Examples with DataType com.ibm.j9ddr.vm29.j9.DataType used on opensource projects

Example 21 with DataType

use of com.ibm.j9ddr.vm29.j9.DataType in project ma-core-public by infiniteautomation.

the class SetPointEventHandlerDefinition method commonValidation.

private void commonValidation(ProcessResult response, SetPointEventHandlerVO vo) {
    DataPointVO dp = DataPointDao.getInstance().get(vo.getTargetPointId());
    DataType dataType = null;
    if (dp == null)
        response.addContextualMessage("targetPointId", "eventHandlers.noTargetPoint");
    else {
        dataType = dp.getPointLocator().getDataType();
        if (!dp.getPointLocator().isSettable())
            response.addContextualMessage("targetPointId", "event.setPoint.targetNotSettable");
    }
    if (vo.getActiveAction() == SetPointEventHandlerVO.SET_ACTION_NONE && vo.getInactiveAction() == SetPointEventHandlerVO.SET_ACTION_NONE) {
        response.addContextualMessage("activeAction", "eventHandlers.noSetPointAction");
        response.addContextualMessage("inactiveAction", "eventHandlers.noSetPointAction");
    }
    MangoJavaScriptService javaScriptService = Common.getBean(MangoJavaScriptService.class);
    // Active
    if (vo.getActiveAction() == SetPointEventHandlerVO.SET_ACTION_STATIC_VALUE && dataType == DataType.MULTISTATE) {
        try {
            Integer.parseInt(vo.getActiveValueToSet());
        } catch (NumberFormatException e) {
            response.addContextualMessage("activeValueToSet", "eventHandlers.invalidActiveValue");
        }
    } else if (vo.getActiveAction() == SetPointEventHandlerVO.SET_ACTION_STATIC_VALUE && dataType == DataType.NUMERIC) {
        try {
            Double.parseDouble(vo.getActiveValueToSet());
        } catch (NumberFormatException e) {
            response.addContextualMessage("activeValueToSet", "eventHandlers.invalidActiveValue");
        }
    } else if (vo.getActiveAction() == SetPointEventHandlerVO.SET_ACTION_POINT_VALUE) {
        DataPointVO dpActive = DataPointDao.getInstance().get(vo.getActivePointId());
        if (dpActive == null)
            response.addContextualMessage("activePointId", "eventHandlers.invalidActiveSource");
        else if (dataType != dpActive.getPointLocator().getDataType())
            response.addContextualMessage("activeDataPointId", "eventHandlers.invalidActiveSourceType");
    } else if (vo.getActiveAction() == SetPointEventHandlerVO.SET_ACTION_SCRIPT_VALUE) {
        if (StringUtils.isEmpty(vo.getActiveScript())) {
            response.addContextualMessage("activeScript", "eventHandlers.invalidActiveScript");
        } else {
            try {
                javaScriptService.compile(vo.getActiveScript(), true);
            } catch (ScriptError e) {
                response.addContextualMessage("activeScript", "eventHandlers.invalidActiveScriptError", e.getTranslatableMessage());
            }
        }
    }
    // Inactive
    if (vo.getInactiveAction() == SetPointEventHandlerVO.SET_ACTION_STATIC_VALUE && dataType == DataType.MULTISTATE) {
        try {
            Integer.parseInt(vo.getInactiveValueToSet());
        } catch (NumberFormatException e) {
            response.addContextualMessage("inactiveValueToSet", "eventHandlers.invalidInactiveValue");
        }
    } else if (vo.getInactiveAction() == SetPointEventHandlerVO.SET_ACTION_STATIC_VALUE && dataType == DataType.NUMERIC) {
        try {
            Double.parseDouble(vo.getInactiveValueToSet());
        } catch (NumberFormatException e) {
            response.addContextualMessage("inactiveValueToSet", "eventHandlers.invalidInactiveValue");
        }
    } else if (vo.getInactiveAction() == SetPointEventHandlerVO.SET_ACTION_POINT_VALUE) {
        DataPointVO dpInactive = DataPointDao.getInstance().get(vo.getInactivePointId());
        if (dpInactive == null)
            response.addContextualMessage("inactivePointId", "eventHandlers.invalidInactiveSource");
        else if (dataType != dpInactive.getPointLocator().getDataType())
            response.addContextualMessage("inactivePointId", "eventHandlers.invalidInactiveSourceType");
    } else if (vo.getInactiveAction() == SetPointEventHandlerVO.SET_ACTION_SCRIPT_VALUE) {
        if (StringUtils.isEmpty(vo.getInactiveScript())) {
            response.addContextualMessage("inactiveScript", "eventHandlers.invalidInactiveScript");
        } else {
            try {
                javaScriptService.compile(vo.getInactiveScript(), true);
            } catch (ScriptError e) {
                response.addContextualMessage("inactiveScript", "eventHandlers.invalidActiveScriptError", e.getTranslatableMessage());
            }
        }
    }
    if (vo.getAdditionalContext() != null)
        validateScriptContext(vo.getAdditionalContext(), response);
    else
        vo.setAdditionalContext(new ArrayList<>());
}

