use of cbit.vcell.client.desktop.biomodel.pathway.shapes.BioPaxShape in project vcell by virtualcell.
the class PathwayGraphTool method selectEventFromWorld.
private void selectEventFromWorld(Rectangle rect, boolean bShift, boolean bCntrl) {
if (!bShift && !bCntrl) {
getGraphModel().clearSelection();
List<Shape> shapes = getGraphModel().pickWorld(rect);
for (Shape shape : shapes) {
if (shape instanceof BioPaxShape) {
getGraphModel().selectShape(shape);
}
}
} else if (bShift) {
if (getGraphModel().getSelectedShape() instanceof PathwayContainerShape) {
getGraphModel().clearSelection();
}
List<Shape> shapes = getGraphModel().pickWorld(rect);
for (Shape shape : shapes) {
if (shape instanceof BioPaxShape) {
getGraphModel().selectShape(shape);
}
}
} else if (bCntrl) {
if (getGraphModel().getSelectedShape() instanceof PathwayContainerShape) {
getGraphModel().clearSelection();
}
List<Shape> shapes = getGraphModel().pickWorld(rect);
for (Shape shape : shapes) {
if (shape instanceof BioPaxShape) {
if (shape.isSelected()) {
getGraphModel().deselectShape(shape);
} else {
getGraphModel().selectShape(shape);
}
}
}
}
}
use of cbit.vcell.client.desktop.biomodel.pathway.shapes.BioPaxShape in project vcell by virtualcell.
the class GraphContainerLayoutPathways method getPreferedSizePathwayContainerShape.
public Dimension getPreferedSizePathwayContainerShape(PathwayContainerShape shape, Graphics2D g) {
// get size when empty
Font origFont = g.getFont();
g.setFont(shape.getLabelFont(g));
try {
Dimension preferredSize = shape.getPreferedSizeSelf(g);
// make larger than empty size so that children fit
for (Shape child : shape.getChildren()) {
if (child instanceof BioPaxShape) {
preferredSize.width = Math.max(preferredSize.width, child.getSpaceManager().getRelPos().x + child.getSpaceManager().getSize().width);
preferredSize.height = Math.max(preferredSize.height, child.getSpaceManager().getRelPos().y + child.getSpaceManager().getSize().height);
}
}
preferredSize.width = preferredSize.width + WIDTH_PADDING;
preferredSize.height = preferredSize.height + HEIGHT_PADDING;
if (preferredSize.width < PATHWAY_CONTAINER_MIN_SIZE.width) {
preferredSize.width = PATHWAY_CONTAINER_MIN_SIZE.width;
}
if (preferredSize.height < PATHWAY_CONTAINER_MIN_SIZE.height) {
preferredSize.height = PATHWAY_CONTAINER_MIN_SIZE.height;
}
int nNodes = shape.getChildren().size();
int minArea = nNodes * MIN_AREA_PER_NODE;
while (preferredSize.width * preferredSize.height < minArea) {
preferredSize.width += preferredSize.width / 20;
preferredSize.height += preferredSize.height / 20;
}
return preferredSize;
} finally {
g.setFont(origFont);
}
}
use of cbit.vcell.client.desktop.biomodel.pathway.shapes.BioPaxShape in project vcell by virtualcell.
the class PathwayGraphTool method mouseDragged.
@Override
public void mouseDragged(MouseEvent event) {
if ((event.getModifiers() & (InputEvent.BUTTON2_MASK | InputEvent.BUTTON3_MASK)) != 0) {
return;
}
boolean bShift = (event.getModifiers() & InputEvent.SHIFT_MASK) == InputEvent.SHIFT_MASK;
boolean bCntrl = (event.getModifiers() & InputEvent.CTRL_MASK) == InputEvent.CTRL_MASK;
try {
switch(mode) {
case SELECT:
{
Point worldPoint = screenToWorld(event.getX(), event.getY());
if (bMoving) {
List<Shape> selectedShapes = getGraphModel().getSelectedShapes();
// constrain to stay within the corresponding parent for the
// "movingShape" as well as all other selected (hence
// moving) shapes.
