Examples with SimulationStatus cbit.vcell.server.SimulationStatus used on opensource projects

Example 1 with SimulationStatus

use of cbit.vcell.server.SimulationStatus in project vcell by virtualcell.

the class ClientRequestManager method stopSimulations.

public void stopSimulations(final ClientSimManager clientSimManager, final Simulation[] simulations) {
    // stop is single step operation, don't bother with tasks, thread inline
    AsynchClientTask task1 = new AsynchClientTask("stopping simulations", AsynchClientTask.TASKTYPE_NONSWING_BLOCKING) {

        @Override
        public void run(Hashtable<String, Object> hashTable) throws Exception {
            Hashtable<Simulation, Throwable> failures = new Hashtable<Simulation, Throwable>();
            if (simulations != null && simulations.length > 0) {
                for (int i = 0; i < simulations.length; i++) {
                    try {
                        SimulationInfo simInfo = simulations[i].getSimulationInfo();
                        if (simInfo != null) {
                            // check for running once more... directly from job status
                            SimulationStatus serverSimulationStatus = getServerSimulationStatus(simInfo);
                            if (serverSimulationStatus != null && serverSimulationStatus.numberOfJobsDone() < simulations[i].getScanCount()) {
                                SimulationStatus simStatus = getClientServerManager().getJobManager().stopSimulation(simInfo.getAuthoritativeVCSimulationIdentifier());
                                // updateStatus
                                clientSimManager.updateStatusFromStopRequest(simulations[i], simStatus);
                            }
                        } else {
                            // this should really not happen...
                            throw new RuntimeException(">>>>>>>>>> trying to stop an unsaved simulation...");
                        }
                    } catch (Throwable exc) {
                        exc.printStackTrace(System.out);
                        failures.put(simulations[i], exc);
                    }
                }
                hashTable.put("failures", failures);
            }
        }
    };
    AsynchClientTask task2 = new AsynchClientTask("stopping simulations", AsynchClientTask.TASKTYPE_SWING_BLOCKING, false, false) {

        @Override
        public void run(Hashtable<String, Object> hashTable) throws Exception {
            @SuppressWarnings("unchecked") Hashtable<Simulation, Throwable> failures = (Hashtable<Simulation, Throwable>) hashTable.get("failures");
            if (failures != null && !failures.isEmpty()) {
                Enumeration<Simulation> en = failures.keys();
                while (en.hasMoreElements()) {
                    Simulation sim = (Simulation) en.nextElement();
                    Throwable exc = (Throwable) failures.get(sim);
                    // notify user
                    PopupGenerator.showErrorDialog(clientSimManager.getDocumentWindowManager(), "Failed to dispatch stop request for simulation'" + sim.getName() + "'\n" + exc.getMessage(), exc);
                }
            }
        }
    };
    ClientTaskDispatcher.dispatch(clientSimManager.getDocumentWindowManager().getComponent(), new Hashtable<String, Object>(), new AsynchClientTask[] { task1, task2 });
}

Example 2 with SimulationStatus

use of cbit.vcell.server.SimulationStatus in project vcell by virtualcell.

the class MathModelWindowManager method simStatusChanged.