Example 22 with DataType

use of com.ibm.j9ddr.vm29.j9.DataType in project openj9 by eclipse-openj9.

the class StructurePointer method getStructureFields.

public StructureField[] getStructureFields() {
    List<StructureField> fields = new LinkedList<StructureField>();
    Class<?> working = this.getClass();
    while (working != null) {
        GeneratedPointerClass classAnnotation = working.getAnnotation(GeneratedPointerClass.class);
        if (null == classAnnotation) {
            break;
        }
        for (Method thisMethod : working.getMethods()) {
            if (thisMethod.isAnnotationPresent(GeneratedFieldAccessor.class)) {
                GeneratedFieldAccessor fieldAnnotation = thisMethod.getAnnotation(GeneratedFieldAccessor.class);
                Field offsetField = null;
                try {
                    offsetField = classAnnotation.structureClass().getField(fieldAnnotation.offsetFieldName());
                } catch (SecurityException e) {
                    throw new Error("Unexpected security exception", e);
                } catch (NoSuchFieldException e) {
                    // This will happen if we reach for a field that doesn't exist on this level
                    continue;
                }
                int offset = -1;
                try {
                    offset = offsetField.getInt(null);
                } catch (Exception e) {
                    throw new Error(e);
                }
                DataType result = null;
                CorruptDataException cde = null;
                try {
                    result = (DataType) thisMethod.invoke(this);
                } catch (IllegalArgumentException e) {
                    throw new RuntimeException(e);
                } catch (IllegalAccessException e) {
                    throw new RuntimeException(e);
                } catch (InvocationTargetException e) {
                    Throwable cause = e.getCause();
                    if (cause instanceof CorruptDataException) {
                        cde = (CorruptDataException) cause;
                    } else {
                        throw new RuntimeException(e);
                    }
                }
                fields.add(new StructureField(thisMethod.getName(), fieldAnnotation.declaredType(), offset, result, cde));
            }
        }
        working = working.getSuperclass();
    }
    Collections.sort(fields);
    StructureField[] result = new StructureField[fields.size()];
    fields.toArray(result);
    return result;
}

Example 23 with DataType

use of com.ibm.j9ddr.vm29.j9.DataType in project openj9 by eclipse.

the class StructurePointer method getStructureFields.

public StructureField[] getStructureFields() {
    List<StructureField> fields = new LinkedList<StructureField>();
    Class<?> working = this.getClass();
    while (working != null) {
        GeneratedPointerClass classAnnotation = working.getAnnotation(GeneratedPointerClass.class);
        if (null == classAnnotation) {
            break;
        }
        for (Method thisMethod : working.getMethods()) {
            if (thisMethod.isAnnotationPresent(GeneratedFieldAccessor.class)) {
                GeneratedFieldAccessor fieldAnnotation = thisMethod.getAnnotation(GeneratedFieldAccessor.class);
                Field offsetField = null;
                try {
                    offsetField = classAnnotation.structureClass().getField(fieldAnnotation.offsetFieldName());
                } catch (SecurityException e) {
                    throw new Error("Unexpected security exception", e);
                } catch (NoSuchFieldException e) {
                    // This will happen if we reach for a field that doesn't exist on this level
                    continue;
                }
                int offset = -1;
                try {
                    offset = offsetField.getInt(null);
                } catch (Exception e) {
                    throw new Error(e);
                }
                DataType result = null;
                CorruptDataException cde = null;
                try {
                    result = (DataType) thisMethod.invoke(this);
                } catch (IllegalArgumentException e) {
                    throw new RuntimeException(e);
                } catch (IllegalAccessException e) {
                    throw new RuntimeException(e);
                } catch (InvocationTargetException e) {
                    Throwable cause = e.getCause();
                    if (cause instanceof CorruptDataException) {
                        cde = (CorruptDataException) cause;
                    } else {
                        throw new RuntimeException(e);
                    }
                }
                fields.add(new StructureField(thisMethod.getName(), fieldAnnotation.declaredType(), offset, result, cde));
            }
        }
        working = working.getSuperclass();
    }
    Collections.sort(fields);
    StructureField[] result = new StructureField[fields.size()];
    fields.toArray(result);
    return result;
}

Example 24 with DataType

use of com.ibm.j9ddr.vm29.j9.DataType in project imageio-ext by geosolutions-it.

the class NetCDFUtilities method isVariableAccepted.

