use of com.palantir.atlasdb.keyvalue.api.CandidateCellForSweepingRequest in project atlasdb by palantir.
the class SweepTaskRunner method doRun.
private SweepResults doRun(TableReference tableRef, SweepBatchConfig batchConfig, byte[] startRow, RunType runType, Sweeper sweeper) {
Stopwatch watch = Stopwatch.createStarted();
long timeSweepStarted = System.currentTimeMillis();
log.info("Beginning iteration of sweep for table {} starting at row {}", LoggingArgs.tableRef(tableRef), UnsafeArg.of("startRow", PtBytes.encodeHexString(startRow)));
// Earliest start timestamp of any currently open transaction, with two caveats:
// (1) unreadableTimestamps are calculated via wall-clock time, and so may not be correct
// under pathological clock conditions
// (2) immutableTimestamps do not account for locks have timed out after checking their locks;
// such a transaction may have a start timestamp less than the immutableTimestamp, and it
// could still get successfully committed (its commit timestamp may or may not be less than
// the immutableTimestamp
// Note that this is fine, because we'll either
// (1) force old readers to abort (if they read a garbage collection sentinel), or
// (2) force old writers to retry (note that we must roll back any uncommitted transactions that
// we encounter
long sweepTs = sweeper.getSweepTimestampSupplier().getSweepTimestamp(unreadableTimestampSupplier, immutableTimestampSupplier);
CandidateCellForSweepingRequest request = ImmutableCandidateCellForSweepingRequest.builder().startRowInclusive(startRow).batchSizeHint(batchConfig.candidateBatchSize()).maxTimestampExclusive(sweepTs).shouldCheckIfLatestValueIsEmpty(sweeper.shouldSweepLastCommitted()).shouldDeleteGarbageCollectionSentinels(!sweeper.shouldAddSentinels()).build();
SweepableCellFilter sweepableCellFilter = new SweepableCellFilter(transactionService, sweeper, sweepTs);
try (ClosableIterator<List<CandidateCellForSweeping>> candidates = keyValueService.getCandidateCellsForSweeping(tableRef, request)) {
ExaminedCellLimit limit = new ExaminedCellLimit(startRow, batchConfig.maxCellTsPairsToExamine());
Iterator<BatchOfCellsToSweep> batchesToSweep = getBatchesToSweep(candidates, batchConfig, sweepableCellFilter, limit);
long totalCellTsPairsExamined = 0;
long totalCellTsPairsDeleted = 0;
metricsManager.ifPresent(SweepMetricsManager::resetBeforeDeleteBatch);
byte[] lastRow = startRow;
while (batchesToSweep.hasNext()) {
BatchOfCellsToSweep batch = batchesToSweep.next();
/*
* At this point cells were merged in batches of at least deleteBatchSize blocks per batch. Therefore we
* expect most batches to have slightly more than deleteBatchSize blocks. Partitioning such batches with
* deleteBatchSize as a limit results in a small second batch, which is bad for performance reasons.
* Therefore, deleteBatchSize is doubled.
*/
long cellsDeleted = sweepBatch(tableRef, batch.cells(), runType, 2 * batchConfig.deleteBatchSize());
totalCellTsPairsDeleted += cellsDeleted;
long cellsExamined = batch.numCellTsPairsExamined();
totalCellTsPairsExamined += cellsExamined;
metricsManager.ifPresent(manager -> manager.updateAfterDeleteBatch(cellsExamined, cellsDeleted));
lastRow = batch.lastCellExamined().getRowName();
}
return SweepResults.builder().previousStartRow(Optional.of(startRow)).nextStartRow(Arrays.equals(startRow, lastRow) ? Optional.empty() : Optional.of(lastRow)).cellTsPairsExamined(totalCellTsPairsExamined).staleValuesDeleted(totalCellTsPairsDeleted).minSweptTimestamp(sweepTs).timeInMillis(watch.elapsed(TimeUnit.MILLISECONDS)).timeSweepStarted(timeSweepStarted).build();
}
}
use of com.palantir.atlasdb.keyvalue.api.CandidateCellForSweepingRequest in project atlasdb by palantir.
the class KvsGetCandidateCellsForSweepingBenchmarks method fullTableScan.
private int fullTableScan(TableReference tableRef, KeyValueService kvs, int numCellsExpected, boolean thorough) {
CandidateCellForSweepingRequest request = ImmutableCandidateCellForSweepingRequest.builder().startRowInclusive(PtBytes.EMPTY_BYTE_ARRAY).batchSizeHint(1000).maxTimestampExclusive(Long.MAX_VALUE).shouldCheckIfLatestValueIsEmpty(thorough).shouldDeleteGarbageCollectionSentinels(thorough).build();
try (ClosableIterator<List<CandidateCellForSweeping>> iter = kvs.getCandidateCellsForSweeping(tableRef, request)) {
int numCandidates = Iterators.size(Iterators.concat(Iterators.transform(iter, List::iterator)));
Preconditions.checkState(numCandidates == numCellsExpected, "Number of candidates %s != %s", numCandidates, numCellsExpected);
return numCandidates;
}
}
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