Examples with SnomedDescriptionIndexEntry com.b2international.snowowl.snomed.datastore.index.entry.SnomedDescriptionIndexEntry used on opensource projects

Example 31 with SnomedDescriptionIndexEntry

use of com.b2international.snowowl.snomed.datastore.index.entry.SnomedDescriptionIndexEntry in project snow-owl by b2ihealthcare.

the class SnomedDescriptionCreateRequest method execute.

@Override
public String execute(TransactionContext context) {
    try {
        final String descriptionId = ((ConstantIdStrategy) getIdGenerationStrategy()).getId();
        final SnomedDescriptionIndexEntry description = SnomedComponents.newDescription().withId(descriptionId).withActive(isActive()).withModuleId(getModuleId()).withCaseSignificanceId(caseSignificanceId).withTerm(term).withType(typeId).withLanguageCode(languageCode).withConcept(conceptId).build(context);
        new SnomedDescriptionAcceptabilityUpdateRequest(description, acceptability, true).execute(context);
        // FIXME: Acceptability updates and member create requests can overlap
        convertMembers(context, descriptionId);
        context.add(description);
        // update inactivation reason members if the new description was immediately set to have an inactivation member
        if (inactivationIndicatorId != null) {
            final SnomedInactivationReasonUpdateRequest inactivationUpdate = new SnomedInactivationReasonUpdateRequest(description, Concepts.REFSET_DESCRIPTION_INACTIVITY_INDICATOR, true);
            inactivationUpdate.setInactivationValueId(inactivationIndicatorId);
            inactivationUpdate.execute(context);
        }
        return description.getId();
    } catch (ComponentNotFoundException e) {
        throw e.toBadRequestException();
    }
}

Example 32 with SnomedDescriptionIndexEntry

use of com.b2international.snowowl.snomed.datastore.index.entry.SnomedDescriptionIndexEntry in project snow-owl by b2ihealthcare.

the class PreferredDescriptionPreCommitHookTest method updateTermOfConceptFsn.

@Test
public void updateTermOfConceptFsn() throws Exception {
    final SnomedConceptDocument concept = concept().build();
    final SnomedDescriptionIndexEntry fsn = fsn(concept.getId(), Collections.singletonMap(Concepts.REFSET_LANGUAGE_TYPE_UK, Acceptability.PREFERRED));
    initRevisions(docWithDefaults(concept).preferredDescriptions(ImmutableList.of(new SnomedDescriptionFragment(fsn.getId(), fsn.getTypeId(), fsn.getTerm(), Concepts.REFSET_LANGUAGE_TYPE_UK))).build(), fsn);
    stageChange(fsn, SnomedDescriptionIndexEntry.builder(fsn).term("Term (changed)").build());
    final ConceptChangeProcessor processor = process();
    final SnomedConceptDocument expected = docWithDefaults(concept).semanticTags(ImmutableSortedSet.of("changed")).preferredDescriptions(ImmutableList.of(new SnomedDescriptionFragment(fsn.getId(), fsn.getTypeId(), "Term (changed)", Concepts.REFSET_LANGUAGE_TYPE_UK))).build();
    final Revision actual = Iterables.getOnlyElement(processor.getChangedMappings().values()).getNewRevision();
    assertDocEquals(expected, actual);
    assertEquals(0, processor.getNewMappings().size());
    assertEquals(0, processor.getDeletions().size());
}

Example 33 with SnomedDescriptionIndexEntry

use of com.b2international.snowowl.snomed.datastore.index.entry.SnomedDescriptionIndexEntry in project snow-owl by b2ihealthcare.

the class PreferredDescriptionPreCommitHookTest method inactivateFsnOfConcept.

@Test
public void inactivateFsnOfConcept() throws Exception {
    final SnomedConceptDocument concept = concept().build();
    final SnomedDescriptionIndexEntry fsn = fsn(concept.getId(), Collections.singletonMap(Concepts.REFSET_LANGUAGE_TYPE_UK, Acceptability.PREFERRED));
    initRevisions(docWithDefaults(concept).preferredDescriptions(ImmutableList.of(new SnomedDescriptionFragment(fsn.getId(), fsn.getTypeId(), fsn.getTerm(), Concepts.REFSET_LANGUAGE_TYPE_UK))).build(), fsn);
    stageChange(fsn, SnomedDescriptionIndexEntry.builder(fsn).active(false).build());
    final ConceptChangeProcessor processor = process();
    final SnomedConceptDocument expected = docWithDefaults(concept).build();
    final Revision actual = Iterables.getOnlyElement(processor.getChangedMappings().values()).getNewRevision();
    assertDocEquals(expected, actual);
    assertEquals(0, processor.getNewMappings().size());
    assertEquals(0, processor.getDeletions().size());
}

Example 34 with SnomedDescriptionIndexEntry

use of com.b2international.snowowl.snomed.datastore.index.entry.SnomedDescriptionIndexEntry in project snow-owl by b2ihealthcare.

the class PreferredDescriptionPreCommitHookTest method indexNewFsnForExistingConcept.

@Test
public void indexNewFsnForExistingConcept() throws Exception {
    final SnomedConceptDocument concept = concept().build();
    initRevisions(docWithDefaults(concept).build());
    final SnomedDescriptionIndexEntry fsn = fsn(concept.getId(), Collections.singletonMap(Concepts.REFSET_LANGUAGE_TYPE_UK, Acceptability.PREFERRED));
    stageNew(fsn);
    final ConceptChangeProcessor processor = process();
    final SnomedConceptDocument expected = docWithDefaults(concept).semanticTags(ImmutableSortedSet.of("semantic tag")).preferredDescriptions(ImmutableList.of(new SnomedDescriptionFragment(fsn.getId(), fsn.getTypeId(), fsn.getTerm(), Concepts.REFSET_LANGUAGE_TYPE_UK))).build();
    assertEquals(1, processor.getChangedMappings().size());
    final Revision actual = Iterables.getOnlyElement(processor.getChangedMappings().values()).getNewRevision();
    assertDocEquals(expected, actual);
    assertEquals(0, processor.getNewMappings().size());
    assertEquals(0, processor.getDeletions().size());
}

Example 35 with SnomedDescriptionIndexEntry

use of com.b2international.snowowl.snomed.datastore.index.entry.SnomedDescriptionIndexEntry in project snow-owl by b2ihealthcare.

the class PreferredDescriptionPreCommitHookTest method removeFsnFromExistingConcept.

@Test
public void removeFsnFromExistingConcept() throws Exception {
    final SnomedConceptDocument concept = concept().build();
    final SnomedDescriptionIndexEntry fsn = fsn(concept.getId(), Collections.singletonMap(Concepts.REFSET_LANGUAGE_TYPE_UK, Acceptability.PREFERRED));
    initRevisions(docWithDefaults(concept).preferredDescriptions(ImmutableList.of(new SnomedDescriptionFragment(fsn.getId(), fsn.getTypeId(), fsn.getTerm(), Concepts.REFSET_LANGUAGE_TYPE_UK))).build(), fsn);
    stageRemove(fsn);
    final ConceptChangeProcessor processor = process();
    final SnomedConceptDocument expected = docWithDefaults(concept).build();
    final Revision actual = Iterables.getOnlyElement(processor.getChangedMappings().values()).getNewRevision();
    assertDocEquals(expected, actual);
    assertEquals(0, processor.getNewMappings().size());
    assertEquals(0, processor.getDeletions().size());
}