Examples with VcfToSql com.github.lindenb.jvarkit.tools.vcf2sql.VcfToSql used on opensource projects

Example 1 with VcfToSql

use of com.github.lindenb.jvarkit.tools.vcf2sql.VcfToSql in project jvarkit by lindenb.

the class TestNg01 method testVcfToSql.

@Test(dataProvider = "all_vcfs")
public void testVcfToSql(final String path) throws IOException {
    final File outvcf = new File(TEST_RESULTS_DIR, "jeter.vcf");
    Assert.assertEquals(0, new VcfToSql().instanceMain(new String[] { "-o", outvcf.getPath(), path }));
    Assert.assertTrue(outvcf.delete());
}