Search in sources :

Example 1 with ParticipantMatchLabelLocal

use of cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.ParticipantMatchLabelLocal in project vcell by virtualcell.

the class RbmReactionParticipantTreeCellRenderer method getTreeCellRendererComponent.

@Override
public Component getTreeCellRendererComponent(JTree tree, Object value, boolean sel, boolean expanded, boolean leaf, int row, boolean hasFocus) {
    super.getTreeCellRendererComponent(tree, value, sel, expanded, leaf, row, hasFocus);
    setBorder(null);
    if (value instanceof BioModelNode) {
        BioModelNode node = (BioModelNode) value;
        Object userObject = node.getUserObject();
        obj = userObject;
        String text = null;
        Icon icon = null;
        String toolTip = null;
        if (userObject instanceof ReactionRule) {
            ReactionRule rr = (ReactionRule) userObject;
            text = toHtml(rr);
            toolTip = toHtmlWithTip(rr);
            icon = rr.isReversible() ? VCellIcons.rbmReactRuleReversIcon : VCellIcons.rbmReactRuleDirectIcon;
        } else if (userObject instanceof ReactionRuleParticipantLocal) {
            ReactionRuleParticipantLocal rrp = (ReactionRuleParticipantLocal) userObject;
            text = toHtml(rrp, true);
            toolTip = toHtmlWithTip(rrp, true);
            icon = rrp.type == ReactionRuleParticipantType.Reactant ? VCellIcons.rbmReactantIcon : VCellIcons.rbmProductIcon;
        } else if (userObject instanceof MolecularTypePattern) {
            MolecularTypePattern molecularTypePattern = (MolecularTypePattern) userObject;
            text = toHtml(molecularTypePattern, true);
            toolTip = toHtmlWithTip(molecularTypePattern, true);
            if (owner == null) {
                icon = VCellIcons.rbmMolecularTypeSimpleIcon;
                ;
            } else {
                Graphics gc = owner.getGraphics();
                icon = new MolecularTypeSmallShape(1, 5, molecularTypePattern.getMolecularType(), null, gc, molecularTypePattern.getMolecularType(), null, issueManager);
            }
        } else if (userObject instanceof MolecularComponentPattern) {
            MolecularComponentPattern mcp = (MolecularComponentPattern) userObject;
            text = toHtml(mcp, true);
            toolTip = toHtmlWithTip(mcp, true);
            icon = VCellIcons.rbmComponentGrayIcon;
            if (mcp.getMolecularComponent().getComponentStateDefinitions().size() > 0) {
                icon = VCellIcons.rbmComponentGrayStateIcon;
            }
            if (mcp.isbVisible()) {
                icon = VCellIcons.rbmComponentGreenIcon;
                if (mcp.getMolecularComponent().getComponentStateDefinitions().size() > 0) {
                    icon = VCellIcons.rbmComponentGreenStateIcon;
                }
            }
            ComponentStatePattern csp = mcp.getComponentStatePattern();
            if (csp != null && !csp.isAny()) {
                icon = VCellIcons.rbmComponentGreenIcon;
                if (mcp.getMolecularComponent().getComponentStateDefinitions().size() > 0) {
                    icon = VCellIcons.rbmComponentGreenStateIcon;
                }
            }
            BioModelNode parent = (BioModelNode) ((BioModelNode) value).getParent().getParent().getParent();
            if (parent == null) {
                icon = VCellIcons.rbmComponentErrorIcon;
                return this;
            }
        } else if (userObject instanceof StateLocal) {
            StateLocal sl = (StateLocal) userObject;
            text = toHtml(sl, true);
            toolTip = toHtmlWithTip(sl, true);
            icon = VCellIcons.rbmComponentStateIcon;
        } else if (userObject instanceof BondLocal) {
            BondLocal bl = (BondLocal) userObject;
            text = toHtml(bl, sel);
            toolTip = toHtmlWithTip(bl, true);
            icon = VCellIcons.rbmBondIcon;
        } else if (userObject instanceof ParticipantMatchLabelLocal) {
            ParticipantMatchLabelLocal pmll = (ParticipantMatchLabelLocal) userObject;
            text = toHtml(pmll, sel);
            toolTip = toHtmlWithTip(pmll, true);
            icon = VCellIcons.rbmBondIcon;
        } else {
            if (userObject != null) {
                System.out.println(userObject.toString());
                text = userObject.toString();
            } else {
                text = "null user object";
            }
        }
        setText(text);
        setIcon(icon);
        setToolTipText(toolTip == null ? text : toolTip);
    }
    return this;
}
Also used : ReactionRule(cbit.vcell.model.ReactionRule) MolecularComponentPattern(org.vcell.model.rbm.MolecularComponentPattern) ComponentStatePattern(org.vcell.model.rbm.ComponentStatePattern) StateLocal(cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.StateLocal) ParticipantMatchLabelLocal(cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.ParticipantMatchLabelLocal) BioModelNode(cbit.vcell.desktop.BioModelNode) Graphics(java.awt.Graphics) MolecularTypeSmallShape(cbit.vcell.graph.MolecularTypeSmallShape) BondLocal(cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.BondLocal) ReactionRuleParticipantLocal(cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.ReactionRuleParticipantLocal) Icon(javax.swing.Icon) MolecularTypePattern(org.vcell.model.rbm.MolecularTypePattern)

Aggregations

BondLocal (cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.BondLocal)1 ParticipantMatchLabelLocal (cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.ParticipantMatchLabelLocal)1 ReactionRuleParticipantLocal (cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.ReactionRuleParticipantLocal)1 StateLocal (cbit.vcell.client.desktop.biomodel.RbmDefaultTreeModel.StateLocal)1 BioModelNode (cbit.vcell.desktop.BioModelNode)1 MolecularTypeSmallShape (cbit.vcell.graph.MolecularTypeSmallShape)1 ReactionRule (cbit.vcell.model.ReactionRule)1 Graphics (java.awt.Graphics)1 Icon (javax.swing.Icon)1 ComponentStatePattern (org.vcell.model.rbm.ComponentStatePattern)1 MolecularComponentPattern (org.vcell.model.rbm.MolecularComponentPattern)1 MolecularTypePattern (org.vcell.model.rbm.MolecularTypePattern)1