Point movingParentLoc = movingShape.getParent().getSpaceManager().getAbsLoc();
Dimension movingParentSize = movingShape.getParent().getSpaceManager().getSize();
worldPoint.x = Math.max(movingOffsetWorld.x + movingParentLoc.x, Math.min(movingOffsetWorld.x + movingParentLoc.x + movingParentSize.width - movingShape.getSpaceManager().getSize().width, worldPoint.x));
worldPoint.y = Math.max(movingOffsetWorld.y + movingParentLoc.y, Math.min(movingOffsetWorld.x + movingParentLoc.y + movingParentSize.height - movingShape.getSpaceManager().getSize().height, worldPoint.y));
for (Shape shape : selectedShapes) {
if (shape != movingShape && shape instanceof BioPaxShape) {
Point selectedParentLoc = shape.getParent().getSpaceManager().getAbsLoc();
Dimension selectedParentSize = shape.getParent().getSpaceManager().getSize();
int selectedMovingOffsetX = movingOffsetWorld.x + (movingShape.getSpaceManager().getAbsLoc().x - shape.getSpaceManager().getAbsLoc().x);
int selectedMovingOffsetY = movingOffsetWorld.y + (movingShape.getSpaceManager().getAbsLoc().y - shape.getSpaceManager().getAbsLoc().y);
worldPoint.x = Math.max(selectedMovingOffsetX + selectedParentLoc.x, Math.min(selectedMovingOffsetX + selectedParentLoc.x + selectedParentSize.width - shape.getSpaceManager().getSize().width, worldPoint.x));
worldPoint.y = Math.max(selectedMovingOffsetY + selectedParentLoc.y, Math.min(selectedMovingOffsetY + selectedParentLoc.y + selectedParentSize.height - shape.getSpaceManager().getSize().height, worldPoint.y));
}
}
getGraphPane().setCursor(Cursor.getPredefinedCursor(Cursor.MOVE_CURSOR));
Point newMovingPoint = new Point(worldPoint.x - movingOffsetWorld.x, worldPoint.y - movingOffsetWorld.y);
int deltaX = newMovingPoint.x - movingPointWorld.x;
int deltaY = newMovingPoint.y - movingPointWorld.y;
movingPointWorld = newMovingPoint;
movingShape.getSpaceManager().setRelPos(movingPointWorld.x - movingParentLoc.x, movingPointWorld.y - movingParentLoc.y);
// them also
for (Shape shape : selectedShapes) {
if (shape != movingShape) {
shape.getSpaceManager().move(deltaX, deltaY);
}
}
getGraphPane().invalidate();
((JViewport) getGraphPane().getParent()).revalidate();
getGraphPane().repaint();
} else if (bRectStretch) {
// constrain to stay within parent
Point parentLoc = rectShape.getParent().getSpaceManager().getAbsLoc();
Dimension parentSize = rectShape.getParent().getSpaceManager().getSize();
worldPoint.x = Math.max(1, Math.min(parentSize.width - 1, worldPoint.x - parentLoc.x)) + parentLoc.x;
worldPoint.y = Math.max(1, Math.min(parentSize.height - 1, worldPoint.y - parentLoc.y)) + parentLoc.y;
getGraphPane().setCursor(Cursor.getPredefinedCursor(Cursor.MOVE_CURSOR));
// getGraphPane().repaint();
Graphics2D g = (Graphics2D) getGraphPane().getGraphics();
AffineTransform oldTransform = g.getTransform();
g.scale(0.01 * getGraphModel().getZoomPercent(), 0.01 * getGraphModel().getZoomPercent());
g.setXORMode(Color.white);
rectShape.setEnd(endPointWorld);
rectShape.paint(g, 0, 0);
endPointWorld = worldPoint;
rectShape.setEnd(endPointWorld);
rectShape.paint(g, 0, 0);
g.setTransform(oldTransform);
} else {
Shape shape = (getGraphModel().getSelectedShape() != null ? getGraphModel().getSelectedShape() : getGraphModel().pickWorld(worldPoint));
if (!bCntrl && !bShift && shape instanceof BioPaxShape) {
bMoving = true;
movingShape = shape;
movingPointWorld = shape.getSpaceManager().getAbsLoc();
movingOffsetWorld = new Point(worldPoint.x - movingPointWorld.x, worldPoint.y - movingPointWorld.y);
} else if (shape instanceof PathwayContainerShape || bShift || bCntrl) {
bRectStretch = true;
endPointWorld = new Point(worldPoint.x + 1, worldPoint.y + 1);
rectShape = new RubberBandRectShape(worldPoint, endPointWorld, getGraphModel());
rectShape.setEnd(endPointWorld);
if (!(shape instanceof PathwayContainerShape)) {
shape.getParent().addChildShape(rectShape);
} else {
shape.addChildShape(rectShape);
}
Graphics2D g = (Graphics2D) getGraphPane().getGraphics();
AffineTransform oldTransform = g.getTransform();
g.scale(0.01 * getGraphModel().getZoomPercent(), 0.01 * getGraphModel().getZoomPercent());
g.setXORMode(Color.white);
rectShape.paint(g, 0, 0);
g.setTransform(oldTransform);
}
}
break;
}
default:
{
break;
}
}
} catch (Exception e) {
System.out.println("CartoonTool.mouseDragged: uncaught exception");
e.printStackTrace(System.out);
}
}
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