Examples with Datasets com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets used on opensource projects

Example 1 with Datasets

use of com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets in project beam by apache.

the class HttpHealthcareApiClient method importFhirResource.

@Override
public Operation importFhirResource(String fhirStore, String gcsSourcePath, @Nullable String contentStructure) throws IOException {
    GoogleCloudHealthcareV1FhirGcsSource gcsSrc = new GoogleCloudHealthcareV1FhirGcsSource();
    gcsSrc.setUri(gcsSourcePath);
    ImportResourcesRequest importRequest = new ImportResourcesRequest();
    importRequest.setGcsSource(gcsSrc).setContentStructure(contentStructure);
    return client.projects().locations().datasets().fhirStores().healthcareImport(fhirStore, importRequest).execute();
}

Example 2 with Datasets

use of com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets in project beam by apache.

the class HttpHealthcareApiClient method searchFhirResource.

@Override
public HttpBody searchFhirResource(String fhirStore, String resourceType, @Nullable Map<String, Object> parameters, String pageToken) throws IOException {
    SearchResourcesRequest request = new SearchResourcesRequest().setResourceType(resourceType);
    Search search = client.projects().locations().datasets().fhirStores().fhir().search(fhirStore, request);
    if (parameters != null && !parameters.isEmpty()) {
        parameters.forEach(search::set);
    }
    if (pageToken != null && !pageToken.isEmpty()) {
        search.set("_page_token", URLDecoder.decode(pageToken, "UTF-8"));
    }
    return search.execute();
}

Example 3 with Datasets

use of com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets in project beam by apache.

the class HttpHealthcareApiClient method deidentifyFhirStore.

@Override
public Operation deidentifyFhirStore(String sourcefhirStore, String destinationFhirStore, DeidentifyConfig deidConfig) throws IOException {
    DeidentifyFhirStoreRequest deidRequest = new DeidentifyFhirStoreRequest();
    deidRequest.setDestinationStore(destinationFhirStore);
    deidRequest.setConfig(deidConfig);
    return client.projects().locations().datasets().fhirStores().deidentify(sourcefhirStore, deidRequest).execute();
}

Example 4 with Datasets

use of com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets in project java-docs-samples by GoogleCloudPlatform.

the class HL7v2MessageIngest method hl7v2MessageIngest.

public static void hl7v2MessageIngest(String hl7v2StoreName, String filePath) throws IOException {
    // String hl7v2StoreName =
    // String.format(
    // HL7v2_NAME, "your-project-id", "your-region-id", "your-dataset-id", "your-hl7v2-id");
    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    // Load the data from file and format it into an ingest request.
    List<String> lines = Files.readAllLines(Paths.get(filePath), Charset.defaultCharset());
    String data = String.join("\n", lines);
    Message message = new Message().setData(data);
    IngestMessageRequest ingestRequest = new IngestMessageRequest().setMessage(message);
    // Create request and configure any parameters.
    Messages.Ingest request = client.projects().locations().datasets().hl7V2Stores().messages().ingest(hl7v2StoreName, ingestRequest);
    // Execute the request and process the results.
    IngestMessageResponse response = request.execute();
    System.out.println("HL7v2 message ingested: " + response.toPrettyString());
}

Example 5 with Datasets

use of com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets in project java-docs-samples by GoogleCloudPlatform.

the class HL7v2MessagePatch method hl7v2MessagePatch.

public static void hl7v2MessagePatch(String hl7v2MessageName) throws IOException {
    // String hl7v2MessageName =
    // String.format(
    // MESSAGE_NAME, "project-id", "region-id", "dataset-id", "hl7v2-id", "message-id");
    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    // Fetch the initial state of the message.
    Messages.Get getRequest = client.projects().locations().datasets().hl7V2Stores().messages().get(hl7v2MessageName);
    Message message = getRequest.execute();
    // Update the Message fields as needed as needed. For a full list of Message fields, see:
    // https://cloud.google.com/healthcare/docs/reference/rest/v1/projects.locations.datasets.hl7V2Stores.messages
    Map<String, String> labels = new HashMap<>();
    labels.put("key1", "value1");
    labels.put("key2", "value2");
    message.setLabels(labels);
    // Create request and configure any parameters.
    Messages.Patch request = client.projects().locations().datasets().hl7V2Stores().messages().patch(hl7v2MessageName, message).setUpdateMask("labels");
    // Execute the request and process the results.
    message = request.execute();
    System.out.println("HL7v2 message patched: \n" + message.toPrettyString());
}