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Example 1 with BamTile

use of com.github.lindenb.jvarkit.tools.misc.BamTile in project jvarkit by lindenb.

the class TestNg01 method testBamTile.

@Test
public void testBamTile() throws IOException {
    final File output = new File(TEST_RESULTS_DIR, "jeter.bam");
    Assert.assertEquals(0, new BamTile().instanceMain(new String[] { "-o", output.getPath(), TOY_BAM }));
    Assert.assertTrue(output.delete());
}
Also used : BamTile(com.github.lindenb.jvarkit.tools.misc.BamTile) File(java.io.File) Test(org.testng.annotations.Test)

Aggregations

BamTile (com.github.lindenb.jvarkit.tools.misc.BamTile)1 File (java.io.File)1 Test (org.testng.annotations.Test)1