Examples with RandomLocalTreeVariable dr.evomodel.tree.randomlocalmodel.RandomLocalTreeVariable used on opensource projects

Example 1 with RandomLocalTreeVariable

use of dr.evomodel.tree.randomlocalmodel.RandomLocalTreeVariable in project beast-mcmc by beast-dev.

the class RLTVLoggerParser method parseXMLObject.

public Object parseXMLObject(XMLObject xo) throws XMLParseException {
    TreeModel treeModel = (TreeModel) xo.getChild(TreeModel.class);
    RandomLocalTreeVariable randomLocal = (RandomLocalTreeVariable) xo.getChild(RandomLocalTreeVariable.class);
    String fileName = xo.getStringAttribute(FILENAME);
    int logEvery = xo.getIntegerAttribute(LOG_EVERY);
    TabDelimitedFormatter formatter = null;
    try {
        formatter = new TabDelimitedFormatter(new PrintWriter(new FileWriter(fileName)));
    } catch (IOException e) {
        e.printStackTrace();
    }
    return new RLTVLogger(formatter, logEvery, treeModel, randomLocal);
}