Examples with BoolParameter com.genericworkflownodes.knime.parameter.BoolParameter used on opensource projects

Example 1 with BoolParameter

use of com.genericworkflownodes.knime.parameter.BoolParameter in project GenericKnimeNodes by genericworkflownodes.

the class CTDHandlerTest method testParamHandler.

@Test
public void testParamHandler() throws ParserConfigurationException, SAXException, IOException {
    SchemaFactory schemaFactory = SchemaFactory.newInstance(XMLConstants.W3C_XML_SCHEMA_NS_URI);
    Schema ctdSchema = schemaFactory.newSchema(SchemaProvider.class.getResource("CTD.xsd"));
    SAXParserFactory spfac = SAXParserFactory.newInstance();
    spfac.setValidating(false);
    spfac.setSchema(ctdSchema);
    // Now use the parser factory to create a SAXParser object
    SAXParser sp = spfac.newSAXParser();
    CTDHandler handler = new CTDHandler(sp.getXMLReader());
    sp.parse(TestDataSource.class.getResourceAsStream("FileFilter.ctd"), handler);
    INodeConfiguration config = handler.getNodeConfiguration();
    StringParameter mz = (StringParameter) config.getParameter("FileFilter.1.mz");
    assertEquals("m/z range to extract (applies to ALL ms levels!)", mz.getDescription());
    assertEquals(":", mz.getValue());
    assertEquals("mz", mz.getKey());
    IntegerListParameter levels = (IntegerListParameter) config.getParameter("FileFilter.1.peak_options.level");
    assertEquals("MS levels to extract", levels.getDescription());
    assertEquals(3, levels.getValue().size());
    assertEquals(1, levels.getValue().get(0).intValue());
    assertEquals(2, levels.getValue().get(1).intValue());
    assertEquals(3, levels.getValue().get(2).intValue());
    assertEquals(false, levels.isAdvanced());
    StringChoiceParameter int_precision = (StringChoiceParameter) config.getParameter("FileFilter.1.peak_options.int_precision");
    assertEquals("32", int_precision.getValue());
    assertEquals(3, int_precision.getAllowedValues().size());
    BoolParameter no_progress = (BoolParameter) config.getParameter("FileFilter.1.no_progress");
    assertEquals(false, no_progress.getValue());
    assertEquals(true, no_progress.isAdvanced());
    assertEquals(3, config.getInputPorts().size());
    assertEquals("FileFilter.1.in", config.getInputPorts().get(0).getName());
}

Example 2 with BoolParameter

use of com.genericworkflownodes.knime.parameter.BoolParameter in project GenericKnimeNodes by genericworkflownodes.

the class CTDConfigurationWriterTest method testWrite.

@Test
public void testWrite() throws Exception {
    CTDConfigurationReader reader = new CTDConfigurationReader();
    INodeConfiguration config = reader.read(TestDataSource.class.getResourceAsStream("FileFilter.ctd"));
    // write to test file
    File tmp = File.createTempFile("testing_", ".ini");
    tmp.deleteOnExit();
    BufferedWriter buffered_file_writer = new BufferedWriter(new FileWriter(tmp));
    CTDConfigurationWriter file_writer = new CTDConfigurationWriter(buffered_file_writer);
    file_writer.write(config);
    config = reader.read(new FileInputStream(tmp));
    StringParameter mz = (StringParameter) config.getParameter("FileFilter.1.mz");
    assertEquals("m/z range to extract (applies to ALL ms levels!)", mz.getDescription());
    assertEquals(":", mz.getValue());
    assertEquals("mz", mz.getKey());
    IntegerListParameter levels = (IntegerListParameter) config.getParameter("FileFilter.1.peak_options.level");
    assertNotNull(levels);
    assertEquals("MS levels to extract", levels.getDescription());
    assertEquals(3, levels.getValue().size());
    assertEquals(1, levels.getValue().get(0).intValue());
    assertEquals(2, levels.getValue().get(1).intValue());
    assertEquals(3, levels.getValue().get(2).intValue());
    assertEquals(false, levels.isAdvanced());
    assertEquals(Integer.valueOf(1), levels.getLowerBound());
    StringChoiceParameter int_precision = (StringChoiceParameter) config.getParameter("FileFilter.1.peak_options.int_precision");
    assertEquals("32", int_precision.getValue());
    assertEquals(3, int_precision.getAllowedValues().size());
    BoolParameter no_progress = (BoolParameter) config.getParameter("FileFilter.1.no_progress");
    assertEquals(false, no_progress.getValue());
    assertEquals(true, no_progress.isAdvanced());
    // Three inputs, one required, one optional with default, one optional without default
    assertEquals(2, config.getInputPorts().size());
    assertEquals("FileFilter.1.in", config.getInputPorts().get(0).getName());
}

Example 3 with BoolParameter

use of com.genericworkflownodes.knime.parameter.BoolParameter in project GenericKnimeNodes by genericworkflownodes.

the class ParamHandler method handleStringType.

