Examples with ConcatSam com.github.lindenb.jvarkit.tools.misc.ConcatSam used on opensource projects

Example 1 with ConcatSam

use of com.github.lindenb.jvarkit.tools.misc.ConcatSam in project jvarkit by lindenb.

the class TestNg01 method testConcatSam.

@Test
public void testConcatSam() throws IOException {
    File output = new File(TEST_RESULTS_DIR, "jeter.sam");
    Assert.assertEquals(0, new ConcatSam().instanceMain(new String[] { "-o", output.getPath(), TOY_BAM }));
    Assert.assertTrue(output.exists());
}