Examples with IndexFactory de.lmu.ifi.dbs.elki.index.IndexFactory used on opensource projects

Example 1 with IndexFactory

use of de.lmu.ifi.dbs.elki.index.IndexFactory in project elki by elki-project.

the class StaticArrayDatabase method initialize.

/**
 * Initialize the database by getting the initial data from the database
 * connection.
 */
@Override
public void initialize() {
    if (databaseConnection != null) {
        if (LOG.isDebugging()) {
            LOG.debugFine("Loading data from database connection.");
        }
        MultipleObjectsBundle bundle = databaseConnection.loadData();
        // Run at most once.
        databaseConnection = null;
        // Find DBIDs for bundle
        {
            DBIDs bids = bundle.getDBIDs();
            if (bids instanceof ArrayStaticDBIDs) {
                this.ids = (ArrayStaticDBIDs) bids;
            } else if (bids == null) {
                this.ids = DBIDUtil.generateStaticDBIDRange(bundle.dataLength());
            } else {
                this.ids = (ArrayStaticDBIDs) DBIDUtil.makeUnmodifiable(bids);
            }
        }
        // Replace id representation (it would be nicer if we would not need
        // DBIDView at all)
        this.idrep = new DBIDView(this.ids);
        relations.add(this.idrep);
        getHierarchy().add(this, idrep);
        DBIDArrayIter it = this.ids.iter();
        int numrel = bundle.metaLength();
        for (int i = 0; i < numrel; i++) {
            SimpleTypeInformation<?> meta = bundle.meta(i);
            @SuppressWarnings("unchecked") SimpleTypeInformation<Object> ometa = (SimpleTypeInformation<Object>) meta;
            WritableDataStore<Object> store = DataStoreUtil.makeStorage(ids, DataStoreFactory.HINT_DB, ometa.getRestrictionClass());
            for (it.seek(0); it.valid(); it.advance()) {
                store.put(it, bundle.data(it.getOffset(), i));
            }
            Relation<?> relation = new MaterializedRelation<>(ometa, ids, null, store);
            relations.add(relation);
            getHierarchy().add(this, relation);
            // Try to add indexes where appropriate
            for (IndexFactory<?, ?> factory : indexFactories) {
                if (factory.getInputTypeRestriction().isAssignableFromType(ometa)) {
                    @SuppressWarnings("unchecked") final IndexFactory<Object, ?> ofact = (IndexFactory<Object, ?>) factory;
                    @SuppressWarnings("unchecked") final Relation<Object> orep = (Relation<Object>) relation;
                    final Index index = ofact.instantiate(orep);
                    Duration duration = LOG.isStatistics() ? LOG.newDuration(index.getClass().getName() + ".construction").begin() : null;
                    index.initialize();
                    if (duration != null) {
                        LOG.statistics(duration.end());
                    }
                    getHierarchy().add(relation, index);
                }
            }
        }
        // fire insertion event
        eventManager.fireObjectsInserted(ids);
    }
}

Example 2 with IndexFactory

use of de.lmu.ifi.dbs.elki.index.IndexFactory in project elki by elki-project.

the class HashmapDatabase method addNewRelation.

/**
 * Add a new representation for the given meta.
 *
 * @param meta meta data
 * @return new representation
 */
private Relation<?> addNewRelation(SimpleTypeInformation<?> meta) {
    @SuppressWarnings("unchecked") SimpleTypeInformation<Object> ometa = (SimpleTypeInformation<Object>) meta;
    Relation<?> relation = new MaterializedRelation<>(ometa, ids);
    relations.add(relation);
    getHierarchy().add(this, relation);
    // Try to add indexes where appropriate
    for (IndexFactory<?, ?> factory : indexFactories) {
        if (factory.getInputTypeRestriction().isAssignableFromType(meta)) {
            @SuppressWarnings("unchecked") final IndexFactory<Object, ?> ofact = (IndexFactory<Object, ?>) factory;
            @SuppressWarnings("unchecked") final Relation<Object> orep = (Relation<Object>) relation;
            Index index = ofact.instantiate(orep);
            index.initialize();
            getHierarchy().add(relation, index);
        }
    }
    return relation;
}