Examples with ChildWindow cbit.vcell.client.ChildWindowManager.ChildWindow used on opensource projects

Example 31 with ChildWindow

use of cbit.vcell.client.ChildWindowManager.ChildWindow in project vcell by virtualcell.

the class PDEDataViewer method showSpatialPlot.

/**
 * Comment
 */
private void showSpatialPlot() {
    // check selections
    final SpatialSelection[] sl = getPDEDataContextPanel1().fetchSpatialSelections(false, true);
    if (sl == null) {
        PopupGenerator.showErrorDialog(this, "Nothing selected!");
        return;
    }
    for (int i = 0; i < sl.length; i++) {
        if (sl[i].isPoint()) {
            PopupGenerator.showErrorDialog(this, "One or more selections are single points - no spatial plot will be produced for those selections");
            break;
        }
    }
    final String varName = getPdeDataContext().getVariableName();
    final double timePoint = getPdeDataContext().getTimePoint();
    final SymbolTableEntry[] symbolTableEntries = new SymbolTableEntry[1];
    if (getSimulation() != null && getSimulation().getMathDescription() != null) {
        symbolTableEntries[0] = getSimulation().getMathDescription().getEntry(varName);
    }
    if (symbolTableEntries[0] == null) {
        // TODO domain
        Domain domain = null;
        symbolTableEntries[0] = new VolVariable(varName, domain);
    }
    AsynchClientTask task1 = new AsynchClientTask("Retrieving spatial series for variable '" + varName, AsynchClientTask.TASKTYPE_NONSWING_BLOCKING) {

        @Override
        public void run(Hashtable<String, Object> hashTable) throws Exception {
            // get plots, ignoring points
            PlotData[] plotDatas = new PlotData[sl.length];
            for (int i = 0; i < sl.length; i++) {
                PlotData plotData = null;
                if (getPdeDataContext() instanceof PDEDataViewerPostProcess.PostProcessDataPDEDataContext) {
                    SpatialSelectionVolume ssVolume = (SpatialSelectionVolume) sl[i];
                    SpatialSelection.SSHelper ssvHelper = ssVolume.getIndexSamples(0.0, 1.0);
                    ssvHelper.initializeValues_VOLUME(getPdeDataContext().getDataValues());
                    double[] values = ssvHelper.getSampledValues();
                    plotData = new PlotData(ssvHelper.getWorldCoordinateLengths(), values);
                } else {
                    plotData = getPdeDataContext().getLineScan(varName, timePoint, sl[i]);
                }
                plotDatas[i] = plotData;
            }
            hashTable.put("plotDatas", plotDatas);
        }
    };
    AsynchClientTask task2 = new AsynchClientTask("Showing spatial plot for variable" + varName, AsynchClientTask.TASKTYPE_SWING_BLOCKING) {

        @Override
        public void run(Hashtable<String, Object> hashTable) throws Exception {
            PlotData[] plotDatas = (PlotData[]) hashTable.get("plotDatas");
            for (PlotData plotData : plotDatas) {
                if (plotData != null) {
                    PlotPane plotPane = new PlotPane();
                    Plot2D plot2D = new Plot2D(symbolTableEntries, getSimulationModelInfo().getDataSymbolMetadataResolver(), new String[] { varName }, new PlotData[] { plotData }, new String[] { "Values along curve", "Distance (\u00b5m)", "[" + varName + "]" });
                    plotPane.setPlot2D(plot2D);
                    String title = createContextTitle(PDEDataViewer.this.isPostProcess(), "Spatial Plot:'" + varName + "' ", getPdeDataContext(), getSimulationModelInfo(), getSimulation());
                    ChildWindowManager childWindowManager = ChildWindowManager.findChildWindowManager(PDEDataViewer.this);
                    ChildWindow childWindow = childWindowManager.addChildWindow(plotPane, plotPane, title);
                    childWindow.setIsCenteredOnParent();
                    childWindow.pack();
                    childWindow.show();
                // System.out.println("Spatial plot requesting focus.  Result is: "+childWindow.requestFocusInWindow());
                }
            }
        }
    };
    ClientTaskDispatcher.dispatch(this, new Hashtable<String, Object>(), new AsynchClientTask[] { task1, task2 }, false);
}

Example 32 with ChildWindow

use of cbit.vcell.client.ChildWindowManager.ChildWindow in project vcell by virtualcell.

the class PDEDataViewerPostProcess method activatePanel.

