Examples with Dataset com.google.api.services.healthcare.v1.model.Dataset used on opensource projects

Example 16 with Dataset

use of com.google.api.services.healthcare.v1.model.Dataset in project java-docs-samples by GoogleCloudPlatform.

the class FhirResourceGet method fhirResourceGet.

public static void fhirResourceGet(String resourceName) throws IOException, URISyntaxException {
    // String resourceName =
    // String.format(
    // FHIR_NAME, "project-id", "region-id", "dataset-id", "store-id", "resource-type",
    // "resource-id");
    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    HttpClient httpClient = HttpClients.createDefault();
    String uri = String.format("%sv1/%s", client.getRootUrl(), resourceName);
    URIBuilder uriBuilder = new URIBuilder(uri).setParameter("access_token", getAccessToken());
    HttpUriRequest request = RequestBuilder.get().setUri(uriBuilder.build()).build();
    // Execute the request and process the results.
    HttpResponse response = httpClient.execute(request);
    HttpEntity responseEntity = response.getEntity();
    if (response.getStatusLine().getStatusCode() != HttpStatus.SC_OK) {
        String errorMessage = String.format("Exception retrieving FHIR resource: %s\n", response.getStatusLine().toString());
        System.err.print(errorMessage);
        responseEntity.writeTo(System.err);
        throw new RuntimeException(errorMessage);
    }
    System.out.println("FHIR resource retrieved: ");
    responseEntity.writeTo(System.out);
}

Example 17 with Dataset

use of com.google.api.services.healthcare.v1.model.Dataset in project java-docs-samples by GoogleCloudPlatform.

the class DicomWebSearchStudies method dicomWebSearchStudies.

public static void dicomWebSearchStudies(String dicomStoreName) throws IOException {
    // String dicomStoreName =
    // String.format(
    // DICOM_NAME, "your-project-id", "your-region-id", "your-dataset-id", "your-dicom-id");
    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    DicomStores.SearchForStudies request = client.projects().locations().datasets().dicomStores().searchForStudies(dicomStoreName, "studies").set("PatientName", "Sally Zhang");
    // Execute the request and process the results.
    HttpResponse response = request.executeUnparsed();
    System.out.println("Studies found: \n" + response.toString());
}

Example 18 with Dataset

use of com.google.api.services.healthcare.v1.model.Dataset in project java-docs-samples by GoogleCloudPlatform.

the class FhirStoreCreate method fhirStoreCreate.

public static void fhirStoreCreate(String datasetName, String fhirStoreId) throws IOException {
    // String datasetName =
    // String.format(DATASET_NAME, "your-project-id", "your-region-id", "your-dataset-id");
    // String fhirStoreId = "your-fhir-id"
    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    // Configure the FhirStore to be created.
    Map<String, String> labels = new HashMap<String, String>();
    labels.put("key1", "value1");
    labels.put("key2", "value2");
    String version = "STU3";
    FhirStore content = new FhirStore().setLabels(labels).setVersion(version);
    // Create request and configure any parameters.
    FhirStores.Create request = client.projects().locations().datasets().fhirStores().create(datasetName, content).setFhirStoreId(fhirStoreId);
    // Execute the request and process the results.
    FhirStore response = request.execute();
    System.out.println("FHIR store created: " + response.toPrettyString());
}

Example 19 with Dataset

use of com.google.api.services.healthcare.v1.model.Dataset in project java-docs-samples by GoogleCloudPlatform.

the class FhirStoreExecuteBundle method fhirStoreExecuteBundle.

public static void fhirStoreExecuteBundle(String fhirStoreName, String data) throws IOException, URISyntaxException {
    // String fhirStoreName =
    // String.format(
    // FHIR_NAME, "your-project-id", "your-region-id", "your-dataset-id", "your-fhir-id");
    // String data = "{\"resourceType\": \"Bundle\",\"type\": \"batch\",\"entry\": []}"
    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    HttpClient httpClient = HttpClients.createDefault();
    String baseUri = String.format("%sv1/%s/fhir", client.getRootUrl(), fhirStoreName);
    URIBuilder uriBuilder = new URIBuilder(baseUri).setParameter("access_token", getAccessToken());
    StringEntity requestEntity = new StringEntity(data);
    HttpUriRequest request = RequestBuilder.post().setUri(uriBuilder.build()).setEntity(requestEntity).addHeader("Content-Type", "application/fhir+json").addHeader("Accept-Charset", "utf-8").addHeader("Accept", "application/fhir+json; charset=utf-8").build();
    // Execute the request and process the results.
    HttpResponse response = httpClient.execute(request);
    HttpEntity responseEntity = response.getEntity();
    if (response.getStatusLine().getStatusCode() != HttpStatus.SC_OK) {
        System.err.print(String.format("Exception executing FHIR bundle: %s\n", response.getStatusLine().toString()));
        responseEntity.writeTo(System.err);
        throw new RuntimeException();
    }
    System.out.print("FHIR bundle executed: ");
    responseEntity.writeTo(System.out);
}

Example 20 with Dataset

use of com.google.api.services.healthcare.v1.model.Dataset in project java-docs-samples by GoogleCloudPlatform.

the class FhirStoreExport method fhirStoreExport.

public static void fhirStoreExport(String fhirStoreName, String gcsUri) throws IOException {
    // String fhirStoreName =
    // String.format(
    // FHIR_NAME, "your-project-id", "your-region-id", "your-dataset-id", "your-fhir-id");
    // String gcsUri = "gs://your-bucket-id/path/to/destination/dir"
    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    // Configure where the store will be exported too.
    GoogleCloudHealthcareV1FhirGcsDestination gcsDestination = new GoogleCloudHealthcareV1FhirGcsDestination().setUriPrefix(gcsUri);
    ExportResourcesRequest exportRequest = new ExportResourcesRequest().setGcsDestination(gcsDestination);
    // Create request and configure any parameters.
    FhirStores.Export request = client.projects().locations().datasets().fhirStores().export(fhirStoreName, exportRequest);
    // Execute the request, wait for the operation to complete, and process the results.
    try {
        Operation operation = request.execute();
        while (operation.getDone() == null || !operation.getDone()) {
            // Update the status of the operation with another request.
            // Pause for 500ms between requests.
            Thread.sleep(500);
            operation = client.projects().locations().datasets().operations().get(operation.getName()).execute();
        }
        System.out.println("Fhir store export complete." + operation.getResponse());
    } catch (Exception ex) {
        System.out.printf("Error during request execution: %s", ex.toString());
        ex.printStackTrace(System.out);
    }
}