/**
 * Insert the method's description here.
 * Creation date: (5/14/2004 11:08:35 AM)
 * @param newMathModel cbit.vcell.mathmodel.MathModel
 */
// private void setMathModel(MathModel newMathModel) {
// resetGeometryListeners((getMathModel() != null?(getMathModel().getMathDescription() != null?getMathModel().getMathDescription().getGeometry():null):null),
// (newMathModel != null?(newMathModel.getMathDescription() != null?newMathModel.getMathDescription().getGeometry():null):null));
// 
// resetMathDescriptionListeners(
// (getMathModel() != null?getMathModel().getMathDescription():null),
// (newMathModel != null?newMathModel.getMathDescription():null));
// if (getMathModel() != null) {
// getMathModel().removePropertyChangeListener(this);
// }
// mathModel = newMathModel;
// if (getMathModel() != null) {
// getMathModel().addPropertyChangeListener(this);
// }
// }
// private void resetMathDescriptionListeners(MathDescription oldMathDescription,MathDescription newMathDescription){
// if(oldMathDescription != null){
// oldMathDescription.removePropertyChangeListener(this);
// }
// if(newMathDescription != null){
// newMathDescription.addPropertyChangeListener(this);
// }
// }
// /**
// * Insert the method's description here.
// * Creation date: (6/14/2004 10:55:40 PM)
// * @param newDocument cbit.vcell.document.VCDocument
// */
// private void showDataViewerPlotsFrame(final javax.swing.JInternalFrame plotFrame) {
// dataViewerPlotsFramesVector.add(plotFrame);
// showFrame(plotFrame);
// plotFrame.addInternalFrameListener(new javax.swing.event.InternalFrameAdapter() {
// public void internalFrameClosing(javax.swing.event.InternalFrameEvent e) {
// dataViewerPlotsFramesVector.remove(plotFrame);
// }
// });
// }
// /**
// * Insert the method's description here.
// * Creation date: (6/14/2004 10:55:40 PM)
// * @param newDocument cbit.vcell.document.VCDocument
// */
// public void showDataViewerPlotsFrames(javax.swing.JInternalFrame[] plotFrames) {
// for (int i = 0; i < plotFrames.length; i++){
// showDataViewerPlotsFrame(plotFrames[i]);
// }
// }
/**
 * Insert the method's description here.
 * Creation date: (6/9/2004 3:58:21 PM)
 * @param newJobStatus cbit.vcell.messaging.db.SimulationJobStatus
 * @param progress java.lang.Double
 * @param timePoint java.lang.Double
 */
public void simStatusChanged(SimStatusEvent simStatusEvent) {
    // ** events are only generated from server side job statuses **
    KeyValue simKey = simStatusEvent.getVCSimulationIdentifier().getSimulationKey();
    // do we have the sim?
    Simulation[] sims = getMathModel().getSimulations();
    if (sims == null) {
        // we don't have it
        return;
    }
    Simulation simulation = null;
    for (int i = 0; i < sims.length; i++) {
        if (simKey.equals(sims[i].getKey()) || ((sims[i].getSimulationVersion() != null) && simKey.equals(sims[i].getSimulationVersion().getParentSimulationReference()))) {
            simulation = sims[i];
            break;
        }
    }
    if (simulation == null) {
        // we don't have it
        return;
    }
    // we have it; get current server side status
    SimulationStatus simStatus = getRequestManager().getServerSimulationStatus(simulation.getSimulationInfo());
    // if failed, notify
    if (simStatusEvent.isNewFailureEvent()) {
        String qualifier = "";
        if (simulation.getScanCount() > 1) {
            qualifier += "One job from ";
        }
        PopupGenerator.showErrorDialog(this, qualifier + "Simulation '" + simulation.getName() + "' failed\n" + simStatus.getDetails());
    }
    // update status display
    ClientSimManager simManager = simulationWorkspace.getClientSimManager();
    simManager.updateStatusFromServer(simulation);
    // is there new data?
    if (simStatusEvent.isNewDataEvent()) {
        fireNewData(new DataEvent(this, new VCSimulationDataIdentifier(simulation.getSimulationInfo().getAuthoritativeVCSimulationIdentifier(), simStatusEvent.getJobIndex())));
    }
}

Example 3 with SimulationStatus

use of cbit.vcell.server.SimulationStatus in project vcell by virtualcell.

the class ClientSimManager method updateStatusFromServer.

