Examples with ClientServerManager cbit.vcell.client.server.ClientServerManager used on opensource projects

Example 1 with ClientServerManager

use of cbit.vcell.client.server.ClientServerManager in project vcell by virtualcell.

the class MathTestingReportGenerator method main.

public static void main(String[] args) {
    ClientServerManager clientServerManager = null;
    try {
        if (args.length != 3) {
            System.out.println("usage: MathTestingReportGenerator apihost apiport password");
            System.exit(1);
        }
        String userid = "vcelltestaccount";
        String apihost = args[0];
        Integer apiport = Integer.parseInt(args[1]);
        String password = args[2];
        clientServerManager = ClientFactory.createRemoteClientServerManager(apihost, apiport, userid, password);
        DocumentManager documentManager = clientServerManager.getDocumentManager();
        TestSuiteInfoNew[] testSuiteInfos = documentManager.getTestSuiteInfos();
        for (TestSuiteInfoNew testSuiteInfo : testSuiteInfos) {
            System.out.println(testSuiteInfo.toShortString());
        }
        // 
        // sorted by TSKey
        // 
        Arrays.sort(testSuiteInfos, new Comparator<TestSuiteInfoNew>() {

            @Override
            public int compare(TestSuiteInfoNew o1, TestSuiteInfoNew o2) {
                return o1.getTSKey().compareTo(o2.getTSKey());
            }
        });
        // 
        // print out details of the last one.
        // 
        TestSuiteNew testSuite = documentManager.getTestSuite(testSuiteInfos[testSuiteInfos.length - 1].getTSKey());
        for (TestCaseNew testCase : testSuite.getTestCases()) {
            System.out.println("TEST CASE: " + testCase.getAnnotation());
            TestCriteriaNew[] testCriterias = testCase.getTestCriterias();
            for (TestCriteriaNew testCriteria : testCriterias) {
                System.out.println("   CRITERIA: " + testCriteria.getReportStatusMessage());
                for (VariableComparisonSummary summary : testCriteria.getVarComparisonSummaries()) {
                    System.out.println("        SUMMARY: " + summary.toShortString());
                }
            }
        }
    } catch (Exception e) {
        e.printStackTrace(System.out);
    } finally {
        if (clientServerManager != null) {
            clientServerManager.cleanup();
        }
    }
}

Example 2 with ClientServerManager

use of cbit.vcell.client.server.ClientServerManager in project vcell by virtualcell.

the class VCellClient method startClient.

/**
 * Insert the method's description here.
 * Creation date: (5/5/2004 3:51:06 PM)
 * @param bioModel cbit.vcell.biomodel.BioModel
 */
public static VCellClient startClient(final VCDocument startupDoc, final ClientServerInfo clientServerInfo) {
    /* Set Look and Feel */
    VCellLookAndFeel.setVCellLookAndFeel();
    // instantiate app
    final VCellClient vcellClient = new VCellClient();
    Hashtable<String, Object> hash = new Hashtable<String, Object>();
    AsynchClientTask task1 = new AsynchClientTask("Starting Virtual Cell", AsynchClientTask.TASKTYPE_NONSWING_BLOCKING) {

        public void run(Hashtable<String, Object> hashTable) throws Exception {
            // start management layer
            InteractiveContextDefaultProvider defaultRequester = new VCellGuiInteractiveContextDefaultProvider();
            vcellClient.setClientServerManager(new ClientServerManager(clientServerInfo, defaultRequester));
            vcellClient.setRequestManager(new ClientRequestManager(vcellClient));
            vcellClient.setMdiManager(new ClientMDIManager(vcellClient.getRequestManager()));
            // start auxilliary stuff
            vcellClient.startStatusThreads();
            // make sure we have at least a blank document to start with
            if (startupDoc != null) {
                hashTable.put("startupDoc", startupDoc);
            } else {
                VCDocument newStartupDoc = ((ClientRequestManager) vcellClient.getRequestManager()).createDefaultDocument(VCDocumentType.BIOMODEL_DOC);
                hashTable.put("startupDoc", newStartupDoc);
            }
            DocumentWindowAboutBox.parseVCellVersion();
        }
    };
    AsynchClientTask task2 = new AsynchClientTask("Creating GUI", AsynchClientTask.TASKTYPE_SWING_BLOCKING) {

        public void run(Hashtable<String, Object> hashTable) throws Exception {
            // fire up the GUI
            VCDocument startupDoc = (VCDocument) hashTable.get("startupDoc");
            // needs to be set first, else throw away dirty/needs paint information stored in previous instance.
            RepaintManager.setCurrentManager(new VCellClient.CheckThreadViolationRepaintManager());
            DocumentWindowManager currWindowManager = vcellClient.createAndShowGUI(startupDoc);
            if (currWindowManager != null) {
                hashTable.put("currWindowManager", currWindowManager);
            }
            if (clientServerInfo.getUsername() == null) {
                // we were not supplied login credentials; pop-up dialog
                VCellClient.login(vcellClient.getRequestManager(), clientServerInfo, currWindowManager);
            }
        }
    };
    AsynchClientTask task3 = new AsynchClientTask("Connecting to Server", AsynchClientTask.TASKTYPE_NONSWING_BLOCKING) {

        public void run(Hashtable<String, Object> hashTable) throws Exception {
            // try server connection
            if (clientServerInfo.getUsername() != null) {
                DocumentWindowManager currWindowManager = (DocumentWindowManager) hashTable.get("currWindowManager");
                // we were not supplied login credentials; pop-up dialog
                vcellClient.getRequestManager().connectToServer(currWindowManager, clientServerInfo);
            }
        }
    };
    AsynchClientTask[] taskArray = new AsynchClientTask[] { task1, task2, task3 };
    ClientTaskDispatcher.dispatch(null, hash, taskArray);
    return vcellClient;
}

Example 3 with ClientServerManager

use of cbit.vcell.client.server.ClientServerManager in project vcell by virtualcell.

the class ReactionCartoonTool method showSaveReactionImageDialog.

