (Exception e) {
        logger.error("Error in getting the DiagnosticReport Data", e);
    }
    // Setting bundle to FHIR Data
    logger.info("------------------------------CodeableConcept Codes------------------------------");
    logger.info("Encounter Codes Size=====> {}", dstu2FhirData.getEncounterCodes().size());
    logger.info("Conditions Codes Size=====> {}", dstu2FhirData.getConditionCodes().size());
    logger.info("Observation Codes Size=====> {}", dstu2FhirData.getLabResultCodes().size());
    logger.info("Medication Codes Size=====> {}", dstu2FhirData.getMedicationCodes().size());
    logger.info("Immunization Codes Size=====> {}", dstu2FhirData.getImmuniationCodes().size());
    logger.info("DiagnosticReport Codes Size=====> {}", dstu2FhirData.getDiagnosticReportCodes().size());
    String fileName = ActionRepo.getInstance().getLogFileDirectory() + "/LoadingQueryDSTU2Bundle-" + launchDetails.getLaunchPatientId() + ".json";
    ApplicationUtils.saveDataToFile(context.newJsonParser().encodeResourceToString(bundle), fileName);
    return bundle;
}

Example 4 with Immunization

use of ca.uhn.fhir.model.dstu2.resource.Immunization in project synthea by synthetichealth.

the class FhirDstu2 method convertToFHIR.

/**
 * Convert the given Person into a FHIR Bundle with the Patient and the
 * associated entries from their health record.
 *
 * @param person Person to generate the FHIR Bundle
 * @param stopTime Time the simulation ended
 * @return String containing a FHIR Bundle containing the Person's health record
 */
public static Bundle convertToFHIR(Person person, long stopTime) {
    Bundle bundle = new Bundle();
    if (TRANSACTION_BUNDLE) {
        bundle.setType(BundleTypeEnum.TRANSACTION);
    } else {
        bundle.setType(BundleTypeEnum.COLLECTION);
    }
    Entry personEntry = basicInfo(person, bundle, stopTime);
    for (Encounter encounter : person.record.encounters) {
        Entry encounterEntry = encounter(person, personEntry, bundle, encounter);
        for (HealthRecord.Entry condition : encounter.conditions) {
            condition(person, personEntry, bundle, encounterEntry, condition);
        }
        for (HealthRecord.Entry allergy : encounter.allergies) {
            allergy(person, personEntry, bundle, encounterEntry, allergy);
        }
        for (Observation observation : encounter.observations) {
            // Observation resources in stu3 don't support Attachments
            if (observation.value instanceof Attachment) {
                media(person, personEntry, bundle, encounterEntry, observation);
            } else {
                observation(person, personEntry, bundle, encounterEntry, observation);
            }
        }
        for (Procedure procedure : encounter.procedures) {
            procedure(person, personEntry, bundle, encounterEntry, procedure);
        }
        for (Medication medication : encounter.medications) {
            medication(person, personEntry, bundle, encounterEntry, medication);
        }
        for (HealthRecord.Entry immunization : encounter.immunizations) {
            immunization(person, personEntry, bundle, encounterEntry, immunization);
        }
        for (Report report : encounter.reports) {
            report(person, personEntry, bundle, encounterEntry, report);
        }
        for (CarePlan careplan : encounter.careplans) {
            careplan(person, personEntry, bundle, encounterEntry, careplan);
        }
        for (ImagingStudy imagingStudy : encounter.imagingStudies) {
            imagingStudy(person, personEntry, bundle, encounterEntry, imagingStudy);
        }
        for (HealthRecord.Device device : encounter.devices) {
            device(person, personEntry, bundle, device);
        }
        for (HealthRecord.Supply supply : encounter.supplies) {
            supplyDelivery(person, personEntry, bundle, supply, encounter);
        }
        // one claim per encounter
        encounterClaim(person, personEntry, bundle, encounterEntry, encounter.claim);
    }
    return bundle;
}

Example 5 with Immunization

use of ca.uhn.fhir.model.dstu2.resource.Immunization in project synthea by synthetichealth.

the class FhirDstu2 method immunization.

private static Entry immunization(RandomNumberGenerator rand, Entry personEntry, Bundle bundle, Entry encounterEntry, HealthRecord.Entry immunization) {
    Immunization immResource = new Immunization();
    immResource.setStatus("completed");
    immResource.setDate(new DateTimeDt(new Date(immunization.start)));
    immResource.setVaccineCode(mapCodeToCodeableConcept(immunization.codes.get(0), CVX_URI));
    immResource.setReported(new BooleanDt(false));
    immResource.setWasNotGiven(false);
    immResource.setPatient(new ResourceReferenceDt(personEntry.getFullUrl()));
    immResource.setEncounter(new ResourceReferenceDt(encounterEntry.getFullUrl()));
    Entry immunizationEntry = newEntry(rand, bundle, immResource);
    immunization.fullUrl = immunizationEntry.getFullUrl();
    return immunizationEntry;
}