/**
 * NetCDF files may contains a wide set of variables. Some of them are
 * unuseful for our purposes. The method returns {@code true} if the
 * specified variable is accepted.
 */
public static boolean isVariableAccepted(final Variable var, final CheckType checkType) {
    if (var instanceof CoordinateAxis1D) {
        return false;
    } else if (checkType == CheckType.NOSCALARS) {
        List<Dimension> dimensions = var.getDimensions();
        if (dimensions.size() < 2) {
            return false;
        }
        DataType dataType = var.getDataType();
        if (dataType == DataType.CHAR) {
            return false;
        }
        return isVariableAccepted(var.getName(), CheckType.NONE);
    } else if (checkType == CheckType.ONLYGEOGRIDS) {
        List<Dimension> dimensions = var.getDimensions();
        if (dimensions.size() < 2) {
            return false;
        }
        for (Dimension dimension : dimensions) {
            String dimName = dimension.getName();
            // check the dimension to be defined
            Group group = dimension.getGroup();
            Variable dimVariable = group.findVariable(dimName);
            if (dimVariable == null) {
                return false;
            }
            if (dimVariable instanceof CoordinateAxis1D) {
                CoordinateAxis1D axis = (CoordinateAxis1D) dimVariable;
                AxisType axisType = axis.getAxisType();
                if (axisType == null) {
                    return false;
                }
            }
        }
        DataType dataType = var.getDataType();
        if (dataType == DataType.CHAR) {
            return false;
        }
        return isVariableAccepted(var.getName(), CheckType.NONE);
    } else
        return isVariableAccepted(var.getName(), checkType);
}

Example 25 with DataType

use of com.ibm.j9ddr.vm29.j9.DataType in project imageio-ext by geosolutions-it.

the class INGVConverter method run.