/**
 * Insert the method's description here.
 * Creation date: (6/9/2004 3:04:12 PM)
 */
void updateStatusFromServer(Simulation simulation) {
    // 
    // get cached status
    // 
    SimulationStatus oldStatus = getSimulationStatus(simulation);
    SimulationStatus serverStatus = getDocumentWindowManager().getRequestManager().getServerSimulationStatus(simulation.getSimulationInfo());
    SimulationStatus newStatus = null;
    if (oldStatus.isStopRequested() && serverStatus.numberOfJobsDone() < simulation.getScanCount()) {
        // if stop requested but still going, get updated server info but adjust status
        newStatus = SimulationStatus.newStopRequest(serverStatus);
    } else {
        // otherwise accept server information
        newStatus = serverStatus;
    }
    // update cache
    simHash.setSimulationStatus(simulation, newStatus);
    System.out.println("---ClientSimManager.updateStatusFromServer[newStatus=" + newStatus + "], simulation=" + simulation.toString());
    if (oldStatus != newStatus) {
        int simIndex = getSimWorkspace().getSimulationIndex(simulation);
        getSimWorkspace().firePropertyChange(SimulationWorkspace.PROPERTY_NAME_SIMULATION_STATUS, new Integer(-1), new Integer(simIndex));
    }
}

Example 4 with SimulationStatus

use of cbit.vcell.server.SimulationStatus in project vcell by virtualcell.

the class SimulationStatusHash method changeSimulationInstances.

/**
 * Insert the method's description here.
 * Creation date: (6/7/2004 12:55:18 PM)
 * @param simulations cbit.vcell.solver.Simulation[]
 */
public void changeSimulationInstances(Simulation[] newSimulations) {
    if (newSimulations == null) {
        hash.clear();
    } else {
        Hashtable<Simulation, SimulationStatus> newHash = new Hashtable<Simulation, SimulationStatus>();
        for (int i = 0; i < newSimulations.length; i++) {
            // 
            if (newSimulations[i].getKey() == null || newSimulations[i].getIsDirty()) {
                newHash.put(newSimulations[i], SimulationStatus.newNotSaved(newSimulations[i].getScanCount()));
            // 
            // try to find status for previous instance of this simulation
            // 
            } else {
                SimulationStatus newSimStatus = null;
                Enumeration<Simulation> en = this.hash.keys();
                while (en.hasMoreElements()) {
                    Simulation sim = en.nextElement();
                    // 
                    // if simulations have the same "authoritative simulation identifier" then use this status
                    // 
                    cbit.vcell.solver.SimulationInfo oldSimInfo = sim.getSimulationInfo();
                    cbit.vcell.solver.SimulationInfo newSimInfo = newSimulations[i].getSimulationInfo();
                    if (oldSimInfo != null && newSimInfo != null && oldSimInfo.getAuthoritativeVCSimulationIdentifier().equals(newSimInfo.getAuthoritativeVCSimulationIdentifier())) {
                        // 
                        if (newSimStatus != null) {
                            System.out.println("warning: more than one match for simulation status");
                        }
                        newSimStatus = hash.get(sim);
                    }
                }
                if (newSimStatus != null) {
                    newHash.put(newSimulations[i], newSimStatus);
                } else {
                    // unknown status
                    newHash.put(newSimulations[i], SimulationStatus.newUnknown(newSimulations[i].getScanCount()));
                }
            }
        }
        hash = newHash;
    }
}

Example 5 with SimulationStatus

use of cbit.vcell.server.SimulationStatus in project vcell by virtualcell.

the class SimulationListPanel method editSimulation.

/**
 * Comment
 */
private void editSimulation() {
    // this should not be possible to call unless exactly one row is selected, but check anyway
    int[] selectedRows = getScrollPaneTable().getSelectedRows();
    if (selectedRows.length > 0) {
        // make sure something is selected...
        Simulation sim = (Simulation) (ivjSimulationListTableModel1.getValueAt(selectedRows[0]));
        SimulationStatus simStatus = getSimulationWorkspace().getSimulationStatus(sim);
        if (!simStatus.isRunning()) {
            // just the first one if more than one selected...
            SimulationWorkspace.editSimulation(this, getSimulationWorkspace().getSimulationOwner(), sim);
            // need to check if parallel option changed
            refreshButtonsLax();
        }
    }
}