use of com.google.api.services.serviceusage.v1beta1.model.Operation in project java-docs-samples by GoogleCloudPlatform.
the class FhirStoreImport method fhirStoreImport.
public static void fhirStoreImport(String fhirStoreName, String gcsUri) throws IOException {
// String fhirStoreName =
// String.format(
// FHIR_NAME, "your-project-id", "your-region-id", "your-dataset-id", "your-fhir-id");
// String gcsUri = "gs://your-bucket-id/path/to/destination/dir"
// Initialize the client, which will be used to interact with the service.
CloudHealthcare client = createClient();
// Configure where the store should be imported from.
GoogleCloudHealthcareV1FhirGcsSource gcsSource = new GoogleCloudHealthcareV1FhirGcsSource().setUri(gcsUri);
ImportResourcesRequest importRequest = new ImportResourcesRequest().setGcsSource(gcsSource);
// Create request and configure any parameters.
FhirStores.CloudHealthcareImport request = client.projects().locations().datasets().fhirStores().healthcareImport(fhirStoreName, importRequest);
// Execute the request, wait for the operation to complete, and process the results.
try {
Operation operation = request.execute();
while (operation.getDone() == null || !operation.getDone()) {
// Update the status of the operation with another request.
// Pause for 500ms between requests.
Thread.sleep(500);
operation = client.projects().locations().datasets().operations().get(operation.getName()).execute();
}
System.out.println("FHIR store import complete: " + operation.getResponse());
} catch (Exception ex) {
System.out.printf("Error during request execution: %s", ex.toString());
ex.printStackTrace(System.out);
}
}
use of com.google.api.services.serviceusage.v1beta1.model.Operation in project java-docs-samples by GoogleCloudPlatform.
the class DatasetDeIdentify method datasetDeIdentify.
public static void datasetDeIdentify(String srcDatasetName, String destDatasetName) throws IOException {
// String srcDatasetName =
// String.format(DATASET_NAME, "your-project-id", "your-region-id", "your-src-dataset-id");
// String destDatasetName =
// String.format(DATASET_NAME, "your-project-id", "your-region-id", "your-dest-dataset-id");
// Initialize the client, which will be used to interact with the service.
CloudHealthcare client = createClient();
// Configure what information needs to be De-Identified.
// For more information on de-identifying using tags, please see the following:
// https://cloud.google.com/healthcare/docs/how-tos/dicom-deidentify#de-identification_using_tags
TagFilterList tags = new TagFilterList().setTags(Arrays.asList("PatientID"));
DicomConfig dicomConfig = new DicomConfig().setKeepList(tags);
DeidentifyConfig config = new DeidentifyConfig().setDicom(dicomConfig);
// Create the de-identify request and configure any parameters.
DeidentifyDatasetRequest deidentifyRequest = new DeidentifyDatasetRequest().setDestinationDataset(destDatasetName).setConfig(config);
Datasets.Deidentify request = client.projects().locations().datasets().deidentify(srcDatasetName, deidentifyRequest);
// Execute the request, wait for the operation to complete, and process the results.
try {
Operation operation = request.execute();
while (operation.getDone() == null || !operation.getDone()) {
// Update the status of the operation with another request.
// Pause for 500ms between requests.
Thread.sleep(500);
operation = client.projects().locations().datasets().operations().get(operation.getName()).execute();
}
System.out.println("De-identified Dataset created. Response content: " + operation.getResponse());
} catch (Exception ex) {
System.out.printf("Error during request execution: %s", ex.toString());
ex.printStackTrace(System.out);
}
}
use of com.google.api.services.serviceusage.v1beta1.model.Operation in project terra-cli by DataBiosphere.
the class GoogleNotebooks method start.
public void start(InstanceName instanceName) {
try {
Operation startOperation = notebooks.instances().start(instanceName).execute();
pollForSuccess(startOperation, "Error starting notebook instance: ");
} catch (InterruptedException | IOException e) {
checkFor409BadState(e);
throw new SystemException("Error starting notebook instance", e);
}
}
use of com.google.api.services.serviceusage.v1beta1.model.Operation in project terra-cloud-resource-lib by DataBiosphere.
the class ProjectUtils method executeCreateProject.
/**
* Creates a new Google Project in GCP for testing.
*/
public static Project executeCreateProject() throws Exception {
Project project = new Project().setProjectId(randomProjectId()).setParent(PARENT_RESOURCE);
Operation operation = getManagerCow().projects().create(project).execute();
OperationCow<Operation> operationCow = managerCow.operations().operationCow(operation);
OperationTestUtils.pollAndAssertSuccess(operationCow, Duration.ofSeconds(5), Duration.ofSeconds(60));
return managerCow.projects().get(project.getProjectId()).execute();
}
use of com.google.api.services.serviceusage.v1beta1.model.Operation in project terra-cloud-resource-lib by DataBiosphere.
the class AIPlatformNotebooksCowTest method createGetListDeleteNotebookInstance.
@Test
public void createGetListDeleteNotebookInstance() throws Exception {
InstanceName instanceName = defaultInstanceName().build();
createInstance(instanceName);
Instance retrievedInstance = notebooks.instances().get(instanceName).execute();
assertEquals(instanceName.formatName(), retrievedInstance.getName());
ListInstancesResponse listResponse = notebooks.instances().list(instanceName.formatParent()).execute();
// There may be other notebook instances from other tests.
assertThat(listResponse.getInstances().size(), Matchers.greaterThan(0));
assertThat(listResponse.getInstances().stream().map(Instance::getName).collect(Collectors.toList()), Matchers.hasItem(instanceName.formatName()));
OperationCow<Operation> deleteOperation = notebooks.operations().operationCow(notebooks.instances().delete(instanceName).execute());
OperationTestUtils.pollAndAssertSuccess(deleteOperation, Duration.ofSeconds(30), Duration.ofMinutes(5));
GoogleJsonResponseException e = assertThrows(GoogleJsonResponseException.class, () -> notebooks.instances().get(instanceName).execute());
assertEquals(404, e.getStatusCode());
}
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