private void run(String fileNameIn, String fileNameOut) {
    try {
        final File fileIn = new File(fileNameIn);
        final NetcdfFile ncFileIn = NetcdfFile.open(fileNameIn);
        final File fileOut = new File(fileNameOut);
        // keep original name
        final File outputFile = File.createTempFile(fileIn.getName(), ".tmp");
        final NetcdfFileWriteable ncFileOut = NetcdfFileWriteable.createNew(outputFile.getAbsolutePath());
        boolean hasDepth = false;
        // input dimensions
        String timeName = "time_counter";
        Dimension timeOriginalDim = ncFileIn.findDimension(timeName);
        if (timeOriginalDim == null) {
            timeOriginalDim = ncFileIn.findDimension("time");
            timeName = "time";
        }
        final Dimension yDim = ncFileIn.findDimension("y");
        final Dimension xDim = ncFileIn.findDimension("x");
        // input VARIABLES
        final Variable timeOriginalVar = ncFileIn.findVariable(timeName);
        final Array timeOriginalData = timeOriginalVar.read();
        final DataType timeDataType = timeOriginalVar.getDataType();
        final Variable navLat = ncFileIn.findVariable(NAV_LAT);
        final DataType navLatDataType = navLat.getDataType();
        final Variable navLon = ncFileIn.findVariable(NAV_LON);
        final DataType navLonDataType = navLon.getDataType();
        final int nLat = yDim.getLength();
        final int nLon = xDim.getLength();
        final int nTimes = timeOriginalDim.getLength();
        final Array latOriginalData = navLat.read("0:" + (nLat - 1) + ":1, 0:0:1").reduce();
        final Array lonOriginalData = navLon.read("0:0:1, 0:" + (nLon - 1) + ":1").reduce();
        // //
        // 
        // Depth related vars
        // 
        // //
        Array depthOriginalData = null;
        DataType depthDataType = null;
        int nDepths = 0;
        Array depthDestData = null;
        Dimension depthDim = null;
        String depthName = "depth";
        Variable depthOriginalVar = null;
        int dName = 0;
        while (depthOriginalVar == null) {
            if (dName == depthNames.length)
                break;
            String name = depthNames[dName++];
            // Depth
            depthOriginalVar = ncFileIn.findVariable(name);
        }
        if (depthOriginalVar != null) {
            depthName = depthNames[dName - 1];
            nDepths = depthOriginalVar.getDimension(0).getLength();
            depthOriginalData = depthOriginalVar.read();
            hasDepth = true;
        }
        Dimension timeDim = ncFileOut.addDimension("time", nTimes);
        Dimension latDim = ncFileOut.addDimension(NetCDFUtilities.LAT, nLat);
        Dimension lonDim = ncFileOut.addDimension(NetCDFUtilities.LON, nLon);
        if (hasDepth)
            depthDim = ncFileOut.addDimension(NetCDFUtilities.DEPTH, nDepths);
        // writing file
        NetCDFConverterUtilities.copyGlobalAttributes(ncFileOut, ncFileIn.getGlobalAttributes());
        // //
        // 
        // Time requires a special Management
        // 
        // //
        // time Variable
        Variable timeVar = ncFileOut.addVariable(NetCDFUtilities.TIME, timeDataType, new Dimension[] { timeDim });
        NetCDFConverterUtilities.setVariableAttributes(timeOriginalVar, ncFileOut, NetCDFUtilities.TIME);
        // Dimensions
        ncFileOut.addVariable(NetCDFUtilities.LAT, navLatDataType, new Dimension[] { latDim });
        NetCDFConverterUtilities.setVariableAttributes(navLat, ncFileOut, NetCDFUtilities.LAT);
        ncFileOut.addVariable(NetCDFUtilities.LON, navLonDataType, new Dimension[] { lonDim });
        NetCDFConverterUtilities.setVariableAttributes(navLon, ncFileOut, NetCDFUtilities.LON);
        Array lat1Data = NetCDFConverterUtilities.getArray(nLat, navLatDataType);
        NetCDFConverterUtilities.setData1D(latOriginalData, lat1Data, navLatDataType, nLat, true);
        // lon Variable
        Array lon1Data = NetCDFConverterUtilities.getArray(nLon, navLonDataType);
        NetCDFConverterUtilities.setData1D(lonOriginalData, lon1Data, navLonDataType, nLon, false);
        if (hasDepth) {
            depthDataType = depthOriginalVar.getDataType();
            ncFileOut.addVariable(NetCDFUtilities.DEPTH, depthDataType, new Dimension[] { depthDim });
            NetCDFConverterUtilities.setVariableAttributes(depthOriginalVar, ncFileOut, NetCDFUtilities.DEPTH);
        }
        if (hasDepth) {
            // depth level Variable
            depthDestData = NetCDFConverterUtilities.getArray(nDepths, depthDataType);
            NetCDFConverterUtilities.setData1D(depthOriginalData, depthDestData, depthDataType, nDepths, false);
        }
        // {} Variables
        final ArrayList<String> variables = new ArrayList<String>(5);
        final HashMap<String, String> updatingValidRange = new HashMap<String, String>(5);
        final HashMap<String, String> updatingFilLValue = new HashMap<String, String>(5);
        int numVars = 0;
        for (int i = 0; i < NUMVARS; i++) {
            String varName = (String) VARIABLES.get(i);
            Variable var = ncFileIn.findVariable(varName);
            if (var != null) {
                variables.add(varName);
                boolean hasLocalDepth = NetCDFConverterUtilities.hasThisDimension(var, depthName);
                if (hasDepth && hasLocalDepth)
                    ncFileOut.addVariable(varName, var.getDataType(), new Dimension[] { timeDim, depthDim, latDim, lonDim });
                else
                    ncFileOut.addVariable(varName, var.getDataType(), new Dimension[] { timeDim, latDim, lonDim });
                // //
                // 
                // Check for updating valid range
                // 
