Examples with IgvSocket com.github.lindenb.jvarkit.util.igv.IgvSocket used on opensource projects

Example 1 with IgvSocket

use of com.github.lindenb.jvarkit.util.igv.IgvSocket in project jvarkit by lindenb.

the class NgsStage method openInIgv.

/**
 * send those command to IGV
 */
protected void openInIgv(final List<String> commands) {
    if (commands == null || commands.isEmpty())
        return;
    @SuppressWarnings("resource") final IgvSocket socket = new IgvSocket();
    final Runnable r = socket.buildRunnable(commands);
    new Thread(r).start();
}