// TO DO: allow user preferences for directory selection.
public void showSaveReactionImageDialog() throws Exception {
    // set file filter
    String result = DialogUtils.showInputDialog0(getDialogOwner(getGraphPane()), "Enter pixel width of saved rxdiagram image (height will be proportional)", "800");
    int width = Integer.parseInt(result);
    SimpleFilenameFilter jpgFilter = new SimpleFilenameFilter("jpg");
    final java.io.File defaultFile = new java.io.File(getModel().getName() + ".jpg");
    ClientServerManager csm = (ClientServerManager) getDocumentManager().getSessionManager();
    UserPreferences userPref = csm.getUserPreferences();
    File defaultPath = userPref.getCurrentDialogPath();
    VCFileChooser fileChooser = new VCFileChooser(defaultPath);
    fileChooser.setMultiSelectionEnabled(false);
    fileChooser.addChoosableFileFilter(jpgFilter);
    fileChooser.setSelectedFile(defaultFile);
    fileChooser.setDialogTitle("Save Image As...");
    // name once the user changes the directory.
    class FileChooserFix implements java.beans.PropertyChangeListener {

        public void propertyChange(java.beans.PropertyChangeEvent ev) {
            JFileChooser chooser = (JFileChooser) ev.getSource();
            if (JFileChooser.DIRECTORY_CHANGED_PROPERTY.equals(ev.getPropertyName())) {
                chooser.setSelectedFile(defaultFile);
            }
        }
    }
    fileChooser.addPropertyChangeListener(new FileChooserFix());
    // process user input
    if (fileChooser.showSaveDialog(getDialogOwner(getGraphPane())) == JFileChooser.APPROVE_OPTION) {
        java.io.File selectedFile = fileChooser.getSelectedFile();
        if (selectedFile != null) {
            if (selectedFile.exists()) {
                int question = javax.swing.JOptionPane.showConfirmDialog(getDialogOwner(getGraphPane()), "Overwrite file: " + selectedFile.getPath() + "?");
                if (question == javax.swing.JOptionPane.NO_OPTION || question == javax.swing.JOptionPane.CANCEL_OPTION) {
                    return;
                }
            }
            BufferedImage bufferedImage = ITextWriter.generateDocReactionsImage(this.getModel(), width);
            FileOutputStream reactionImageOutputStream = null;
            try {
                reactionImageOutputStream = new FileOutputStream(selectedFile);
                reactionImageOutputStream.write(ITextWriter.encodeJPEG(bufferedImage).toByteArray());
            } finally {
                try {
                    if (reactionImageOutputStream != null) {
                        reactionImageOutputStream.close();
                    }
                } catch (Exception e) {
                    e.printStackTrace();
                }
            }
            // reset the user preference for the default path, if needed.
            File newPath = selectedFile.getParentFile();
            if (!newPath.equals(defaultPath)) {
                userPref.setCurrentDialogPath(newPath);
            }
        }
    }
}

Example 4 with ClientServerManager

use of cbit.vcell.client.server.ClientServerManager in project vcell by virtualcell.

the class ClientFactory method createRemoteClientServerManager.

public static ClientServerManager createRemoteClientServerManager(String apihost, Integer apiport, String username, String password) {
    DigestedPassword digestedPassword = new DigestedPassword(password);
    ClientServerInfo csInfo = ClientServerInfo.createRemoteServerInfo(apihost, apiport, username, digestedPassword);
    InteractiveContextDefaultProvider defaultInteractiveContextProvider = new VCellGuiInteractiveContextDefaultProvider();
    ClientServerManager clientServerManager = new ClientServerManager(csInfo, defaultInteractiveContextProvider);
    RequestManagerAdapter requestManager = new RequestManagerAdapter();
    TopLevelWindowManager windowManager = new TopLevelWindowManager(requestManager) {

        @Override
        public Component getComponent() {
            return null;
        }

        @Override
        public String getManagerID() {
            return null;
        }

        @Override
        public boolean isRecyclable() {
            return false;
        }
    };
    InteractiveContext requester = new VCellGuiInteractiveContext(windowManager);
    clientServerManager.connect(requester);
    return clientServerManager;
}

Example 5 with ClientServerManager

use of cbit.vcell.client.server.ClientServerManager in project vcell by virtualcell.

the class ClientFactory method createLocalClientServerManager.

public static ClientServerManager createLocalClientServerManager(String userid, String password) {
    DigestedPassword digestedPassword = new DigestedPassword(password);
    ClientServerInfo csInfo = ClientServerInfo.createLocalServerInfo(userid, digestedPassword);
    InteractiveContextDefaultProvider defaultInteractiveContextProvider = new VCellGuiInteractiveContextDefaultProvider();
    ClientServerManager clientServerManager = new ClientServerManager(csInfo, defaultInteractiveContextProvider);
    clientServerManager.connect(null);
    return clientServerManager;
}