Examples with VcfBurdenRscriptV com.github.lindenb.jvarkit.tools.burden.VcfBurdenRscriptV used on opensource projects

Example 1 with VcfBurdenRscriptV

use of com.github.lindenb.jvarkit.tools.burden.VcfBurdenRscriptV in project jvarkit by lindenb.

the class TestNg01 method testVcfBurdenRscriptV.

@Test(groups = { "burden" }, dependsOnMethods = { "testVcfMultiToOneAllele" })
public void testVcfBurdenRscriptV() throws IOException {
    final File input = new File(TEST_RESULTS_DIR, "tmp.multi2oneallele.vcf");
    final File output = new File(TEST_RESULTS_DIR, "tmp.R");
    Assert.assertEquals(0, new VcfBurdenRscriptV().instanceMain(new String[] { "-o", output.getPath(), input.getPath() }));
    Assert.assertTrue(output.exists());
}