/**
 * Convert the current element into a StringParameter.
 *
 * @param paramName
 *            The name of the Parameter
 * @param paramValue
 *            The value of the Parameter as given in the param file.
 * @param attributes
 *            Attributes of the Parameter.
 */
private void handleStringType(String paramName, String paramValue, Attributes attributes) {
    if (isPort(attributes)) {
        createPort(paramName, attributes, false);
    } else {
        // check if we have a boolean
        String restrictions = attributes.getValue(ATTR_RESTRICTIONS);
        if (isBooleanParameter(restrictions)) {
            m_currentParameter = new BoolParameter(paramName, paramValue);
        } else {
            if (restrictions != null && restrictions.length() > 0) {
                m_currentParameter = new StringChoiceParameter(paramName, restrictions.split(","));
                ((StringChoiceParameter) m_currentParameter).setValue(paramValue);
            } else {
                m_currentParameter = new StringParameter(paramName, paramValue);
            }
        }
    }
}

Example 4 with BoolParameter

use of com.genericworkflownodes.knime.parameter.BoolParameter in project GenericKnimeNodes by genericworkflownodes.

the class ParamCellEditor method getCellEditorValue.

@Override
public Object getCellEditorValue() {
    if (param instanceof StringParameter || param instanceof DoubleParameter || param instanceof IntegerParameter) {
        try {
            if ((new ParameterVerifier(param)).verify(field)) {
                param.fillFromString(field.getText());
            } else {
                JOptionPane.showMessageDialog(null, String.format("Invalid parameter value. Please provide a valid value for: %s", param.getMnemonic()));
            }
        } catch (InvalidParameterValueException e) {
            LOGGER.error(e.getMessage(), e);
        }
    }
    if (param instanceof StringChoiceParameter) {
        StringChoiceParameter scp = (StringChoiceParameter) param;
        String selectedValue = (String) choiceComboBox.getSelectedItem();
        scp.setValue(selectedValue);
    }
    if (param instanceof BoolParameter) {
        try {
            param.fillFromString(choiceComboBox.getSelectedItem().toString());
        } catch (InvalidParameterValueException e) {
            LOGGER.error(e.getMessage(), e);
        }
    }
    if (param instanceof ListParameter) {
        String workaround = listEditorComponent.getParameterValue();
        try {
            param.fillFromString(workaround);
        } catch (InvalidParameterValueException e) {
            LOGGER.error(e.getMessage(), e);
        }
    }
    return param;
}

Example 5 with BoolParameter

use of com.genericworkflownodes.knime.parameter.BoolParameter in project GenericKnimeNodes by genericworkflownodes.

the class ParamCellEditor method getTableCellEditorComponent.

@Override
public Component getTableCellEditorComponent(JTable table, Object value, boolean isSelected, int row, int column) {
    param = (Parameter<?>) value;
    if (value instanceof StringChoiceParameter) {
        StringChoiceParameter scp = (StringChoiceParameter) value;
        String[] values = new String[scp.getLabels().size()];
        int i = 0;
        for (String s : scp.getLabels()) {
            values[i++] = s;
        }
        choiceComboBox = new JComboBox(values);
        // we need to make sure that we catch all edit operations.
        choiceComboBox.addItemListener(new ChoiceParamItemListener<StringChoiceParameter>(scp));
        choiceComboBox.setSelectedItem(scp.getValue());
        return choiceComboBox;
    }
    if (value instanceof StringParameter || value instanceof DoubleParameter || value instanceof IntegerParameter) {
        field = new JTextField(value.toString());
        field.setInputVerifier(new ParameterVerifier(param));
        return field;
    }
    if (value instanceof BoolParameter) {
        String[] values = new String[] { "true", "false" };
        choiceComboBox = new JComboBox(values);
        choiceComboBox.addItemListener(new ChoiceParamItemListener<BoolParameter>((BoolParameter) param));
        // Make sure that the old value is selected in the beginning.
        choiceComboBox.setSelectedIndex(((BoolParameter) value).getValue() ? 0 : 1);
        return choiceComboBox;
    }
    if (value instanceof ListParameter) {
        listEditorComponent = new ListEditorComponent((ListParameter) param, this);
        return listEditorComponent;
    }
    return null;
}