Examples with RbmObservable cbit.vcell.model.RbmObservable used on opensource projects

Example 51 with RbmObservable

use of cbit.vcell.model.RbmObservable in project vcell by virtualcell.

the class EventPanel method filterEventAssignmentVariables.

public static ArrayList<String> filterEventAssignmentVariables(SimulationContext simContext) {
    // fill comboboxmodel with possible variables from simContext (symboltable entries) list
    Map<String, SymbolTableEntry> entryMap = new HashMap<String, SymbolTableEntry>();
    simContext.getEntries(entryMap);
    ArrayList<String> varNameList = new ArrayList<String>();
    for (String varName : entryMap.keySet()) {
        SymbolTableEntry symbolTableEntry = entryMap.get(varName);
        if (/*bExcludeFuncAndReserved && */
        (symbolTableEntry instanceof SymbolTableFunctionEntry || symbolTableEntry instanceof Structure.StructureSize || symbolTableEntry instanceof Model.ReservedSymbol || symbolTableEntry instanceof RbmObservable)) {
            continue;
        }
        if (simContext.getAssignmentRule(symbolTableEntry) != null) {
            // we don't allow assignment rule variables, they'll become functions in the math
            continue;
        }
        if (symbolTableEntry instanceof Model.ModelParameter) {
            // exclude global parameters that are rate or assignment rule variables
            if (simContext.getRateRule(symbolTableEntry) != null) {
                // it's a rate rule variable, we can use it
                ;
            } else {
                Model.ModelParameter mp = (Model.ModelParameter) symbolTableEntry;
                Expression exp = mp.getExpression();
                try {
                    boolean isConstant = BioEvent.isConstantExpression(simContext, exp);
                    if (!isConstant) {
                        // System.out.println(mp.getName() + " - NO");		// skip this
                        continue;
                    }
                // System.out.println(mp.getName() + " - yes: ");
                } catch (ExpressionException e) {
                    // System.out.println(mp.getName() + " - NO");			// skip this
                    continue;
                }
            }
        }
        varNameList.add(varName);
    }
    Collections.sort(varNameList);
    return varNameList;
}