public void activatePanel(boolean bActivate) {
    ChildWindowManager childWindowManager = ChildWindowManager.findChildWindowManager(postProcessPDEDataViewer);
    ChildWindow[] childwindows = childWindowManager.getAllChildWindows();
    for (int i = 0; i < childwindows.length; i++) {
        if (childwindows[i].getTitle().startsWith(PDEDataViewer.POST_PROCESS_PREFIX)) {
            // System.out.println("showing "+childwindows[i].getTitle()+" "+childwindows[i].getContentPane().getClass().getName());
            if (bActivate) {
                childwindows[i].show();
            } else {
                childwindows[i].hide();
            }
        }
    }
    if (bActivate) {
        update();
    }
}

Example 33 with ChildWindow

use of cbit.vcell.client.ChildWindowManager.ChildWindow in project vcell by virtualcell.

the class ReturnBNGOutput method validateConstraints.

private void validateConstraints(BNGOutputSpec outputSpec) {
    ValidateConstraintsPanel panel = new ValidateConstraintsPanel(owner);
    ChildWindowManager childWindowManager = ChildWindowManager.findChildWindowManager(owner);
    ChildWindow childWindow = childWindowManager.addChildWindow(panel, panel, "Apply the new constraints?");
    // 320, 160 without the warning line
    Dimension dim = new Dimension(376, 163);
    childWindow.pack();
    panel.setChildWindow(childWindow);
    childWindow.setPreferredSize(dim);
    childWindow.showModal();
    if (panel.getButtonPushed() == ValidateConstraintsPanel.ActionButtons.Apply) {
        System.out.println("pressed APPLY from task");
        TaskCallbackMessage tcm = new TaskCallbackMessage(TaskCallbackStatus.TaskEndAdjustSimulationContextFlagsOnly, "");
        owner.setNewCallbackMessage(tcm);
        String string = "Updating the network constraints with the test values.";
        System.out.println(string);
        owner.updateOutputSpecToSimulationContext(outputSpec);
        sc.getNetworkConstraints().updateConstraintsFromTest();
        tcm = new TaskCallbackMessage(TaskCallbackStatus.Notification, string);
        sc.firePropertyChange("appendToConsole", "", tcm);
        return;
    } else {
        System.out.println("pressed CANCEL from task");
        owner.updateOutputSpecToSimulationContext(null);
        TaskCallbackMessage tcm = new TaskCallbackMessage(TaskCallbackStatus.Clean, "");
        sc.appendToConsole(tcm);
        String string = "The Network constraints were not updated with the test values.";
        tcm = new TaskCallbackMessage(TaskCallbackStatus.Notification, string);
        sc.firePropertyChange("appendToConsole", "", tcm);
        // owner.refreshInterface();
        return;
    }
}

Example 34 with ChildWindow

use of cbit.vcell.client.ChildWindowManager.ChildWindow in project vcell by virtualcell.

the class BioModelWindowManager method closeMIRIAMWindow.

private void closeMIRIAMWindow() {
    ChildWindowManager childWindowManager = ChildWindowManager.findChildWindowManager(getJPanel());
    ChildWindow childWindow = childWindowManager.getChildWindowFromContext(MIRIAM_WINDOW);
    if (childWindow != null) {
        childWindow.close();
    }
}

Example 35 with ChildWindow

use of cbit.vcell.client.ChildWindowManager.ChildWindow in project vcell by virtualcell.

the class BioModelWindowManager method updateSimulationDataViewers.

/**
 * Insert the method's description here.
 * Creation date: (7/20/2004 1:13:06 PM)
 */
private void updateSimulationDataViewers(ApplicationComponents appComponents, SimulationContext found) {
    SimulationWindow[] simWindows = appComponents.getSimulationWindows();
    Simulation[] sims = found.getSimulations();
    Hashtable<VCSimulationIdentifier, Simulation> hash = new Hashtable<VCSimulationIdentifier, Simulation>();
    for (int i = 0; i < sims.length; i++) {
        SimulationInfo simInfo = sims[i].getSimulationInfo();
        if (simInfo != null) {
            VCSimulationIdentifier vcSimulationIdentifier = simInfo.getAuthoritativeVCSimulationIdentifier();
            hash.put(vcSimulationIdentifier, sims[i]);
        }
    }
    for (int i = 0; i < simWindows.length; i++) {
        SimulationWindow sw = simWindows[i];
        if (hash.containsKey(simWindows[i].getVcSimulationIdentifier())) {
            sw.resetSimulation((Simulation) hash.get(sw.getVcSimulationIdentifier()));
        } else if (sw.isShowingLocalSimulation()) {
            sw.setLocalState(LocalState.LOCAL_SIMMODFIED);
        } else {
            ChildWindowManager childWindowManager = ChildWindowManager.findChildWindowManager(getJPanel());
            ChildWindow childWindow = childWindowManager.getChildWindowFromContext(sw);
            if (childWindow != null) {
                childWindowManager.closeChildWindow(childWindow);
            }
        }
    }
}