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Example 1 with PadEmptyFastq

use of com.github.lindenb.jvarkit.tools.misc.PadEmptyFastq in project jvarkit by lindenb.

the class TestNg01 method testPad.

@Test
public void testPad() throws IOException {
    final File output = new File(TEST_RESULTS_DIR, "jeter.fq.gz");
    Assert.assertEquals(0, new PadEmptyFastq().instanceMain(new String[] { "-o", output.getPath(), "./src/test/resources/SAMPLE1_GATGAATC_L002_R1_001.fastq.gz" }));
    Assert.assertTrue(output.delete());
}
Also used : PadEmptyFastq(com.github.lindenb.jvarkit.tools.misc.PadEmptyFastq) File(java.io.File) Test(org.testng.annotations.Test)

Aggregations

PadEmptyFastq (com.github.lindenb.jvarkit.tools.misc.PadEmptyFastq)1 File (java.io.File)1 Test (org.testng.annotations.Test)1