                // //
                boolean hasMinMax = false;
                Attribute validMax = var.findAttribute(NetCDFUtilities.DatasetAttribs.VALID_MAX);
                Attribute validMin = var.findAttribute(NetCDFUtilities.DatasetAttribs.VALID_MIN);
                Attribute fillValue = var.findAttribute(NetCDFUtilities.DatasetAttribs.FILL_VALUE);
                boolean hasMissingValue = false;
                boolean hasFillValue = true;
                if (fillValue == null) {
                    hasFillValue = false;
                    fillValue = var.findAttribute(NetCDFUtilities.DatasetAttribs.MISSING_VALUE);
                    if (fillValue != null)
                        hasMissingValue = true;
                }
                Attribute validRange = var.findAttribute(NetCDFUtilities.DatasetAttribs.VALID_RANGE);
                boolean hasValidRange = false;
                boolean rewriteAttribute = false;
                if (validMin != null && validMax != null && fillValue != null) {
                    rewriteAttribute = !NetCDFConverterUtilities.isFillValueOutsideValidRange(validMax, validMin, fillValue, var.getDataType());
                    hasMinMax = true;
                } else if (validRange != null && fillValue != null) {
                    rewriteAttribute = !NetCDFConverterUtilities.isFillValueOutsideValidRange(validRange, fillValue, var.getDataType());
                    hasValidRange = true;
                } else {
                    rewriteAttribute = true;
                }
                if (rewriteAttribute) {
                    updatingValidRange.put(varName, "");
                    DataType varDatatype = var.getDataType();
                    Array range = NetCDFConverterUtilities.getRangeArray(varDatatype);
                    ncFileOut.addVariableAttribute(varName, NetCDFUtilities.DatasetAttribs.VALID_RANGE, range);
                    if (hasMissingValue && !hasFillValue) {
                        updatingFilLValue.put(varName, "");
                        Number fillVal = NetCDFConverterUtilities.getNumber(varDatatype);
                        ncFileOut.addVariableAttribute(varName, NetCDFUtilities.DatasetAttribs.FILL_VALUE, fillVal);
                    }
                }
                String[] exceptions = null;
                if (hasMinMax) {
                    if (hasMissingValue)
                        exceptions = new String[] { NetCDFUtilities.DatasetAttribs.VALID_MAX, NetCDFUtilities.DatasetAttribs.VALID_MIN, NetCDFUtilities.DatasetAttribs.MISSING_VALUE };
                    else
                        exceptions = new String[] { NetCDFUtilities.DatasetAttribs.VALID_MAX, NetCDFUtilities.DatasetAttribs.VALID_MIN };
                } else if (hasValidRange) {
                    if (hasMissingValue)
                        exceptions = new String[] { NetCDFUtilities.DatasetAttribs.VALID_RANGE, NetCDFUtilities.DatasetAttribs.MISSING_VALUE };
                    else
                        exceptions = new String[] { NetCDFUtilities.DatasetAttribs.VALID_RANGE };
                } else if (hasMissingValue)
                    exceptions = new String[] { NetCDFUtilities.DatasetAttribs.MISSING_VALUE };
                NetCDFConverterUtilities.setVariableAttributes(var, ncFileOut, exceptions);
                numVars++;
            }
        }
        // writing bin data ...
        ncFileOut.create();
        Array timeData = NetCDFConverterUtilities.getArray(nTimes, timeDataType);
        NetCDFConverterUtilities.setData1D(timeOriginalData, timeData, timeDataType, nTimes, false);
        ncFileOut.write("time", timeData);
        timeVar = ncFileOut.findVariable("time");
        timeDim.addCoordinateVariable(timeVar);
        ncFileOut.write(NetCDFUtilities.LAT, lat1Data);
        ncFileOut.write(NetCDFUtilities.LON, lon1Data);
        if (hasDepth) {
            Variable depthVar = ncFileOut.findVariable("depth");
            depthDim.addCoordinateVariable(depthVar);
            ncFileOut.write(NetCDFUtilities.DEPTH, depthDestData);
        }
        for (int i = 0; i < numVars; i++) {
            String varName = (String) variables.get(i);
            Variable var = ncFileIn.findVariable(varName);
            final boolean hasLocalDepth = NetCDFConverterUtilities.hasThisDimension(var, depthName);
            Array originalVarArray = var.read();
            DataType varDataType = var.getDataType();
            Array destArray = null;
            int[] dimensions = null;
            final boolean setDepth = hasDepth && hasLocalDepth;
            if (setDepth) {
                dimensions = new int[] { timeDim.getLength(), depthDim.getLength(), latDim.getLength(), lonDim.getLength() };
            } else {
                dimensions = new int[] { timeDim.getLength(), latDim.getLength(), lonDim.getLength() };
            }
            destArray = NetCDFConverterUtilities.getArray(dimensions, varDataType);
            boolean findNewRange = updatingValidRange.containsKey(varName);
            boolean updateFillValue = updatingFilLValue.containsKey(varName);
            final int[] loopLengths;
            if (setDepth)
                loopLengths = new int[] { nTimes, nDepths, nLat, nLon };
            else
                loopLengths = new int[] { nTimes, nLat, nLon };
            NetCDFConverterUtilities.writeData(ncFileOut, varName, var, originalVarArray, destArray, findNewRange, updateFillValue, loopLengths, true);
        }
        ncFileOut.close();
        outputFile.renameTo(fileOut);
    } catch (Exception e) {
        // something bad happened
        if (NetCDFConverterUtilities.LOGGER.isLoggable(Level.INFO))
            NetCDFConverterUtilities.LOGGER.log(Level.INFO, e.getLocalizedMessage(), e);
    }
}