Examples with VCFFamilies com.github.lindenb.jvarkit.tools.vcftrios.VCFFamilies used on opensource projects

Example 1 with VCFFamilies

use of com.github.lindenb.jvarkit.tools.vcftrios.VCFFamilies in project jvarkit by lindenb.

the class TestNg01 method testVcfFamilies.

@Test(dependsOnMethods = { "testVcfInjectPed" })
public void testVcfFamilies() throws IOException {
    final File input = new File(TEST_RESULTS_DIR, "tmp.ped.vcf");
    Assert.assertEquals(0, new VCFFamilies().instanceMain(new String[] { "-o", JETER_VCF.getPath(), input.getPath() }));
    assertIsVcf(JETER_VCF);
    Assert.assertTrue(JETER_VCF.exists());
}